Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 1.9e-125 452.6 244 100.0
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 1.6e-108 396.4 244 84.4
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 6.9e-107 391.0 244 84.4
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 3.5e-103 378.6 245 81.6
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 3.3e-101 372.1 244 79.5
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 9.6e-101 370.5 244 81.1
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 3.7e-100 368.6 286 73.4
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 8.1e-100 367.5 244 80.3
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 1.4e-99 366.7 244 79.9
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 5.3e-99 364.8 244 79.1
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 1.3e-97 360.1 244 80.3
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 1.7e-97 359.8 244 78.7
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 1.7e-97 359.8 317 64.0
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 4.9e-97 358.2 244 77.5
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 6.4e-97 357.8 244 77.5
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 1.9e-96 356.3 244 78.7
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.9e-96 356.3 245 78.4
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 2.4e-96 355.9 240 78.8
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 2.4e-96 355.9 244 78.3
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 4.2e-96 355.1 244 77.9
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 4.2e-96 355.1 244 78.3
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.6e-95 353.2 244 76.6
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 2.1e-95 352.8 244 76.6
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 2.1e-95 352.8 239 77.8
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 3.5e-95 352.1 244 79.9
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 1.0e-94 350.5 245 77.1
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 1.0e-94 350.5 244 77.9
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.0e-94 350.5 244 76.6
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 2.3e-94 349.4 244 77.5
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 3.0e-94 349.0 240 77.9
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 3.9e-94 348.6 244 77.5
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 3.9e-94 348.6 244 78.3
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 5.1e-94 348.2 244 77.0
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 1.5e-93 346.7 244 77.0
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.5e-93 346.7 244 77.9
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 1.9e-93 346.3 244 76.2
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 1.9e-93 346.3 240 77.1
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 1.9e-93 346.3 244 76.2
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 2.5e-93 345.9 244 78.3
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 4.3e-93 345.1 244 77.0
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 5.6e-93 344.7 244 76.6
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 9.6e-93 344.0 245 75.9
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 9.6e-93 344.0 244 76.2
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 1.3e-92 343.6 244 76.2
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 1.6e-92 343.2 243 76.5
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 2.1e-92 342.8 230 80.4
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 2.8e-92 342.4 244 75.4
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 3.7e-92 342.0 244 75.4
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 3.7e-92 342.0 244 76.2
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 1.1e-91 340.5 244 75.8
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 1.4e-91 340.1 244 74.6
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 1.4e-91 340.1 244 74.6
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.4e-91 340.1 244 75.4
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.2e-90 337.0 244 75.4
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.7e-89 333.2 232 75.9
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 1.7e-89 333.2 244 72.5
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 2.2e-89 332.8 244 75.8
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 2.2e-89 332.8 285 66.0
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 3.8e-89 332.0 244 74.6
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 3.8e-89 332.0 244 72.1
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 4.9e-89 331.6 223 78.5
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 4.9e-89 331.6 245 73.5
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 6.5e-89 331.3 244 73.4
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 8.4e-89 330.9 244 72.5
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 8.4e-89 330.9 244 72.5
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 3.2e-88 328.9 282 66.0
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 9.3e-88 327.4 245 72.2
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 9.3e-88 327.4 245 71.8
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.2e-87 327.0 196 86.7
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 1.2e-87 327.0 244 71.3
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 1.6e-87 326.6 244 71.3
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 2.1e-87 326.2 244 72.1
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 3.5e-87 325.5 244 70.1
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 3.5e-87 325.5 197 86.3
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 4.6e-87 325.1 245 73.5
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 6.0e-87 324.7 259 69.1
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.0e-86 323.9 259 69.1
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 1.3e-86 323.6 245 71.4
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.3e-86 322.8 244 69.3
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 5.1e-86 321.6 196 84.2
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 8.7e-86 320.9 244 70.1
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 1.1e-85 320.5 245 72.7
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 1.1e-85 320.5 196 84.7
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 5.7e-85 318.2 235 72.3
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 5.7e-85 318.2 244 70.1
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 5.7e-85 318.2 230 71.7
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 7.4e-85 317.8 196 83.7
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 7.4e-85 317.8 244 68.9
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 7.4e-85 317.8 244 70.5
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 9.7e-85 317.4 244 68.9
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 1.6e-84 316.6 226 76.1
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 1.6e-84 316.6 244 68.0
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 4.8e-84 315.1 244 68.0
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 8.2e-84 314.3 244 68.4
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 8.2e-84 314.3 244 68.4
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 8.2e-84 314.3 244 68.4
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 8.2e-84 314.3 248 67.3
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 1.1e-83 313.9 280 63.6
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 1.1e-83 313.9 246 67.5
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 1.4e-83 313.5 244 68.0
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 1.8e-83 313.2 244 68.0
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 1.8e-83 313.2 245 69.8
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 2.4e-83 312.8 196 82.1
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 2.4e-83 312.8 244 67.6
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 2.4e-83 312.8 244 67.6
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 2.4e-83 312.8 238 69.7
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 3.1e-83 312.4 246 70.3
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 4.1e-83 312.0 246 67.5
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 9.0e-83 310.8 244 67.2
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 9.0e-83 310.8 244 67.6
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 1.2e-82 310.5 196 83.2
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.5e-82 310.1 244 68.0
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.0e-82 309.7 199 81.9
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.6e-82 309.3 199 82.4
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 2.6e-82 309.3 223 74.9
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 2.6e-82 309.3 244 68.4
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.4e-82 308.9 199 81.9
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 4.5e-82 308.5 244 66.0
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 4.5e-82 308.5 223 74.9
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.9e-81 305.8 199 81.4
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 6.5e-81 304.7 244 65.6
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 8.5e-81 304.3 247 70.0
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 8.5e-81 304.3 245 66.9
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 1.2e-79 300.4 230 69.6
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 1.6e-79 300.1 245 65.7
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 2.7e-79 299.3 293 59.0
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 1.5e-74 283.5 196 72.4
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 1.5e-69 266.9 175 78.9
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.8e-67 260.0 223 66.8
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.6e-66 256.1 182 73.6
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 2.9e-65 252.7 188 69.1
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 2.7e-63 246.1 245 58.8
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.5e-61 240.4 196 68.9
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 5.9e-58 228.4 155 78.1
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 5.5e-56 221.9 226 56.6
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 1.4e-54 217.2 135 80.0
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 3.5e-50 202.6 155 66.5
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 4.2e-40 169.1 149 62.4
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 1.8e-38 163.7 112 75.0
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 2.8e-36 156.4 171 55.0
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 1.6e-34 150.6 133 60.9
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 2.0e-34 150.2 224 41.5
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 6.1e-31 138.7 188 50.0
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 3.4e-29 132.9 235 34.0
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 3.7e-28 129.4 217 37.3
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 6.4e-28 128.6 100 66.0
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 1.9e-27 127.1 131 57.3
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 7.8e-26 121.7 236 39.0
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 8.0e-23 111.7 178 36.0
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 4.0e-22 109.4 194 33.5
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 2.4e-19 100.1 63 84.1
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 2.7e-18 96.7 83 60.2
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 8.6e-17 91.7 181 42.5
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 1.8e-14 84.0 84 58.3
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 4.9e-12 75.9 64 67.2
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 9.2e-11 71.6 217 29.0
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 1.1e-06 58.2 40 77.5
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 1.4e-06 57.8 50 64.0


User provided reference genes

Program Settings