Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 1.3e-280 969.1 498 100.0
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.2e-172 610.5 503 66.2
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 2.3e-171 606.3 502 67.5
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 3.4e-167 592.4 502 65.9
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 5.7e-167 591.7 502 64.7
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 3.2e-165 585.9 502 65.3
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.4e-160 570.5 502 62.2
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 4.0e-160 568.9 500 62.6
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 2.9e-158 562.8 501 62.5
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.9e-158 562.8 502 60.4
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 5.4e-157 558.5 502 62.4
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 5.0e-155 552.0 521 61.8
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.2e-153 547.4 502 62.4
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.1e-152 544.3 501 60.3
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 3.4e-151 539.3 501 60.7
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 5.4e-149 531.9 503 60.8
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 1.2e-148 530.8 501 59.5
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 2.1e-148 530.0 504 59.5
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 4.6e-148 528.9 505 60.2
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 6.6e-147 525.0 501 58.7
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 1.5e-146 523.9 551 55.0
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 1.5e-146 523.9 503 59.8
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 4.3e-146 522.3 502 59.0
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 2.1e-145 520.0 522 56.3
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 2.8e-145 519.6 495 58.0
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.1e-144 517.7 504 58.7
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.6e-143 513.1 503 58.8
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 4.4e-143 512.3 503 58.6
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.3e-142 510.8 503 57.9
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 4.1e-141 505.8 501 57.3
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 4.6e-140 502.3 507 58.6
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 3.9e-139 499.2 507 58.4
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 8.7e-139 498.0 502 57.4
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.5e-138 497.3 502 57.8
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 7.3e-138 495.0 500 57.4
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 1.2e-137 494.2 503 57.1
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 1.6e-137 493.8 503 56.9
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 3.6e-137 492.7 506 58.3
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 2.6e-135 486.5 505 57.0
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.8e-135 485.3 563 52.4
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.7e-134 483.8 563 52.2
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 3.8e-134 482.6 477 62.9
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.4e-134 481.5 564 52.3
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 7.8e-132 474.9 521 54.5
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.3e-130 469.2 505 55.8
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 4.3e-130 469.2 504 55.0
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 5.3e-128 462.2 500 55.0
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 3.4e-127 459.5 507 56.0
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 1.7e-126 457.2 501 55.5
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 8.4e-126 454.9 472 54.4
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 5.4e-125 452.2 581 48.2
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 4.3e-122 442.6 449 56.6
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 6.2e-121 438.7 409 64.1
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 2.6e-119 433.3 507 53.3
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 3.4e-119 433.0 505 54.5
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 1.7e-118 430.6 505 53.7
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 4.2e-117 426.0 510 52.2
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.2e-116 424.5 504 51.6
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 1.2e-116 424.5 504 51.6
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 1.2e-116 424.5 507 52.7
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 1.0e-115 421.4 433 57.0
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 3.0e-115 419.9 527 50.9
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 3.0e-115 419.9 506 52.0
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 8.7e-115 418.3 506 51.0
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 1.1e-114 417.9 430 57.9
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 1.3e-113 414.5 502 51.2
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 2.8e-113 413.3 453 57.2
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 9.0e-112 408.3 500 49.6
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 2.0e-111 407.1 503 49.3
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 1.1e-109 401.4 505 49.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 9.3e-109 398.3 450 52.0
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.8e-104 384.0 501 49.5
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 6.5e-102 375.6 352 58.0
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 7.2e-101 372.1 505 46.5
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 6.9e-96 355.5 371 58.5
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.0e-94 351.7 418 51.7
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 7.2e-93 345.5 418 53.1
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.0e-82 310.8 261 65.5
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 5.5e-77 292.7 390 47.2
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 1.1e-64 251.9 313 49.8
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 4.9e-57 226.5 299 48.8
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 2.1e-44 184.5 316 40.8
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 6.0e-39 166.4 231 42.9
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.1e-32 143.7 310 37.1
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 5.6e-29 133.3 543 30.9
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.4e-27 127.9 167 46.1
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 1.3e-25 122.1 78 80.8
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.3e-25 122.1 212 41.5
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 1.9e-24 118.2 161 47.2
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.5e-23 114.0 75 80.0
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.3e-22 111.3 66 78.8
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 5.1e-22 110.2 71 83.1
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 1.8e-19 101.7 59 78.0
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 3.1e-19 100.9 65 73.8
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.7e-17 95.1 53 92.5
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 1.3e-12 79.0 286 30.8
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 3.6e-12 77.4 44 86.4
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.2e-10 72.4 108 48.1
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 7.6e-10 69.7 37 91.9
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 4.9e-09 67.0 54 64.8
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 4.6e-07 60.5 58 60.3
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 4.6e-07 60.5 58 60.3
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 1.0e-06 59.3 64 51.6
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 5.1e-06 57.0 43 69.8


User provided reference genes

Program Settings