Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 8.0e-181 637.1 353 100.0
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 7.1e-113 411.4 354 71.2
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 1.1e-49 201.4 360 46.9
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 3.8e-42 176.4 382 42.9
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 6.6e-42 175.6 352 41.8
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 3.3e-33 146.7 285 39.6
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 3.1e-31 140.2 355 37.5
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 2.1e-24 117.5 360 35.0
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.2e-19 101.7 446 32.3
MSTRG.7455 Avicennia marina HOM05D012266 ORTHO05D011876 7.8e-19 99.0 354 31.6
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.3e-18 98.2 336 33.9
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 5.1e-18 96.3 478 28.0
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 7.3e-17 92.4 329 31.9
SGA_v2.0_scaffold123G33463 Striga asiatica HOM05D012266 ORTHO05D011876 1.6e-16 91.3 305 36.7
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 2.8e-16 90.5 370 33.2
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 2.8e-16 90.5 383 33.7
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.1e-15 88.6 370 30.5
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 2.6e-14 84.0 397 33.8
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 5.8e-14 82.8 430 30.2
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 6.4e-13 79.3 382 30.1
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 1.4e-12 78.2 401 32.9
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 1.9e-12 77.8 380 27.1
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 3.2e-12 77.0 277 36.8
Sopen03g001860 Solanum pennellii HOM05D012094 ORTHO05D011876 4.1e-12 76.6 327 30.0
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 9.2e-12 75.5 428 29.7
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 1.2e-11 75.1 374 28.1
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.6e-11 74.7 281 32.0
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 2.1e-11 74.3 356 30.9
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 3.5e-11 73.6 369 30.1
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 3.5e-11 73.6 379 27.4
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 7.8e-11 72.4 374 29.7
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 6.6e-10 69.3 193 32.1
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 8.7e-10 68.9 127 40.9
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 1.1e-09 68.6 271 34.3
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.5e-09 68.2 127 40.9
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 1.9e-09 67.8 379 29.0
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 4.3e-09 66.6 332 26.8
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 9.6e-09 65.5 357 30.8
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 9.6e-09 65.5 367 27.5
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.2e-08 65.1 375 31.2
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.2e-08 65.1 376 26.3
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.6e-08 64.7 336 27.7
ECA248G0823 Erigeron canadensis HOM05D038653 ORTHO05D020580 2.1e-08 64.3 373 30.0
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 3.6e-08 63.5 330 28.2
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 3.6e-08 63.5 336 27.7
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 3.6e-08 63.5 161 33.5
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 4.7e-08 63.2 239 29.7
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.7e-08 63.2 376 26.1
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.8e-07 61.2 189 31.2
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 3.1e-07 60.5 407 31.0
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 3.1e-07 60.5 365 31.8
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 4.0e-07 60.1 405 28.1
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 4.0e-07 60.1 366 29.8
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 6.9e-07 59.3 360 30.0
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 6.9e-07 59.3 143 32.9
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.5e-06 58.2 368 28.8
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 2.0e-06 57.8 331 28.1
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 2.0e-06 57.8 364 26.4
Peaxi162Scf00653g00416 Petunia axillaris HOM05D012094 ORTHO05D011876 4.4e-06 56.6 315 27.3
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.4e-06 56.6 371 28.3
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 7.6e-06 55.8 310 26.1


User provided reference genes

Program Settings