Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.0e-207 726.5 360 100.0
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.2e-157 557.4 362 76.8
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.2e-144 516.9 353 73.1
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.2e-138 496.1 350 71.4
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.7e-136 489.2 350 68.9
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.0e-135 485.7 342 71.9
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 3.3e-134 482.3 356 65.7
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 3.3e-134 482.3 356 66.9
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 6.3e-133 478.0 359 67.4
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.1e-132 475.7 351 65.8
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 7.0e-132 474.6 361 65.1
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 3.5e-131 472.2 354 65.3
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 5.0e-130 468.4 353 65.4
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-129 467.2 351 67.5
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 7.2e-129 464.5 351 65.5
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.1e-128 463.0 354 63.0
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.3e-127 459.5 358 63.1
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 8.8e-127 457.6 351 63.8
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.2e-126 457.2 360 61.1
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.5e-126 456.8 358 64.2
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.0e-126 456.4 352 63.6
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.0e-126 456.4 349 63.9
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.3e-125 453.8 350 65.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.2e-125 453.0 293 77.5
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 6.3e-125 451.4 349 63.0
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 8.3e-125 451.1 355 64.5
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.4e-124 450.3 350 62.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 5.4e-124 448.4 351 61.8
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 9.1e-124 447.6 353 62.6
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 1.2e-123 447.2 343 64.7
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.0e-123 446.4 357 61.9
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.0e-123 446.4 357 61.3
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.7e-123 446.0 348 63.5
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.5e-123 445.3 351 62.7
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 2.9e-122 442.6 361 62.3
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 2.5e-121 439.5 328 67.7
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.5e-121 439.5 309 65.7
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-121 438.7 304 69.1
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 5.5e-121 438.3 352 61.9
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 9.4e-121 437.6 349 63.0
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.6e-120 436.8 350 60.6
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.1e-120 436.4 350 59.7
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 3.6e-120 435.6 352 61.1
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.0e-120 434.5 350 60.3
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.0e-119 434.1 345 62.0
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.0e-119 434.1 418 53.8
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.0e-119 432.6 412 55.6
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 4.0e-119 432.2 358 62.6
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 5.2e-119 431.8 350 61.1
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 6.8e-119 431.4 360 59.2
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.8e-119 431.0 349 60.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-118 429.9 345 61.2
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.6e-118 429.5 304 66.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 4.4e-118 428.7 348 58.9
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 4.4e-118 428.7 403 57.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.7e-117 426.8 358 60.6
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 8.3e-117 424.5 358 60.1
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.1e-116 424.1 357 59.9
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.4e-116 423.7 305 66.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 7.0e-116 421.4 362 59.4
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.2e-115 420.6 346 60.1
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.3e-114 417.2 346 59.5
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.7e-114 416.8 354 57.3
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 2.3e-114 416.4 314 64.6
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.8e-114 415.6 326 66.3
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-113 414.1 307 64.8
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 7.2e-113 411.4 345 56.5
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 7.2e-113 411.4 337 59.6
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 3.6e-112 409.1 343 58.3
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.0e-111 407.5 345 58.6
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-111 407.1 345 58.6
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.2e-110 404.1 354 57.6
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.5e-110 403.7 354 57.1
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.4e-110 402.5 307 63.2
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 5.7e-110 401.7 354 57.3
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.7e-109 400.2 317 60.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.7e-109 400.2 301 62.5
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.7e-109 400.2 348 58.6
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.9e-109 399.4 283 66.4
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.9e-109 398.7 366 53.8
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 5.4e-108 395.2 351 56.7
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 5.4e-108 395.2 322 62.1
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.5e-107 392.5 350 56.0
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 4.6e-107 392.1 359 56.5
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.3e-106 390.6 349 56.2
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 2.9e-106 389.4 318 60.1
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 8.6e-106 387.9 319 62.1
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-105 387.5 329 57.1
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.8e-103 380.2 295 60.7
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.7e-99 366.3 255 68.6
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.5e-97 360.5 366 50.3
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.8e-95 351.7 248 68.5
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.7e-93 345.9 249 67.5
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 7.3e-89 331.6 337 51.6
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.6e-86 323.2 366 47.5
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 2.6e-86 323.2 247 60.7
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 5.1e-82 308.9 236 62.7
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.4e-79 300.8 314 51.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.4e-68 264.2 263 52.5
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.7e-67 260.0 232 53.0
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 4.6e-67 259.2 356 43.8
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 6.6e-66 255.4 219 58.4
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 7.3e-65 251.9 210 61.0
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.3e-64 251.1 197 59.9
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.3e-63 245.7 277 48.0
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 9.0e-63 245.0 295 41.4
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.0e-53 214.9 181 60.2
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 7.1e-52 208.8 192 52.6
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 6.0e-51 205.7 255 42.4
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.5e-49 201.1 286 40.2
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.3e-49 199.5 154 57.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 5.9e-46 189.1 160 55.0
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 2.2e-45 187.2 192 53.1
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 1.8e-42 177.6 200 46.5
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.4e-39 167.2 186 48.4
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 2.5e-33 147.1 169 50.9
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 7.4e-33 145.6 115 60.9
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.8e-31 141.0 175 44.6
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 1.0e-26 125.2 184 44.0
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.3e-26 124.0 88 62.5
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.0e-25 120.9 231 38.5
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 2.6e-25 120.6 93 61.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 1.7e-24 117.9 329 30.7
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.1e-23 113.2 141 46.8
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.0e-23 112.5 348 28.4
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.6e-22 111.3 103 54.4
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.7e-22 109.0 206 34.0
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.2e-21 107.5 100 56.0
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 3.8e-21 106.7 99 54.5
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.1e-20 105.1 77 63.6
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 7.2e-20 102.4 186 36.0
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.1e-17 95.1 66 63.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 2.0e-17 94.4 60 71.7
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.7e-16 91.3 105 49.5
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 2.8e-16 90.5 164 32.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.7e-14 82.4 246 26.8
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 6.5e-13 79.3 288 26.0
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 8.5e-13 79.0 70 55.7
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 4.2e-12 76.6 58 60.3
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 6.8e-10 69.3 277 24.2
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.0e-09 67.8 253 25.7
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.8e-07 61.2 62 45.2
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 2.4e-07 60.8 192 26.0


User provided reference genes

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