Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 3.0e-30 134.4 64 100.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.4e-27 124.8 64 89.1
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 2.0e-26 121.7 64 89.1
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.5e-26 120.6 63 87.3
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.3e-25 119.0 63 85.7
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 2.3e-25 118.2 64 82.8
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 2.3e-25 118.2 63 84.1
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 2.9e-25 117.9 64 85.9
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 3.8e-25 117.5 64 82.8
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 6.6e-25 116.7 64 84.4
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.1e-24 115.9 63 84.1
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.9e-24 115.2 64 79.7
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 3.3e-24 114.4 60 85.0
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 3.3e-24 114.4 63 81.0
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 4.3e-24 114.0 64 79.7
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 5.6e-24 113.6 61 85.2
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 5.6e-24 113.6 64 82.8
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 7.3e-24 113.2 64 78.1
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 7.3e-24 113.2 60 83.3
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 7.3e-24 113.2 60 83.3
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.2e-23 112.5 64 81.2
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 1.6e-23 112.1 72 75.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 3.6e-23 110.9 61 82.0
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 3.6e-23 110.9 64 78.1
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 4.7e-23 110.5 59 84.7
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 78.1
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 78.1
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 78.1
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 78.1
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 2.3e-22 108.2 64 75.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 2.3e-22 108.2 64 75.0
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 4.0e-22 107.5 62 80.6
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 4.0e-22 107.5 64 78.1
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 8.9e-22 106.3 64 78.1
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 1.2e-21 105.9 64 76.6
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.5e-21 105.5 64 78.1
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.5e-21 105.5 63 73.0
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.0e-21 105.1 59 78.0
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 2.6e-21 104.8 60 76.7
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 3.4e-21 104.4 64 75.0
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 3.4e-21 104.4 64 75.0
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 5.7e-21 103.6 61 78.7
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 7.5e-21 103.2 62 77.4
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 9.8e-21 102.8 64 73.4
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 9.8e-21 102.8 64 73.4
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 2.2e-20 101.7 60 76.7
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 2.2e-20 101.7 74 66.2
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 4.9e-20 100.5 60 76.7
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 9.2e-19 96.3 62 74.2
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 9.2e-19 96.3 58 75.9
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.2e-18 95.9 53 79.2
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 2.7e-18 94.7 60 73.3
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 5.9e-18 93.6 53 77.4
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.3e-17 92.4 62 71.0
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 4.3e-16 87.4 55 65.5
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 6.2e-15 83.6 64 65.6
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 8.0e-15 83.2 58 62.1
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.4e-14 82.4 53 67.9
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 3.4e-13 77.8 59 50.8
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 4.4e-13 77.4 61 57.4
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.9e-11 72.0 58 60.3
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 5.4e-11 70.5 64 56.2
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 5.4e-11 70.5 64 56.2
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 7.0e-11 70.1 64 54.7
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 7.0e-11 70.1 45 68.9
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 9.2e-11 69.7 64 56.2
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 1.2e-10 69.3 64 56.2
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 2.0e-10 68.6 63 52.4
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 6.0e-10 67.0 64 53.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 6.6e-09 63.5 36 75.0
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 5.6e-08 60.5 57 47.4
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 7.3e-08 60.1 29 93.1
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 2.8e-07 58.2 29 93.1
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 4.7e-07 57.4 63 42.9
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 6.2e-07 57.0 29 89.7
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 6.2e-07 57.0 29 89.7
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 8.1e-07 56.6 29 86.2
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.4e-06 55.8 32 68.8


User provided reference genes

Program Settings