Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 1.2e-106 389.8 194 100.0
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 4.4e-40 168.7 206 48.1
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 2.2e-39 166.4 190 53.7
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 1.1e-35 154.1 154 56.5
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 1.1e-35 154.1 182 50.0
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 5.6e-35 151.8 191 49.2
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 1.2e-34 150.6 184 48.9
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 2.8e-34 149.4 186 49.5
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.8e-34 149.4 156 52.6
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 8.1e-34 147.9 156 53.2
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 1.1e-33 147.5 186 46.2
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 1.8e-33 146.7 88 79.5
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 1.8e-33 146.7 196 47.4
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 6.8e-33 144.8 186 45.7
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 8.9e-33 144.4 168 46.4
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 1.2e-32 144.1 166 53.0
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.2e-32 144.1 98 68.4
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.6e-32 142.9 108 63.9
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 3.4e-32 142.5 88 77.3
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 4.4e-32 142.1 190 46.8
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 5.8e-32 141.7 88 75.0
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 7.5e-32 141.4 190 47.4
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 9.8e-32 141.0 88 76.1
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 2.2e-31 139.8 167 47.9
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.9e-31 139.4 107 62.6
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 2.9e-31 139.4 183 44.8
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 3.7e-31 139.0 107 62.6
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 4.9e-31 138.7 163 50.3
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 6.4e-31 138.3 121 57.0
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 1.1e-30 137.5 100 66.0
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.1e-30 137.5 117 56.4
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 1.1e-30 137.5 119 54.6
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.4e-30 137.1 193 46.1
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.4e-30 137.1 154 49.4
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 1.4e-30 137.1 88 70.5
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 2.4e-30 136.3 174 48.3
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 3.2e-30 136.0 94 67.0
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 5.4e-30 135.2 92 68.5
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 7.1e-30 134.8 92 68.5
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 7.1e-30 134.8 92 68.5
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 1.2e-29 134.0 88 69.3
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 1.2e-29 134.0 168 45.2
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 1.6e-29 133.7 182 42.3
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 2.1e-29 133.3 187 42.2
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.1e-29 133.3 104 67.3
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 2.1e-29 133.3 105 61.0
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 2.7e-29 132.9 104 60.6
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 2.7e-29 132.9 198 42.9
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 4.6e-29 132.1 157 46.5
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 6.0e-29 131.7 93 71.0
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 7.8e-29 131.3 149 50.3
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 7.8e-29 131.3 128 55.5
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 7.8e-29 131.3 88 67.0
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 7.8e-29 131.3 156 46.2
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 7.8e-29 131.3 88 68.2
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 7.8e-29 131.3 93 65.6
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 1.7e-28 130.2 97 60.8
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 1.7e-28 130.2 149 49.0
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 2.3e-28 129.8 88 65.9
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 3.0e-28 129.4 191 39.8
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 3.9e-28 129.0 101 65.3
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 3.9e-28 129.0 154 44.8
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 3.9e-28 129.0 176 46.0
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 3.9e-28 129.0 103 58.3
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 6.6e-28 128.3 177 42.9
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 6.6e-28 128.3 191 39.3
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 6.6e-28 128.3 171 41.5
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 6.6e-28 128.3 99 61.6
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 1.1e-27 127.5 183 43.2
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 1.1e-27 127.5 183 43.2
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 1.1e-27 127.5 95 58.9
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.1e-27 127.5 193 39.9
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 1.1e-27 127.5 154 48.7
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 1.9e-27 126.7 93 62.4
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 1.9e-27 126.7 191 38.7
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 1.9e-27 126.7 93 64.5
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 3.3e-27 125.9 95 61.1
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 3.3e-27 125.9 93 64.5
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 4.3e-27 125.6 86 68.6
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 4.3e-27 125.6 150 46.0
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 5.6e-27 125.2 192 39.1
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 7.3e-27 124.8 139 43.9
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 9.5e-27 124.4 147 42.9
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 9.5e-27 124.4 87 70.1
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 9.5e-27 124.4 87 70.1
