Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 1.1e-170 603.2 310 100.0
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 4.0e-120 435.3 312 75.0
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 2.9e-118 429.1 312 73.4
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 4.2e-117 425.2 309 72.8
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 7.1e-117 424.5 309 73.5
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 9.3e-117 424.1 312 71.5
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 1.6e-116 423.3 312 73.1
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 3.5e-116 422.2 310 73.9
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 7.9e-116 421.0 338 68.0
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 2.3e-115 419.5 312 72.4
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 5.1e-115 418.3 312 72.4
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 8.7e-115 417.5 310 71.9
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 8.7e-115 417.5 309 71.5
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 8.7e-115 417.5 309 72.2
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 1.1e-114 417.2 312 72.1
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 1.1e-114 417.2 311 71.1
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 1.5e-114 416.8 318 70.4
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.5e-114 416.8 309 71.5
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 1.5e-114 416.8 312 72.1
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 1.9e-114 416.4 309 71.5
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 2.5e-114 416.0 312 71.8
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 3.3e-114 415.6 308 71.4
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 3.3e-114 415.6 309 71.2
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 4.3e-114 415.2 309 71.2
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 5.6e-114 414.8 309 71.2
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 5.6e-114 414.8 309 70.9
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 7.4e-114 414.5 309 71.5
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 9.6e-114 414.1 309 70.9
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 2.1e-113 412.9 310 69.7
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 3.7e-113 412.1 311 69.5
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 3.7e-113 412.1 309 70.9
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 4.8e-113 411.8 310 70.3
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 6.2e-113 411.4 309 71.2
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 6.2e-113 411.4 312 71.8
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 1.1e-112 410.6 311 69.1
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 1.1e-112 410.6 309 70.6
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.4e-112 410.2 312 70.5
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 1.8e-112 409.8 312 70.8
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 4.0e-112 408.7 312 69.6
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 4.0e-112 408.7 309 70.2
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 5.3e-112 408.3 309 71.2
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 6.9e-112 407.9 312 69.6
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 9.0e-112 407.5 312 71.2
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 9.0e-112 407.5 312 70.2
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 9.0e-112 407.5 310 68.7
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 1.5e-111 406.8 310 69.4
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.0e-111 406.4 312 68.6
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 2.6e-111 406.0 312 70.2
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 3.4e-111 405.6 312 70.5
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.5e-111 405.2 308 70.5
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 5.8e-111 404.8 312 68.6
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 5.8e-111 404.8 310 68.7
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 1.0e-110 404.1 312 69.6
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 1.0e-110 404.1 312 69.6
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 1.3e-110 403.7 310 68.1
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 1.7e-110 403.3 309 69.3
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 3.8e-110 402.1 312 68.6
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 6.5e-110 401.4 306 70.3
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 6.5e-110 401.4 312 68.9
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 6.5e-110 401.4 312 68.9
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 1.4e-109 400.2 312 68.9
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 1.4e-109 400.2 311 68.5
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 1.9e-109 399.8 312 68.9
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 1.9e-109 399.8 312 68.6
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 3.2e-109 399.1 312 68.9
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 5.5e-109 398.3 312 67.6
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 5.5e-109 398.3 312 69.2
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 9.3e-109 397.5 312 69.6
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.2e-108 397.1 308 68.8
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 1.6e-108 396.7 312 68.9
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 2.7e-108 396.0 312 68.9
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 3.5e-108 395.6 312 69.2
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 3.5e-108 395.6 312 67.6
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 3.5e-108 395.6 312 67.0
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 1.0e-107 394.0 312 67.6
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 1.8e-107 393.3 312 68.6
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 1.8e-107 393.3 310 68.1
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 2.3e-107 392.9 311 68.8
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 3.0e-107 392.5 311 68.5
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 3.0e-107 392.5 311 68.8
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 3.0e-107 392.5 312 68.6
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 3.0e-107 392.5 312 67.3
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 3.9e-107 392.1 312 67.6
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 5.1e-107 391.7 309 66.0
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 1.1e-106 390.6 311 68.5
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 1.5e-106 390.2 314 67.5
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 2.5e-106 389.4 310 68.1
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 5.7e-106 388.3 309 67.3
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 7.4e-106 387.9 312 68.3
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 7.4e-106 387.9 312 67.0
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 1.3e-105 387.1 309 68.0
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 1.3e-105 387.1 312 66.7
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 1.6e-105 386.7 330 63.9
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 2.2e-105 386.3 309 66.3
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 2.8e-105 386.0 309 66.7
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 3.7e-105 385.6 312 67.0
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 8.2e-105 384.4 312 66.3
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 1.1e-104 384.0 312 66.7
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.4e-104 383.6 309 67.6
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 4.1e-104 382.1 312 66.0
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 4.1e-104 382.1 308 65.6
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 2.0e-103 379.8 309 65.0
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 4.5e-103 378.6 312 66.3
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 1.0e-102 377.5 312 65.1
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 1.0e-102 377.5 308 66.2
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 2.9e-102 375.9 312 66.3
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 3.8e-102 375.6 312 64.7
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 5.0e-102 375.2 325 63.4
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 3.2e-101 372.5 312 64.1
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 1.2e-100 370.5 309 63.1
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 2.1e-100 369.8 311 64.3
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 2.7e-100 369.4 312 64.4
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 3.9e-99 365.5 312 63.5
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 3.3e-98 362.5 349 59.0
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 5.0e-94 348.6 268 69.0
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 1.9e-93 346.7 311 57.6
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 3.2e-93 345.9 250 73.6
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 4.7e-92 342.0 258 69.8
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 3.0e-91 339.3 299 59.9
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 8.8e-91 337.8 299 60.2
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 2.2e-89 333.2 297 60.3
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.8e-88 330.1 307 59.3
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 3.1e-88 329.3 307 59.9
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 4.5e-87 325.5 310 60.6
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 3.6e-84 315.8 351 52.4
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 2.0e-82 310.1 312 57.4
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 2.0e-79 300.1 308 53.2
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 1.9e-77 293.5 314 51.3
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 7.2e-77 291.6 208 72.1
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 6.1e-76 288.5 509 40.1
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 9.7e-74 281.2 187 75.9
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 4.8e-73 278.9 298 49.7
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 6.1e-68 261.9 209 68.9
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 8.8e-67 258.1 226 64.2
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 1.7e-62 243.8 255 58.8
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 7.0e-56 221.9 255 48.2
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 2.7e-55 219.9 312 42.6
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 2.7e-55 219.9 254 53.5
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 1.9e-45 187.2 165 64.8
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 8.3e-41 171.8 101 83.2
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 1.1e-37 161.4 284 36.3
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 3.7e-33 146.4 283 35.3
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 6.4e-33 145.6 206 46.6
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.0e-30 138.3 169 47.3
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 4.7e-28 129.4 107 63.6
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 1.1e-27 128.3 201 44.8
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 5.2e-27 125.9 82 75.6
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 7.3e-21 105.5 70 77.1
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 6.2e-20 102.4 87 67.8
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 1.4e-19 101.3 82 62.2
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 3.4e-18 96.7 82 65.9
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 1.7e-17 94.4 63 71.4
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 4.9e-17 92.8 124 41.1
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 2.7e-15 87.0 121 45.5
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 5.1e-14 82.8 111 43.2
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 4.0e-11 73.2 258 24.8
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 7.9e-07 58.9 54 57.4
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 1.3e-06 58.2 40 70.0


User provided reference genes

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