Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 6.1e-132 474.2 242 100.0
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 1.2e-74 283.9 236 65.7
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.1e-72 277.3 241 65.1
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.4e-72 276.9 245 63.7
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 3.9e-70 268.9 243 60.9
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 6.7e-70 268.1 243 62.6
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 1.5e-69 266.9 243 60.9
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.9e-69 266.5 215 67.0
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 9.6e-69 264.2 232 63.4
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.2e-66 257.3 240 60.0
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 3.4e-66 255.8 245 58.8
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 2.9e-65 252.7 225 60.9
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.1e-64 250.8 233 63.9
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 9.3e-64 247.7 239 56.1
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 9.3e-64 247.7 248 56.0
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 7.9e-63 244.6 202 62.4
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.3e-62 243.8 218 62.8
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.3e-62 243.8 229 60.7
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.3e-62 243.0 237 58.2
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 8.7e-62 241.1 246 55.7
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.3e-60 237.3 229 56.3
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.8e-59 233.4 219 62.6
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 3.1e-59 232.6 227 57.7
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.1e-59 232.6 218 59.2
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.1e-59 232.6 229 57.6
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 3.1e-59 232.6 238 54.2
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 3.1e-59 232.6 237 54.9
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.2e-58 230.7 247 55.5
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.6e-58 229.6 229 57.2
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.6e-58 229.6 256 54.7
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.4e-58 229.2 242 54.5
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 5.8e-58 228.4 244 54.5
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 7.6e-58 228.0 216 61.6
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.0e-57 227.6 236 55.1
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.3e-57 227.3 219 55.7
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.3e-57 227.3 236 55.1
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.3e-57 227.3 246 53.3
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.3e-57 227.3 229 57.6
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.7e-57 226.9 240 54.6
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 2.2e-57 226.5 231 55.0
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.2e-57 226.5 242 55.0
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 3.8e-57 225.7 236 54.7
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 5.0e-57 225.3 240 54.2
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 8.4e-57 224.6 241 52.7
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 8.4e-57 224.6 241 52.7
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.1e-56 224.2 238 55.0
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.5e-56 223.0 236 53.8
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 7.2e-56 221.5 235 52.8
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 9.3e-56 221.1 224 55.4
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.2e-55 220.7 242 52.5
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.6e-55 220.3 245 48.2
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 2.1e-55 219.9 244 52.5
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.1e-55 219.9 247 54.7
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 2.7e-55 219.5 243 52.7
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 3.5e-55 219.2 237 50.2
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 3.5e-55 219.2 235 53.6
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 7.9e-55 218.0 240 52.1
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 1.0e-54 217.6 238 51.3
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.0e-54 217.6 236 51.3
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.3e-54 217.2 240 51.2
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.8e-54 216.9 218 55.5
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 2.3e-54 216.5 246 52.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 3.0e-54 216.1 237 52.3
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 5.1e-54 215.3 227 52.9
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 5.1e-54 215.3 247 53.0
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 8.7e-54 214.5 247 53.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 8.7e-54 214.5 247 53.0
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 1.1e-53 214.2 235 51.9
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.1e-53 214.2 220 55.5
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.5e-53 213.8 244 50.4
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.5e-53 213.8 252 48.4
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.9e-53 213.4 233 53.6
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.9e-53 213.4 250 50.0
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.9e-53 213.4 250 50.0
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 2.5e-53 213.0 247 52.6
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.3e-53 212.2 210 52.9
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 4.3e-53 212.2 217 55.8
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 2.2e-52 209.9 244 52.0
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.8e-52 209.5 201 59.7
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 2.8e-52 209.5 221 51.1
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 3.7e-52 209.1 229 55.0
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.1e-51 207.6 240 52.9
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 1.4e-51 207.2 235 49.8
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.1e-51 206.1 214 55.1
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 3.1e-51 206.1 247 48.2
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 3.1e-51 206.1 237 49.4
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 5.3e-51 205.3 242 54.1
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 9.0e-51 204.5 242 47.9
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.2e-50 204.1 220 51.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.5e-50 203.8 220 53.2
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 7.7e-50 201.4 259 45.9
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 6.5e-49 198.4 246 49.2
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.9e-48 196.8 224 49.1
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 7.2e-48 194.9 191 51.3
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 7.2e-48 194.9 279 43.4
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.1e-47 193.4 216 51.4
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 3.6e-47 192.6 242 45.0
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 7.9e-47 191.4 237 47.7
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 6.7e-46 188.3 267 43.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.5e-45 187.2 231 48.5
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.5e-45 187.2 231 48.5
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.5e-45 186.4 245 46.1
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 3.3e-45 186.0 232 47.8
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 7.4e-45 184.9 205 54.6
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.3e-44 184.1 222 50.5
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 3.7e-44 182.6 229 47.6
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 4.8e-44 182.2 212 51.4
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 4.8e-44 182.2 189 54.0
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 6.3e-44 181.8 201 54.7
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 1.0e-41 174.5 217 49.8
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.5e-41 171.4 250 49.6
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 9.4e-40 167.9 208 46.6
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.2e-39 167.5 241 44.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.6e-39 167.2 245 45.7
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 2.7e-39 166.4 240 45.0
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 6.1e-39 165.2 245 45.7
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.0e-38 164.5 212 44.8
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 5.1e-38 162.2 235 46.0
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 7.4e-37 158.3 177 50.8
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 1.7e-36 157.1 188 48.9
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 7.0e-35 151.8 139 55.4
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 8.0e-31 138.3 150 58.0
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.0e-29 133.7 227 37.4
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 2.0e-21 107.1 64 81.2
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 9.8e-21 104.8 128 51.6
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.3e-20 104.4 94 63.8
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.7e-20 104.0 229 37.6
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.3e-14 83.6 111 45.0
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.2e-10 71.2 157 35.0
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 1.6e-07 60.8 160 30.6
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 4.7e-07 59.3 115 33.9
Zm00001eb362470 Zea mays HOM05D037132 ORTHO05D037045 1.8e-06 57.4 117 35.9


User provided reference genes

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