Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 3.1e-200 701.8 401 100.0
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 4.1e-168 595.1 383 82.5
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.2e-146 523.9 351 75.5
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.7e-145 520.0 356 75.6
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 5.6e-141 505.0 354 74.0
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 3.6e-140 502.3 339 76.7
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 8.1e-140 501.1 307 81.8
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.7e-137 493.4 319 78.7
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 3.8e-137 492.3 354 74.0
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 3.8e-137 492.3 314 77.7
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 6.4e-137 491.5 313 80.2
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.9e-136 490.0 318 78.0
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 5.4e-136 488.4 319 77.4
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.6e-135 486.9 353 73.7
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 6.0e-135 485.0 326 73.6
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 6.0e-135 485.0 334 75.1
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 6.0e-135 485.0 317 75.7
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 3.0e-134 482.6 355 70.4
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 6.7e-134 481.5 355 71.3
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.1e-133 480.7 338 73.4
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 1.5e-133 480.3 315 78.7
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.9e-133 479.9 347 72.3
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.5e-133 479.6 318 76.1
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 4.3e-133 478.8 347 72.0
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 5.6e-133 478.4 349 72.2
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 2.1e-132 476.5 363 70.0
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.8e-132 476.1 334 73.1
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 3.7e-132 475.7 344 71.8
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 6.2e-132 474.9 350 71.4
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 8.1e-132 474.6 312 76.6
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.4e-131 473.8 350 71.4
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.8e-131 473.4 351 68.9
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.8e-131 473.4 351 68.9
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 3.1e-131 472.6 310 77.1
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 3.1e-131 472.6 318 74.8
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 3.1e-131 472.6 339 72.6
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 3.1e-131 472.6 333 73.3
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 6.9e-131 471.5 351 69.8
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 6.9e-131 471.5 327 72.5
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 6.9e-131 471.5 312 77.6
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 2.6e-130 469.5 349 72.5
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 3.4e-130 469.2 346 71.1
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 4.5e-130 468.8 333 73.0
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 5.8e-130 468.4 354 68.9
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 7.6e-130 468.0 310 76.1
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.3e-129 467.2 316 75.9
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.7e-129 466.8 311 75.6
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 2.2e-129 466.5 327 72.8
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 4.9e-129 465.3 315 75.9
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 6.4e-129 464.9 315 75.9
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 8.4e-129 464.5 347 69.7
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 2.4e-128 463.0 355 68.7
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.4e-128 463.0 366 67.8
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 4.2e-128 462.2 329 72.3
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 9.3e-128 461.1 344 70.6
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 2.7e-127 459.5 342 70.2
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 1.8e-126 456.8 349 67.9
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.8e-126 456.8 312 74.7
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.3e-126 456.4 319 72.7
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 2.3e-126 456.4 314 75.5
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 5.1e-126 455.3 353 68.6
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.3e-125 452.6 348 71.0
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 1.3e-124 450.7 327 71.3
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 4.8e-124 448.7 329 69.6
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 8.2e-124 448.0 316 72.2
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 8.2e-124 448.0 336 69.6
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 1.1e-123 447.6 309 72.8
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 2.4e-123 446.4 335 69.0
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.7e-121 440.3 380 65.3
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.7e-121 440.3 320 69.7
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 6.5e-121 438.3 369 67.2
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.4e-120 437.2 357 64.4
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 2.5e-120 436.4 317 70.7
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 3.2e-120 436.0 316 71.5
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 3.2e-120 436.0 316 71.5
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 4.2e-120 435.6 312 70.2
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 4.2e-120 435.6 320 70.3
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 7.1e-120 434.9 315 70.8
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 7.1e-120 434.9 316 71.5
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 2.1e-119 433.3 316 70.9
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 1.3e-118 430.6 392 60.7
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.0e-118 429.5 321 69.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 7.4e-117 424.9 313 68.4
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 6.3e-116 421.8 313 68.4
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 3.2e-112 409.5 324 66.0
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.6e-111 407.1 317 68.5
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 2.6e-106 389.8 275 74.2
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 9.4e-104 381.3 300 63.7
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 2.1e-103 380.2 596 42.3
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.5e-98 364.0 257 73.2
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 5.0e-97 359.0 264 70.5
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 1.4e-96 357.5 302 62.3
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 9.4e-96 354.8 277 63.9
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.2e-92 343.6 253 71.5
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 7.5e-85 318.5 266 64.3
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.1e-83 314.7 286 57.0
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 5.5e-80 302.4 223 68.2
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 4.7e-71 272.7 309 51.5
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 7.8e-66 255.4 188 71.8
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.1e-64 251.5 185 68.6
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.7e-60 237.7 171 70.8
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.1e-48 198.4 179 60.3
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.9e-48 197.6 152 65.8
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.3e-41 174.9 264 37.9
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 2.4e-30 137.5 190 47.9
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 3.2e-27 127.1 69 82.6
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 1.2e-26 125.2 93 68.8
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.6e-26 124.8 99 66.7
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 3.5e-26 123.6 75 78.7
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.7e-25 121.3 87 72.4
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 9.9e-21 105.5 115 57.4
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.1e-19 102.1 90 62.2
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.4e-19 99.8 62 79.0
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.7e-18 97.4 62 77.4
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.1e-16 92.0 48 85.4
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.5e-16 91.7 96 53.1
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.5e-16 90.9 63 76.2
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 9.6e-16 89.0 48 83.3
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 6.2e-15 86.3 67 67.2
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 2.6e-13 80.9 113 39.8
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 4.9e-12 76.6 38 86.8
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 1.4e-11 75.1 39 87.2


User provided reference genes

Program Settings