Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 6.0e-49 197.2 101 100.0
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 5.7e-23 110.9 121 50.4
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 5.7e-23 110.9 121 50.4
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.7e-22 108.2 121 51.2
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 3.7e-22 108.2 121 47.9
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.1e-21 106.7 121 47.9
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 1.4e-21 106.3 121 47.9
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.4e-21 106.3 121 47.9
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 3.1e-21 105.1 121 49.6
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 4.1e-21 104.8 121 47.9
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 5.3e-21 104.4 121 47.9
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 5.3e-21 104.4 121 45.5
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 5.3e-21 104.4 121 47.1
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 9.1e-21 103.6 121 48.8
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.2e-20 103.2 121 48.8
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.5e-20 102.8 121 46.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.5e-20 102.8 121 48.8
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.5e-20 102.8 121 48.8
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 3.4e-20 101.7 121 47.1
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 3.4e-20 101.7 122 45.1
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.5e-20 101.3 120 48.3
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.5e-20 101.3 121 47.9
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 4.5e-20 101.3 121 47.1
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 5.9e-20 100.9 121 45.5
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 7.7e-20 100.5 122 45.1
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 7.7e-20 100.5 121 47.9
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.0e-19 100.1 121 43.0
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.3e-19 99.8 122 47.5
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.3e-19 99.8 121 47.1
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 1.3e-19 99.8 121 46.3
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.7e-19 99.4 121 46.3
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.2e-19 99.0 121 47.1
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 2.2e-19 99.0 121 45.5
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 2.2e-19 99.0 121 43.8
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 2.2e-19 99.0 121 46.3
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 2.9e-19 98.6 121 43.0
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.8e-19 98.2 121 47.9
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 3.8e-19 98.2 121 43.0
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 5.0e-19 97.8 121 42.1
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 6.5e-19 97.4 105 51.4
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 8.5e-19 97.1 122 43.4
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 1.1e-18 96.7 121 44.6
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.9e-18 95.9 121 44.6
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 1.9e-18 95.9 121 43.8
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.5e-18 95.5 121 45.5
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 3.2e-18 95.1 121 42.1
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 3.2e-18 95.1 121 47.9
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 4.2e-18 94.7 121 45.5
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 9.4e-18 93.6 122 44.3
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 9.4e-18 93.6 122 46.7
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.6e-17 92.8 121 41.3
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.6e-17 92.8 122 41.8
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 1.6e-17 92.8 122 41.8
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.6e-17 92.8 121 42.1
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 2.1e-17 92.4 122 45.9
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 4.7e-17 91.3 122 44.3
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 6.1e-17 90.9 123 45.5
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 7.9e-17 90.5 121 40.5
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 1.0e-16 90.1 122 41.8
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.4e-16 89.7 120 42.5
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 1.8e-16 89.4 121 43.8
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 3.0e-16 88.6 123 45.5
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 3.9e-16 88.2 100 49.0
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 3.9e-16 88.2 121 41.3
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 3.9e-16 88.2 120 44.2
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 5.1e-16 87.8 121 42.1
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 6.7e-16 87.4 117 43.6
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.1e-15 86.7 122 41.8
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.1e-15 86.7 137 38.7
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 2.6e-15 85.5 121 39.7
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.6e-15 85.5 121 41.3
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 9.7e-15 83.6 120 40.8
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.8e-13 79.3 122 41.8
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.4e-13 79.0 121 41.3
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 3.1e-13 78.6 122 40.2
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 4.1e-13 78.2 123 40.7
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 2.6e-12 75.5 121 37.2
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 3.5e-12 75.1 111 42.3
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 5.9e-12 74.3 105 43.8
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 3.8e-11 71.6 122 36.1
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 1.1e-10 70.1 128 38.3
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.1e-10 70.1 120 38.3
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 2.5e-10 68.9 122 36.1
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 3.2e-10 68.6 124 36.3
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 3.2e-10 68.6 124 36.3
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.2e-09 66.6 130 34.6
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.6e-09 66.2 126 34.1
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 2.7e-09 65.5 121 34.7
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 2.7e-09 65.5 130 34.6
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 2.7e-09 65.5 130 34.6
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 6.1e-09 64.3 128 34.4
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 8.0e-09 63.9 127 33.1
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 5.2e-08 61.2 52 55.8
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 7.5e-07 57.4 129 32.6
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 1.7e-06 56.2 123 35.0
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 4.8e-06 54.7 56 46.4


User provided reference genes

Program Settings