Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046204.1 Olea europaea HOM05D000101 ORTHO05D007021 8.8e-78 293.5 144 100.0
Oeu041722.1 Olea europaea HOM05D000101 ORTHO05D007021 1.4e-43 179.9 93 94.6
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 1.8e-38 162.9 94 85.1
MSTRG.17651 Avicennia marina HOM05D000101 ORTHO05D007021 4.4e-37 158.3 91 84.6
Migut.N02406 Erythranthe guttata HOM05D000101 ORTHO05D007021 4.4e-37 158.3 91 84.6
Sc06g0003480 Simmondsia chinensis HOM05D000101 ORTHO05D007021 1.3e-36 156.8 91 80.2
Dinv29322 Davidia involucrata HOM05D000101 ORTHO05D007021 1.7e-36 156.4 91 82.4
Dinv29324 Davidia involucrata HOM05D000101 ORTHO05D007021 1.7e-36 156.4 91 82.4
Ah.06g194870 Amaranthus hybridus HOM05D000101 ORTHO05D007021 2.2e-36 156.0 93 79.6
HanXRQChr10g0307811 Helianthus annuus HOM05D000101 ORTHO05D007021 2.9e-36 155.6 91 79.1
Eucgr.J00668 Eucalyptus grandis HOM05D000101 ORTHO05D007021 1.1e-35 153.7 92 81.5
Cc01_g07360 Coffea canephora HOM05D000101 ORTHO05D007021 1.4e-35 153.3 92 78.3
FAN23G0853 Fragaria x ananassa HOM05D002590 ORTHO05D002763 2.4e-35 152.5 94 79.8
SalBow3G0539 Salvia bowleyana HOM05D000101 ORTHO05D007021 3.2e-35 152.1 88 86.4
Lj2C98T13 Lonicera japonica HOM05D000101 ORTHO05D007021 4.1e-35 151.8 94 79.8
Peaxi162Scf00526g00083 Petunia axillaris HOM05D000101 ORTHO05D007021 7.1e-35 151.0 94 78.7
Rhsim13G0204000 Rhododendron simsii HOM05D000101 ORTHO05D007021 7.1e-35 151.0 91 80.2
CiPaw.13G147800 Carya illinoinensis HOM05D000101 ORTHO05D007021 1.2e-34 150.2 91 78.0
Lj2C4T1 Lonicera japonica HOM05D000101 ORTHO05D007021 1.6e-34 149.8 91 79.1
Cpa.g.sc9.381 Carica papaya HOM05D000101 ORTHO05D007021 2.7e-34 149.1 93 77.4
Lsat_1_v5_gn_5_88160 Lactuca sativa HOM05D000101 ORTHO05D007021 3.5e-34 148.7 90 78.9
DCAR_002122 Daucus carota HOM05D000101 ORTHO05D007021 4.6e-34 148.3 90 77.8
FvH4_1g18980 Fragaria vesca HOM05D000101 ORTHO05D007021 4.6e-34 148.3 94 77.7
CSS0002182 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D007021 6.0e-34 147.9 91 79.1
QL01p016256 Quercus lobata HOM05D000101 ORTHO05D007021 6.0e-34 147.9 92 77.2
CAN.G65.208 Capsicum annuum HOM05D000101 ORTHO05D007021 1.0e-33 147.1 91 73.6
Prupe.4G269700 Prunus persica HOM05D000101 ORTHO05D007021 1.0e-33 147.1 92 76.1
Haze_23275 Corylus avellana HOM05D000101 ORTHO05D007021 1.3e-33 146.7 91 75.8
Glyma.07G235100 Glycine max HOM05D000101 ORTHO05D007021 1.3e-33 146.7 91 73.6
Glyma.20G043800 Glycine max HOM05D000101 ORTHO05D007021 1.3e-33 146.7 91 73.6
SGA_v2.0_scaffold79G25529 Striga asiatica HOM05D000101 ORTHO05D007021 1.3e-33 146.7 91 76.9
Glyma.07G235000 Glycine max HOM05D000101 ORTHO05D007021 1.7e-33 146.4 91 72.5
Nitab4.5_0000271g0210 Nicotiana tabacum HOM05D000101 ORTHO05D007021 1.7e-33 146.4 94 75.5
