Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046227.1 Olea europaea HOM05D001685 ORTHO05D009095 4.4e-118 427.9 212 100.0
SGA_v2.0_scaffold201G41336 Striga asiatica HOM05D001685 ORTHO05D009095 4.6e-67 258.5 197 65.0
Dinv31798 Davidia involucrata HOM05D001685 ORTHO05D009095 4.1e-63 245.4 187 64.2
Nitab4.5_0002156g0130 Nicotiana tabacum HOM05D001685 ORTHO05D009095 7.6e-62 241.1 190 62.1
PGSC0003DMG402003705 Solanum tuberosum HOM05D001685 ORTHO05D009095 5.0e-61 238.4 190 60.0
Rhsim07G0243900 Rhododendron simsii HOM05D001685 ORTHO05D009095 1.1e-60 237.3 197 58.4
CSS0008119 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 1.4e-60 236.9 181 63.5
CSS0037156 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 3.2e-60 235.7 197 58.4
SalBow7G2633 Salvia bowleyana HOM05D001685 ORTHO05D009095 1.2e-59 233.8 173 68.2
Lj4C32T13 Lonicera japonica HOM05D001685 ORTHO05D009095 1.0e-58 230.7 190 61.6
Peaxi162Scf00189g00133 Petunia axillaris HOM05D001685 ORTHO05D009095 1.0e-58 230.7 157 68.8
TAR381G0057 Trochodendron aralioides HOM05D001685 ORTHO05D009095 2.3e-58 229.6 168 68.5
Nitab4.5_0001840g0040 Nicotiana tabacum HOM05D001685 ORTHO05D009095 5.1e-58 228.4 160 66.2
GSVIVG01009800001 Vitis vinifera HOM05D001685 ORTHO05D009095 1.1e-57 227.3 199 59.3
Sopen04g034510 Solanum pennellii HOM05D001685 ORTHO05D009095 3.3e-57 225.7 154 65.6
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 1.3e-56 223.8 160 63.8
vmacro04314 Vaccinium macrocarpon HOM05D001685 ORTHO05D009095 1.3e-56 223.8 159 64.8
Cc10_g02280 Coffea canephora HOM05D001685 ORTHO05D009095 2.2e-56 223.0 197 58.4
DCAR_017512 Daucus carota HOM05D001685 ORTHO05D009095 2.2e-56 223.0 169 62.1
QL02p010383 Quercus lobata HOM05D001685 ORTHO05D009095 3.7e-56 222.2 168 64.9
QL02p010421 Quercus lobata HOM05D001685 ORTHO05D009095 3.7e-56 222.2 168 64.9
Thecc.08G035400 Theobroma cacao HOM05D001685 ORTHO05D009095 1.8e-55 219.9 151 70.2
Hma1.2p1_1394F.1_g280400 Hydrangea macrophylla HOM05D001685 ORTHO05D009095 2.4e-55 219.5 149 69.1
Haze_22569 Corylus avellana HOM05D001685 ORTHO05D009095 3.1e-55 219.2 201 55.7
CiPaw.07G155500 Carya illinoinensis HOM05D001685 ORTHO05D009095 2.0e-54 216.5 167 63.5
Cfa013891 Carpinus fangiana HOM05D001685 ORTHO05D009095 2.6e-54 216.1 201 55.2
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 3.4e-54 215.7 157 65.0
COL.COLO4_26223 Corchorus olitorius HOM05D001685 ORTHO05D009095 1.0e-53 214.2 151 69.5
Duzib041G0390 Durio zibethinus HOM05D001685 ORTHO05D009095 1.3e-53 213.8 151 70.2
PSO675G8938 Papaver somniferum HOM05D001685 ORTHO05D009095 2.2e-53 213.0 144 70.8
Cpa.g.sc99.23 Carica papaya HOM05D001685 ORTHO05D009095 2.9e-53 212.6 150 70.0
HanXRQChr05g0149471 Helianthus annuus HOM05D001685 ORTHO05D009095 2.9e-53 212.6 163 63.8
