Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 3.3e-62 241.5 120 100.0
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 5.7e-30 134.4 103 70.9
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.8e-20 102.8 107 56.1
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.9e-18 95.5 105 53.3
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 2.7e-16 89.0 104 48.1
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 3.6e-16 88.6 104 48.1
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 4.7e-16 88.2 103 47.6
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 4.7e-16 88.2 103 45.6
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 1.0e-15 87.0 107 47.7
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.2e-14 83.6 103 46.6
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 1.5e-14 83.2 111 46.8
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 1.5e-14 83.2 103 50.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 4.4e-14 81.6 106 45.3
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 5.7e-14 81.3 107 40.2
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 5.7e-14 81.3 106 46.2
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 5.7e-14 81.3 106 46.2
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 7.5e-14 80.9 103 44.7
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 7.5e-14 80.9 102 46.1
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 9.8e-14 80.5 103 47.6
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.7e-13 79.7 102 47.1
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.8e-13 79.0 102 47.1
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 3.7e-13 78.6 113 43.4
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 4.8e-13 78.2 103 43.7
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 4.1e-12 75.1 102 43.1
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 4.1e-12 75.1 101 40.6
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 5.4e-12 74.7 103 40.8
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 5.9e-11 71.2 78 44.9
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 1.0e-10 70.5 75 48.0
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 2.3e-10 69.3 75 46.7
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 2.9e-10 68.9 75 46.7
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 3.8e-10 68.6 77 45.5
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 3.8e-10 68.6 78 43.6
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 5.0e-10 68.2 77 44.2
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 6.6e-10 67.8 104 44.2
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 6.6e-10 67.8 79 50.6
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 6.6e-10 67.8 79 50.6
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 1.9e-09 66.2 103 37.9
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 2.5e-09 65.9 94 42.6
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 3.3e-09 65.5 108 41.7
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.2e-09 65.1 74 45.9
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 4.2e-09 65.1 74 45.9
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.6e-08 63.2 102 38.2
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.6e-08 63.2 75 46.7
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 2.1e-08 62.8 79 43.0
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 2.1e-08 62.8 67 47.8
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 4.7e-08 61.6 70 44.3
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.7e-08 61.6 74 44.6
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 4.7e-08 61.6 67 47.8
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 8.0e-08 60.8 112 39.3
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.8e-07 59.7 102 38.2
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 4.0e-07 58.5 102 39.2
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 5.2e-07 58.2 102 38.2
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 5.2e-07 58.2 72 43.1
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.0e-06 56.2 102 38.2
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 2.0e-06 56.2 77 39.0
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 9.8e-06 53.9 102 36.3


User provided reference genes

Program Settings