Nitab4.5_0006265g0050 Nicotiana tabacum HOM05D000101 ORTHO05D007021 1.7e-33 146.4 94 75.5
QL01p016239 Quercus lobata HOM05D000101 ORTHO05D007021 1.7e-33 146.4 92 76.1
AUR62006572 Chenopodium quinoa HOM05D000101 ORTHO05D007021 2.3e-33 146.0 129 59.7
Lj6g0006302 Lotus japonicus HOM05D000101 ORTHO05D007021 3.0e-33 145.6 91 74.7
RcHm_v2.0_Chr2g0110001 Rosa chinensis HOM05D000101 ORTHO05D007021 3.0e-33 145.6 94 77.7
unitig_22.g6178 Utricularia gibba HOM05D000101 ORTHO05D007021 3.0e-33 145.6 93 75.3
Aqoxy2G03523 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 3.9e-33 145.2 91 76.9
TPR.G11957 Trifolium pratense HOM05D000101 ORTHO05D007021 3.9e-33 145.2 91 74.7
AUR62000226 Chenopodium quinoa HOM05D000101 ORTHO05D007021 5.1e-33 144.8 91 74.7
ClCG02G022620 Citrullus lanatus HOM05D000101 ORTHO05D007021 5.1e-33 144.8 92 76.1
MELO3C014535.2 Cucumis melo HOM05D000101 ORTHO05D007021 5.1e-33 144.8 92 76.1
Lalb_Chr06g0173421 Lupinus albus HOM05D000101 ORTHO05D007021 5.1e-33 144.8 91 73.6
FAN28G0419 Fragaria x ananassa HOM05D000101 ORTHO05D007021 6.6e-33 144.4 94 76.6
Solyc06g073615.1 Solanum lycopersicum HOM05D000101 ORTHO05D007021 8.6e-33 144.1 94 75.5
Sopen06g030030 Solanum pennellii HOM05D000101 ORTHO05D007021 8.6e-33 144.1 94 75.5
Phvul.006G016500 Phaseolus vulgaris HOM05D000101 ORTHO05D007021 1.1e-32 143.7 91 72.5
SGA_v2.0_scaffold13G06395 Striga asiatica HOM05D000101 ORTHO05D007021 1.1e-32 143.7 91 74.7
VMungo0540G1253 Vigna mungo HOM05D000101 ORTHO05D007021 1.1e-32 143.7 91 72.5
GSVIVG01037393001 Vitis vinifera HOM05D000101 ORTHO05D007021 1.1e-32 143.7 94 75.5
Ciclev10016806m.g Citrus clementina HOM05D000101 ORTHO05D007021 1.5e-32 143.3 91 73.6
Lj6g0007250 Lotus japonicus HOM05D000101 ORTHO05D007021 2.5e-32 142.5 91 73.6
PGR119G0271 Punica granatum HOM05D000101 ORTHO05D007021 2.5e-32 142.5 95 75.8
AT2G43760 Arabidopsis thaliana HOM05D000101 ORTHO05D007021 3.3e-32 142.1 92 71.7
EL10Ac4g10078 Beta vulgaris HOM05D000101 ORTHO05D007021 3.3e-32 142.1 91 73.6
CsaV3_6G038720 Cucumis sativus L. HOM05D000101 ORTHO05D007021 3.3e-32 142.1 92 73.9
CANSAT54G0276 Cannabis sativa HOM05D000101 ORTHO05D007021 4.3e-32 141.7 91 73.6
TWI79G1559 Tripterygium wilfordii HOM05D000101 ORTHO05D007021 4.3e-32 141.7 90 76.7
GSVIVG01037400001 Vitis vinifera HOM05D000101 ORTHO05D007021 4.3e-32 141.7 94 74.5
Duzib150G0203 Durio zibethinus HOM05D000101 ORTHO05D007021 7.3e-32 141.0 92 72.8
Duzib150G0818 Durio zibethinus HOM05D000101 ORTHO05D007021 7.3e-32 141.0 92 72.8
CARHR138950 Cardamine hirsuta HOM05D000101 ORTHO05D007021 9.5e-32 140.6 91 71.4
Duzib170G0394 Durio zibethinus HOM05D000101 ORTHO05D007021 9.5e-32 140.6 92 72.8
Aa31LG1G25480 Aethionema arabicum HOM05D000101 ORTHO05D007021 1.2e-31 140.2 92 72.8
COL.COLO4_33246 Corchorus olitorius HOM05D000101 ORTHO05D007021 1.2e-31 140.2 92 71.7