PSO541G2326 Papaver somniferum HOM05D001685 ORTHO05D009095 5.0e-53 211.8 200 57.0
Nn5g29153 Nelumbo nucifera HOM05D001685 ORTHO05D009095 6.5e-53 211.5 189 59.8
CAN.G851.28 Capsicum annuum HOM05D001685 ORTHO05D009095 1.4e-52 210.3 134 73.1
Gohir.A05G258300 Gossypium hirsutum HOM05D001685 ORTHO05D009095 3.2e-52 209.1 147 70.1
Hund17205 Selenicereus undatus HOM05D001685 ORTHO05D009095 4.2e-52 208.8 138 71.0
Lsat_1_v5_gn_5_25621 Lactuca sativa HOM05D001685 ORTHO05D009095 5.5e-52 208.4 192 55.7
Ciclev10000620m.g Citrus clementina HOM05D001685 ORTHO05D009095 7.2e-52 208.0 152 66.4
Prupe.1G372200 Prunus persica HOM05D001685 ORTHO05D009095 9.4e-52 207.6 151 66.2
Gohir.D05G259700 Gossypium hirsutum HOM05D001685 ORTHO05D009095 1.2e-51 207.2 140 70.7
Gorai.009G271500 Gossypium raimondii HOM05D001685 ORTHO05D009095 1.2e-51 207.2 147 68.7
PGR083G2764 Punica granatum HOM05D001685 ORTHO05D009095 7.9e-51 204.5 173 62.4
CANSAT25G3574 Cannabis sativa HOM05D001685 ORTHO05D009095 1.0e-50 204.1 163 60.1
ECA246G1724 Erigeron canadensis HOM05D001685 ORTHO05D009095 6.7e-50 201.4 164 61.6
Sc26g0003360 Simmondsia chinensis HOM05D001685 ORTHO05D009095 1.1e-49 200.7 138 69.6
Manes.18G019200 Manihot esculenta HOM05D001685 ORTHO05D009095 1.5e-49 200.3 156 62.2
TWI56G0203 Tripterygium wilfordii HOM05D001685 ORTHO05D009095 4.3e-49 198.7 153 61.4
unitig_578.g16082 Utricularia gibba HOM05D001685 ORTHO05D009095 5.7e-49 198.4 176 57.4
Potri.002G029600 Populus trichocarpa HOM05D001685 ORTHO05D009095 2.2e-48 196.4 177 58.8
Aqoxy6G01232 Aquilegia oxysepala HOM05D001685 ORTHO05D009095 2.8e-48 196.1 151 65.6
CDE09G0148 Ceratophyllum demersum HOM05D005369 ORTHO05D009095 2.8e-48 196.1 129 66.7
Sed0026661 Sechium edule HOM05D004346 ORTHO05D009095 2.8e-48 196.1 158 61.4
RcHm_v2.0_Chr6g0301971 Rosa chinensis HOM05D001685 ORTHO05D009095 3.7e-48 195.7 158 62.7
SEGI_28040 Sequoiadendron giganteum HOM05D001685 ORTHO05D009095 3.7e-48 195.7 148 62.2
arahy.Tifrunner.gnm1.ann1.0FMT0L Arachis hypogaea HOM05D001685 ORTHO05D009095 4.8e-48 195.3 128 75.0
arahy.Tifrunner.gnm1.ann1.1F2VQA Arachis hypogaea HOM05D001685 ORTHO05D009095 4.8e-48 195.3 128 75.0
MELO3C003786.2 Cucumis melo HOM05D001685 ORTHO05D009095 4.8e-48 195.3 147 68.0
ClCG05G018650 Citrullus lanatus HOM05D001685 ORTHO05D009095 6.3e-48 194.9 165 63.0
MD15G1020600 Malus domestica HOM05D001685 ORTHO05D009095 6.3e-48 194.9 130 70.8
Eucgr.F01606 Eucalyptus grandis HOM05D001685 ORTHO05D009095 1.1e-47 194.1 144 66.7
FvH4_2g38870 Fragaria vesca HOM05D001685 ORTHO05D009095 1.1e-47 194.1 147 63.3
CsaV3_3G045540 Cucumis sativus L. HOM05D001685 ORTHO05D009095 1.4e-47 193.7 147 67.3
AUR62014453 Chenopodium quinoa HOM05D001685 ORTHO05D009095 2.4e-47 193.0 141 66.0