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.2e-26 124.0 95 57.9
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 2.1e-26 123.2 94 58.5
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 2.1e-26 123.2 197 41.6
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 2.1e-26 123.2 155 45.2
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 3.6e-26 122.5 94 64.9
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.6e-26 122.5 174 40.8
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 8.1e-26 121.3 92 63.0
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 8.1e-26 121.3 98 61.2
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.1e-25 120.9 141 42.6
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 1.4e-25 120.6 137 44.5
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.4e-25 120.6 181 39.8
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 1.8e-25 120.2 115 53.0
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 2.3e-25 119.8 95 57.9
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 3.1e-25 119.4 99 61.6
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 3.1e-25 119.4 166 40.4
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 4.0e-25 119.0 147 43.5
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 4.0e-25 119.0 175 40.6
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 5.2e-25 118.6 167 44.3
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 6.8e-25 118.2 88 61.4
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 8.9e-25 117.9 119 49.6
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 8.9e-25 117.9 111 49.5
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 2.0e-24 116.7 118 50.0
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.0e-24 116.7 93 60.2
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 3.4e-24 115.9 109 53.2
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 5.8e-24 115.2 94 58.5
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 7.6e-24 114.8 99 59.6
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 7.6e-24 114.8 99 59.6
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 9.9e-24 114.4 142 47.9
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 1.3e-23 114.0 200 39.5
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.3e-23 114.0 178 42.1
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 4.9e-23 112.1 90 64.4
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 4.9e-23 112.1 178 40.4
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 6.4e-23 111.7 90 63.3
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 6.4e-23 111.7 188 40.4
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 6.4e-23 111.7 100 53.0
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 1.1e-22 110.9 90 63.3
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 1.1e-22 110.9 90 63.3
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 1.4e-22 110.5 188 40.4
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 1.9e-22 110.2 194 35.1
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 1.9e-22 110.2 87 58.6
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 1.9e-22 110.2 194 35.1
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 1.9e-22 110.2 87 58.6
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 2.4e-22 109.8 116 50.0
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 3.2e-22 109.4 147 44.9
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 4.1e-22 109.0 87 63.2
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 7.1e-22 108.2 188 39.9
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 9.2e-22 107.8 175 36.6
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 1.2e-21 107.5 97 51.5
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 1.2e-21 107.5 224 34.8
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 2.1e-21 106.7 94 52.1
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 2.7e-21 106.3 107 50.5
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 7.8e-21 104.8 97 54.6
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 7.8e-21 104.8 97 54.6
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 7.8e-21 104.8 97 54.6
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 7.8e-21 104.8 169 40.8
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.3e-20 104.0 89 59.6
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.3e-20 104.0 89 59.6
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 1.7e-20 103.6 89 60.7
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 2.3e-20 103.2 176 39.8
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 4.7e-18 95.5 104 46.2
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 4.7e-18 95.5 89 46.1
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 8.1e-18 94.7 87 57.5
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.4e-17 94.0 162 38.9
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.4e-17 94.0 162 38.9
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 1.4e-17 94.0 88 55.7
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 1.8e-17 93.6 91 52.7
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 2.4e-17 93.2 55 85.5
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 6.9e-17 91.7 87 54.0
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 9.9e-16 87.8 55 80.0
SEGI_28614 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 9.9e-16 87.8 148 37.8
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 2.2e-15 86.7 92 43.5
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 2.9e-15 86.3 87 49.4
Glyma.04G111000 Glycine max HOM05D003874 ORTHO05D004545 2.4e-14 83.2 90 46.7
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 7.1e-14 81.6 132 36.4
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 9.3e-14 81.3 115 35.7
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 9.3e-14 81.3 133 33.1
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 9.3e-14 81.3 153 31.4
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 1.6e-13 80.5 105 41.0
Zm00001eb366050 Zea mays HOM05D003874 ORTHO05D004545 3.0e-12 76.3 185 30.3
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 1.9e-11 73.6 99 47.5
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 5.3e-09 65.5 206 25.2
Zm00001eb145550 Zea mays HOM05D003874 ORTHO05D004545 9.9e-08 61.2 183 29.0
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 4.2e-06 55.8 84 46.4
SEGI_24660 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 4.2e-06 55.8 150 31.3
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 5.4e-06 55.5 93 31.2


User provided reference genes

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