Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 2.0e-61 238.8 111 100.0
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 3.0e-57 224.9 111 94.6
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 1.4e-51 206.1 108 85.2
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 7.1e-51 203.8 108 85.2
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 9.2e-51 203.4 109 83.5
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 9.2e-51 203.4 109 83.5
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 1.2e-50 203.0 106 88.7
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 1.2e-50 203.0 106 88.7
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 2.7e-50 201.8 105 87.6
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 6.0e-50 200.7 105 84.8
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 1.0e-49 199.9 104 87.5
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 1.3e-49 199.5 106 85.8
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 1.7e-49 199.1 108 82.4
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 1.7e-49 199.1 108 82.4
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.3e-49 198.7 106 84.0
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 2.3e-49 198.7 108 84.3
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 3.0e-49 198.4 105 85.7
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 3.9e-49 198.0 105 87.6
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 3.9e-49 198.0 105 85.7
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 6.6e-49 197.2 105 85.7
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 8.7e-49 196.8 107 83.2
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 1.1e-48 196.4 104 85.6
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 1.5e-48 196.1 107 84.1
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 1.9e-48 195.7 104 85.6
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 1.9e-48 195.7 110 82.7
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 1.9e-48 195.7 108 83.3
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 3.3e-48 194.9 106 83.0
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 4.3e-48 194.5 106 83.0
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 5.6e-48 194.1 107 81.3
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 5.6e-48 194.1 105 84.8
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 7.3e-48 193.7 105 81.9
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 9.6e-48 193.4 104 85.6
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 9.6e-48 193.4 102 86.3
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.2e-47 193.0 105 83.8
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 1.2e-47 193.0 108 82.4
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 1.2e-47 193.0 104 84.6
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 1.2e-47 193.0 104 86.5
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 1.6e-47 192.6 105 82.9
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 1.6e-47 192.6 105 83.8
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 2.8e-47 191.8 105 82.9
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 3.6e-47 191.4 105 82.9
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 3.6e-47 191.4 106 81.1
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 4.7e-47 191.0 103 82.5
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 4.7e-47 191.0 105 83.8
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 4.7e-47 191.0 105 81.0
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 4.7e-47 191.0 108 80.6
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 8.1e-47 190.3 105 82.9
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 1.1e-46 189.9 108 81.5
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 1.1e-46 189.9 108 79.6
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 1.8e-46 189.1 105 83.8
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 1.8e-46 189.1 106 82.1
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 2.4e-46 188.7 104 81.7
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 2.4e-46 188.7 107 79.4
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 3.1e-46 188.3 104 81.7
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 3.1e-46 188.3 105 81.9
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 4.0e-46 188.0 105 81.0
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 4.0e-46 188.0 105 82.9
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 5.2e-46 187.6 105 81.0
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 5.2e-46 187.6 105 81.0
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 5.2e-46 187.6 105 81.0
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 5.2e-46 187.6 105 81.0
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 5.2e-46 187.6 105 81.0
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 9.0e-46 186.8 110 78.2
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 1.2e-45 186.4 105 81.9
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 1.2e-45 186.4 105 81.0
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 1.5e-45 186.0 105 78.1
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 2.0e-45 185.7 105 81.9
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.6e-45 185.3 108 78.7
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 3.4e-45 184.9 105 79.0
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 3.4e-45 184.9 105 80.0
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 3.4e-45 184.9 105 81.0
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 3.4e-45 184.9 105 80.0
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 4.4e-45 184.5 104 81.7
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 5.8e-45 184.1 104 78.8
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 7.6e-45 183.7 105 76.2
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 1.3e-44 183.0 101 80.2
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 1.3e-44 183.0 105 81.0
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 1.7e-44 182.6 105 79.0
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 2.2e-44 182.2 101 80.2
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.2e-44 182.2 104 80.8
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 2.2e-44 182.2 106 79.2
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 3.8e-44 181.4 104 78.8
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 3.8e-44 181.4 105 79.0
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 3.8e-44 181.4 104 77.9
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 6.4e-44 180.6 105 79.0
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 8.4e-44 180.3 104 76.0
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 8.4e-44 180.3 104 76.9
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 8.4e-44 180.3 104 79.8
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 1.1e-43 179.9 99 80.8
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.1e-43 179.9 104 79.8
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.1e-43 179.9 104 79.8
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 2.4e-43 178.7 99 79.8
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 2.4e-43 178.7 105 77.1
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 3.2e-43 178.3 98 80.6
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 4.2e-43 177.9 100 79.0
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 5.4e-43 177.6 98 80.6
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 5.4e-43 177.6 98 81.6
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 7.1e-43 177.2 99 77.8
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 9.3e-43 176.8 99 77.8
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 9.3e-43 176.8 104 77.9
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 9.3e-43 176.8 104 77.9
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 9.3e-43 176.8 100 81.0
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 2.1e-42 175.6 113 73.5
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 2.7e-42 175.3 88 88.6
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 3.5e-42 174.9 108 74.1
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 4.6e-42 174.5 99 77.8
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.0e-41 173.3 106 75.5
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 1.0e-41 173.3 100 79.0
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 1.0e-41 173.3 98 81.6
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 1.0e-41 173.3 107 74.8
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 3.0e-41 171.8 99 78.8
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 5.1e-41 171.0 104 75.0
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 5.1e-41 171.0 99 77.8
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 3.3e-40 168.3 97 79.4
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 1.3e-39 166.4 100 76.0
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 1.3e-39 166.4 100 76.0
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 1.3e-39 166.4 100 76.0
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 4.0e-38 161.4 105 70.5
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 1.7e-36 156.0 100 71.0
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 3.8e-36 154.8 107 69.2
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 1.4e-35 152.9 105 71.4
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.0e-33 146.7 105 65.7
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 3.7e-31 138.3 69 89.9
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 2.4e-30 135.6 68 88.2
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 5.8e-29 131.0 93 63.4
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 6.0e-26 120.9 99 53.5
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 1.0e-25 120.2 66 81.8
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 5.6e-24 114.4 100 52.0
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 2.6e-21 105.5 63 76.2
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 2.9e-20 102.1 67 68.7
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 8.4e-20 100.5 57 82.5
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 1.4e-19 99.8 99 50.5
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 4.3e-16 88.2 77 51.9
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 4.8e-15 84.7 53 64.2
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 4.1e-14 81.6 40 82.5
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 7.2e-11 70.9 43 76.7
FAN02G4440 Fragaria x ananassa HOM05D012050 ORTHO05D011158 4.1e-06 55.1 29 75.9


User provided reference genes

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