FAN27G2561 Fragaria x ananassa HOM05D001685 ORTHO05D009095 2.4e-47 193.0 133 68.4
THA.LOC104820512 Tarenaya hassleriana HOM05D001685 ORTHO05D009095 1.5e-46 190.3 150 63.3
Sabra05G0179800 Salix brachista HOM05D001685 ORTHO05D009095 2.0e-46 189.9 151 64.9
EL10Ac1g00578 Beta vulgaris HOM05D001685 ORTHO05D009095 5.9e-46 188.3 186 52.7
AUR62034545 Chenopodium quinoa HOM05D001685 ORTHO05D009095 1.3e-45 187.2 141 64.5
ATR0665G478 Amborella trichopoda HOM05D001685 ORTHO05D009095 2.2e-45 186.4 147 63.3
Glyma.14G070100 Glycine max HOM05D001685 ORTHO05D009095 8.5e-45 184.5 155 61.3
Lalb_Chr14g0369641 Lupinus albus HOM05D001685 ORTHO05D009095 1.1e-44 184.1 157 63.1
Ah.11g039830 Amaranthus hybridus HOM05D001685 ORTHO05D009095 3.2e-44 182.6 149 61.1
VMungo0647G1310 Vigna mungo HOM05D001685 ORTHO05D009095 7.2e-44 181.4 151 59.6
Glyma.17G254500 Glycine max HOM05D001685 ORTHO05D009095 2.1e-43 179.9 151 60.9
Phvul.001G010500 Phaseolus vulgaris HOM05D001685 ORTHO05D009095 3.6e-43 179.1 151 59.6
TPR.G6019 Trifolium pratense HOM05D001685 ORTHO05D009095 3.6e-43 179.1 156 59.6
Medtr1g023160 Medicago truncatula HOM05D001685 ORTHO05D009095 3.0e-42 176.0 155 55.5
Lj5g0015544 Lotus japonicus HOM05D001685 ORTHO05D009095 2.6e-41 172.9 135 62.2
Ca_13386_v3 Cicer arietinum L. HOM05D001685 ORTHO05D009095 1.7e-40 170.2 186 46.8
Os03g0799700 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D009095 5.0e-37 158.7 135 57.0
Zm00001eb061130 Zea mays HOM05D001685 ORTHO05D009095 1.5e-36 157.1 132 58.3
AagrBONN_evm.TU.Sc2ySwM_344.1121 Anthoceros agrestis HOM05D001685 ORTHO05D009095 1.6e-35 153.7 152 55.3
Pp3c14_3560 Physcomitrium patens HOM05D001685 ORTHO05D009095 1.6e-35 153.7 144 56.2
Mapoly0009s0196 Marchantia polymorpha HOM05D001685 ORTHO05D009095 4.7e-35 152.1 149 53.0
CBR_g20183 Chara braunii HOM05D001685 ORTHO05D009095 1.6e-30 137.1 132 51.5
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 2.0e-30 136.7 77 83.1
SMO300G0022 Selaginella moellendorffii HOM05D001685 ORTHO05D009095 3.5e-30 136.0 126 56.3
Sed0028196 Sechium edule HOM05D001685 ORTHO05D009095 2.7e-27 126.3 103 62.1
Potri.005G233101 Populus trichocarpa HOM05D001685 ORTHO05D009095 1.8e-26 123.6 98 66.3
RcHm_v2.0_Chr7g0217061 Rosa chinensis HOM05D001685 ORTHO05D009095 7.5e-25 118.2 79 69.6
GSVIVG01009798001 Vitis vinifera HOM05D001685 ORTHO05D009095 6.6e-13 78.6 50 78.0
Cre09.g395600 Chlamydomonas reinhardtii HOM05D001685 ORTHO05D009095 4.7e-11 72.4 212 29.7
PRCOL_00006195 Prasinoderma coloniale HOM05D001685 ORTHO05D009095 1.4e-07 60.8 146 29.5
MCO01G480 Micromonas commoda HOM05D001685 ORTHO05D009095 1.6e-06 57.4 137 32.1
Sabra02G0023600 Salix brachista HOM05D001685 ORTHO05D008134 4.6e-06 55.8 36 66.7


User provided reference genes

Program Settings