Thhalv10001567m.g Eutrema salsugineum HOM05D000101 ORTHO05D007021 1.2e-31 140.2 92 71.7
Gohir.D08G019100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 1.2e-31 140.2 92 69.6
Gorai.004G013600 Gossypium raimondii HOM05D000101 ORTHO05D007021 1.2e-31 140.2 92 69.6
Medtr8g036270 Medicago truncatula HOM05D000101 ORTHO05D007021 1.2e-31 140.2 91 69.2
TAR383G0810 Trochodendron aralioides HOM05D000101 ORTHO05D007021 1.2e-31 140.2 91 76.9
AL4G42630 Arabidopsis lyrata HOM05D000101 ORTHO05D007021 1.6e-31 139.8 92 70.7
Carub.0004s2629 Capsella rubella HOM05D000101 ORTHO05D007021 1.6e-31 139.8 92 69.6
Gohir.A07G118800 Gossypium hirsutum HOM05D000101 ORTHO05D007021 1.6e-31 139.8 92 70.7
Manes.01G177200 Manihot esculenta HOM05D000101 ORTHO05D007021 1.6e-31 139.8 92 73.9
Nn2g10490 Nelumbo nucifera HOM05D000101 ORTHO05D007021 1.6e-31 139.8 90 76.7
Gohir.D07G123100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 2.1e-31 139.4 92 70.7
Gorai.001G132800 Gossypium raimondii HOM05D000101 ORTHO05D007021 2.1e-31 139.4 92 70.7
Thecc.09G252400 Theobroma cacao HOM05D000101 ORTHO05D007021 2.1e-31 139.4 92 71.7
Actinidia20391 Actinidia chinensis HOM05D000101 ORTHO05D007021 2.8e-31 139.0 91 69.2
Potri.001G272100 Populus trichocarpa HOM05D000101 ORTHO05D007021 3.6e-31 138.7 91 72.5
Sp4g25830 Schrenkiella parvula HOM05D000101 ORTHO05D007021 4.7e-31 138.3 92 69.6
A05p03970 Brassica napus HOM05D000101 ORTHO05D007021 6.2e-31 137.9 92 71.7
ECA234G3554 Erigeron canadensis HOM05D000101 ORTHO05D007021 6.2e-31 137.9 90 72.2
Medtr3g041720 Medicago truncatula HOM05D000101 ORTHO05D007021 6.2e-31 137.9 91 70.3
Sed0019464 Sechium edule HOM05D000101 ORTHO05D007021 6.2e-31 137.9 92 70.7
Gohir.A08G009100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 8.1e-31 137.5 92 69.6
BraA05t19385Z Brassica rapa HOM05D000101 ORTHO05D007021 1.1e-30 137.1 92 70.7
Ca_25981_v3 Cicer arietinum L. HOM05D000101 ORTHO05D007021 1.1e-30 137.1 91 71.4
PGSC0003DMG400005919 Solanum tuberosum HOM05D000101 ORTHO05D007021 1.1e-30 137.1 94 73.4
TAR383G0318 Trochodendron aralioides HOM05D000101 ORTHO05D007021 1.1e-30 137.1 91 75.8
BcaC02g12365 Brassica carinata HOM05D000101 ORTHO05D007021 1.8e-30 136.3 92 70.7
C04p04720 Brassica napus HOM05D000101 ORTHO05D007021 1.8e-30 136.3 92 70.7
BolC4t22102H Brassica oleracea HOM05D000101 ORTHO05D007021 1.8e-30 136.3 92 70.7
A04p33060 Brassica napus HOM05D000101 ORTHO05D007021 2.4e-30 136.0 92 70.7
BraA04t18766Z Brassica rapa HOM05D000101 ORTHO05D007021 2.4e-30 136.0 92 70.7
PSO675G1036 Papaver somniferum HOM05D000101 ORTHO05D007021 1.2e-29 133.7 91 73.6
Psat5g198640 Pisum sativum HOM05D000101 ORTHO05D007021 1.2e-29 133.7 91 68.1
PSO017G1758 Papaver somniferum HOM05D000101 ORTHO05D007021 4.4e-29 131.7 91 71.4
