Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 5.8e-30 134.4 122 100.0
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 9.3e-12 73.9 144 52.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.6e-11 73.2 75 84.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 2.1e-11 72.8 107 56.1
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-11 72.8 109 59.6
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-10 70.5 75 65.3
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.3e-10 70.1 75 82.7
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.3e-10 70.1 73 78.1
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.8e-10 69.7 75 65.3
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.0e-10 68.9 75 82.7
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.0e-10 68.9 75 82.7
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 5.1e-10 68.2 77 74.0
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 8.7e-10 67.4 75 53.3
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-09 67.0 75 84.0
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-09 66.6 143 54.5
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 5.6e-09 64.7 76 80.3
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.6e-09 64.7 141 46.1
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 5.6e-09 64.7 75 84.0
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 7.4e-09 64.3 75 72.0
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 7.4e-09 64.3 73 80.8
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 7.4e-09 64.3 72 73.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.3e-08 63.5 75 73.3
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 1.3e-08 63.5 75 73.3
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.6e-08 63.2 97 59.8
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.8e-08 62.4 75 76.0
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 3.7e-08 62.0 66 86.4
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.7e-08 62.0 68 70.6
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 4.8e-08 61.6 121 48.8
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 6.2e-08 61.2 74 62.2
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 6.2e-08 61.2 72 66.7
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 6.2e-08 61.2 67 80.6
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 8.1e-08 60.8 75 80.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 121 52.1
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.8e-07 59.7 75 76.0
Os11g0167800 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.4e-07 59.3 89 79.8
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 3.1e-07 58.9 75 72.0
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 3.1e-07 58.9 67 77.6
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.1e-07 58.9 68 83.8
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.1e-07 58.9 68 83.8
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 3.1e-07 58.9 75 64.0
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 4.0e-07 58.5 74 71.6
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 4.0e-07 58.5 74 71.6
Prupe.8G034200 Prunus persica HOM05D002879 ORTHO05D002930 4.0e-07 58.5 68 82.4
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.0e-07 58.5 99 61.6
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 5.3e-07 58.2 142 54.2
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.3e-07 58.2 108 50.0
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.3e-07 58.2 64 82.8
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 5.3e-07 58.2 63 71.4
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 5.3e-07 58.2 74 47.3
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 6.9e-07 57.8 74 78.4
Zm00001eb407710 Zea mays HOM05D002879 ORTHO05D002930 6.9e-07 57.8 70 82.9
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 9.0e-07 57.4 72 81.9
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 9.0e-07 57.4 78 55.1
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.2e-06 57.0 131 57.3
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.2e-06 57.0 74 66.2
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.5e-06 56.6 72 68.1
Sopen04g027610 Solanum pennellii HOM05D002879 ORTHO05D002930 2.0e-06 56.2 70 77.1
SGA_v2.0_scaffold195G40794 Striga asiatica HOM05D002879 ORTHO05D002930 2.0e-06 56.2 68 85.3
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.0e-06 56.2 74 67.6
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.0e-06 56.2 74 70.3
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 2.6e-06 55.8 75 78.7
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 3.4e-06 55.5 75 76.0
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.4e-06 55.5 71 70.4
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 3.4e-06 55.5 71 70.4
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 4.5e-06 55.1 70 64.3
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.5e-06 55.1 29 79.3
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.5e-06 55.1 29 82.8
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 7.6e-06 54.3 65 75.4
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 7.6e-06 54.3 68 73.5
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 7.6e-06 54.3 74 52.7
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 7.6e-06 54.3 63 73.0
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.6e-06 54.3 29 79.3
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.6e-06 54.3 72 76.4
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.6e-06 54.3 74 67.6
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.6e-06 54.3 71 69.0
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.0e-05 53.9 29 79.3
AUR62040592 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.0e-05 53.9 67 83.6
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.0e-05 53.9 29 79.3
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 1.0e-05 53.9 68 57.4
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.0e-05 53.9 29 82.8


User provided reference genes

Program Settings