Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 8.2e-106 387.1 201 100.0
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 1.5e-78 296.6 202 74.3
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 2.7e-77 292.4 200 77.0
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 3.6e-77 292.0 201 74.1
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 1.0e-76 290.4 196 75.0
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 1.8e-76 289.7 200 73.0
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 5.2e-76 288.1 204 70.1
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 6.7e-76 287.7 204 72.1
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 1.2e-75 287.0 207 71.0
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 1.2e-75 287.0 204 71.1
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 1.2e-75 287.0 201 71.1
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 2.0e-75 286.2 207 69.1
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 3.3e-75 285.4 203 70.4
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 3.3e-75 285.4 200 74.0
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 3.3e-75 285.4 207 70.5
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 5.7e-75 284.6 201 73.1
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 5.7e-75 284.6 202 71.3
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 7.5e-75 284.3 196 72.4
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 2.2e-74 282.7 203 70.0
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 3.7e-74 282.0 206 68.4
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 6.3e-74 281.2 198 69.7
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 6.3e-74 281.2 196 71.4
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 8.2e-74 280.8 205 68.8
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.1e-73 280.4 186 73.7
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 1.1e-73 280.4 207 69.1
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.4e-73 280.0 205 72.7
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 1.4e-73 280.0 204 76.0
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 1.8e-73 279.6 202 71.8
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 1.8e-73 279.6 208 73.6
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 3.1e-73 278.9 204 70.1
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 3.1e-73 278.9 202 73.3
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 5.3e-73 278.1 199 70.4
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 9.1e-73 277.3 207 73.4
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 9.1e-73 277.3 204 68.1
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 9.1e-73 277.3 198 72.2
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 1.2e-72 276.9 198 70.7
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 1.6e-72 276.6 201 72.1
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 2.0e-72 276.2 202 70.8
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 2.0e-72 276.2 205 67.8
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 2.0e-72 276.2 208 71.2
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 2.0e-72 276.2 204 68.1
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 4.5e-72 275.0 205 70.7
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 5.9e-72 274.6 203 69.5
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 1.0e-71 273.9 197 67.0
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 1.0e-71 273.9 218 68.8
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 1.3e-71 273.5 211 66.4
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 1.7e-71 273.1 187 77.5
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 2.2e-71 272.7 205 68.8
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 5.0e-71 271.6 185 78.4
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 6.5e-71 271.2 202 71.8
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 1.5e-70 270.0 193 74.6
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 1.9e-70 269.6 203 71.9
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 1.6e-69 266.5 206 70.9
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 3.6e-69 265.4 209 65.1
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 4.7e-69 265.0 195 73.8
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 8.0e-69 264.2 196 68.4
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 1.4e-68 263.5 202 66.3
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 1.4e-68 263.5 202 71.3
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 3.0e-68 262.3 197 71.6
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 3.0e-68 262.3 197 72.6
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 4.0e-68 261.9 204 70.6
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 4.0e-68 261.9 202 71.3
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 6.8e-68 261.2 199 68.8
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 6.8e-68 261.2 197 70.6
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 6.8e-68 261.2 202 71.3
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 6.8e-68 261.2 200 68.0
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 8.8e-68 260.8 201 66.7
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 1.2e-67 260.4 215 61.9
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 1.2e-67 260.4 196 68.4
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 1.5e-67 260.0 197 66.5
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 1.5e-67 260.0 203 70.9
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 1.7e-66 256.5 199 71.4
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 4.8e-66 255.0 205 69.3
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 6.3e-66 254.6 193 71.5
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 1.1e-65 253.8 201 67.2
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 1.1e-65 253.8 179 75.4
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 2.4e-65 252.7 195 69.2
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 3.1e-65 252.3 214 68.2
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 5.4e-65 251.5 188 72.3
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 9.1e-65 250.8 195 68.7
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 9.1e-65 250.8 209 64.6
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 1.6e-64 250.0 195 68.7
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 1.6e-64 250.0 195 68.7
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 1.6e-64 250.0 203 70.4
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 2.0e-64 249.6 202 64.4
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 3.5e-64 248.8 201 69.2
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 5.9e-64 248.1 195 70.8
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 7.7e-64 247.7 200 68.5
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 1.3e-63 246.9 202 66.3
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 3.8e-63 245.4 186 66.7
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 3.8e-63 245.4 198 71.7
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 8.6e-63 244.2 200 68.0
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 1.5e-62 243.4 202 64.4
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 3.3e-62 242.3 185 70.8
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 5.5e-62 241.5 195 67.7
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 2.8e-61 239.2 145 78.6
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.8e-61 239.2 145 78.6
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 1.0e-60 237.3 200 68.5
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.0e-60 235.7 145 77.9
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 4.4e-59 231.9 156 71.8
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 1.3e-58 230.3 201 66.7
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 2.2e-58 229.6 184 64.1
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 8.3e-58 227.6 135 78.5
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 1.8e-57 226.5 202 61.4
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 2.4e-57 226.1 203 62.6
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 1.2e-56 223.8 111 90.1
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 1.7e-55 219.9 202 61.9
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 5.0e-55 218.4 153 67.3
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 1.2e-53 213.8 153 73.9
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 2.8e-53 212.6 201 63.2
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 3.6e-53 212.2 178 61.2
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 2.3e-52 209.5 125 76.0
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 3.1e-52 209.1 188 64.9
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 9.8e-51 204.1 112 81.2
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 1.6e-48 196.8 155 65.8
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 4.6e-48 195.3 158 70.3
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 3.0e-47 192.6 107 83.2
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 6.2e-45 184.9 91 91.2
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 1.8e-44 183.3 108 78.7
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 3.6e-37 159.1 205 50.7
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 3.7e-34 149.1 82 81.7
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 3.0e-31 139.4 120 67.5
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 4.3e-30 135.6 121 62.8
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 6.2e-29 131.7 101 55.4
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 1.6e-24 117.1 59 88.1
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 3.5e-24 115.9 209 44.0
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 1.3e-23 114.0 93 53.8
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 6.2e-21 105.1 106 47.2
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 1.6e-16 90.5 83 55.4
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.3e-14 82.4 49 73.5
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 2.1e-13 80.1 111 38.7
Solyc03g094070.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 6.9e-12 75.1 85 48.2
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 2.9e-10 69.7 37 86.5
Cfa025999 Carpinus fangiana HOM05D005916 ORTHO05D007168 3.0e-07 59.7 83 44.6
FAN11G3144 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.0e-07 59.7 100 43.0
PGSC0003DMG401008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 3.0e-07 59.7 81 56.8
Dinv07271 Davidia involucrata HOM05D005916 ORTHO05D007168 1.9e-06 57.0 34 70.6


User provided reference genes

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