BcaC02g07150 Brassica carinata HOM05D000101 ORTHO05D007021 1.3e-28 130.2 92 68.5
MBI16_g00843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 4.9e-28 128.3 91 67.0
THA.LOC104808404 Tarenaya hassleriana HOM05D000101 ORTHO05D007021 2.4e-27 125.9 91 67.0
Atru.chr3.2842 Acer truncatum HOM05D000101 ORTHO05D007021 9.2e-27 124.0 73 79.5
SGA_v2.0_scaffold52G19230 Striga asiatica HOM05D000101 ORTHO05D007021 3.5e-26 122.1 73 76.7
ATR0626G326 Amborella trichopoda HOM05D000101 ORTHO05D007021 6.0e-26 121.3 88 64.8
Lsat_1_v5_gn_5_88140 Lactuca sativa HOM05D000101 ORTHO05D007021 6.0e-26 121.3 90 65.6
MBI15_g46843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 7.8e-26 120.9 91 63.7
CDE04G1472 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 1.7e-25 119.8 87 63.2
CDE06G1918 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 3.9e-25 118.6 87 62.1
SHI24924 Sapria himalayana HOM05D000101 ORTHO05D007021 1.5e-24 116.7 92 60.9
SEGI_13887 Sequoiadendron giganteum HOM05D000101 ORTHO05D007021 1.1e-22 110.5 88 62.5
HPP92_017376 Vanilla planifolia HOM05D000101 ORTHO05D007021 4.0e-22 108.6 88 58.0
Mapoly0016s0014 Marchantia polymorpha HOM05D000101 ORTHO05D007021 3.8e-20 102.1 94 56.4
SMO119G0082 Selaginella moellendorffii HOM05D000101 ORTHO05D007021 2.4e-19 99.4 88 56.8
BcaC01g02229 Brassica carinata HOM05D000101 ORTHO05D007021 5.4e-19 98.2 125 43.2
AagrBONN_evm.TU.Sc2ySwM_228.724 Anthoceros agrestis HOM05D000101 ORTHO05D007021 4.6e-18 95.1 92 50.0
Os02g0140300 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 8.7e-17 90.9 91 51.6
Pp3c13_8000 Physcomitrium patens HOM05D000101 ORTHO05D007021 8.7e-17 90.9 93 51.6
BcaB02g08904 Brassica carinata HOM05D005622 ORTHO05D002854 1.3e-15 87.0 59 69.5
Zm00001eb208120 Zea mays HOM05D000101 ORTHO05D007021 2.8e-15 85.9 88 53.4
Cre07.g322250 Chlamydomonas reinhardtii HOM05D000101 ORTHO05D007021 3.4e-13 79.0 80 41.2
C04p70760 Brassica napus HOM05D000101 ORTHO05D007021 1.9e-11 73.2 52 65.4
BolC4t28578H Brassica oleracea HOM05D000101 ORTHO05D007021 1.9e-11 73.2 52 65.4
CBR_g72677 Chara braunii HOM05D000101 ORTHO05D007021 4.6e-10 68.6 88 39.8
C03p67630 Brassica napus HOM05D000101 ORTHO05D007021 5.6e-08 61.6 125 32.0
BolSC21t60259H Brassica oleracea HOM05D000101 ORTHO05D007021 5.6e-08 61.6 125 32.0
Atru.chr5.404 Acer truncatum HOM05D000101 ORTHO05D007021 7.4e-08 61.2 33 81.8
MCO04G049 Micromonas commoda HOM05D000101 ORTHO05D007021 2.8e-07 59.3 80 38.8
Cfa024344 Carpinus fangiana HOM05D000101 ORTHO05D007021 8.1e-07 57.8 70 37.1
Aqoxy102s002 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 1.8e-06 56.6 33 78.8
PRCOL_00006009 Prasinoderma coloniale HOM05D000101 ORTHO05D007021 5.3e-06 55.1 68 42.6


User provided reference genes

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