Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 3.3e-80 301.6 146 100.0
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.0e-24 116.3 108 57.4
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 5.3e-22 108.2 110 56.4
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.3e-17 92.8 73 64.4
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 3.3e-16 89.0 58 65.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.8e-15 85.9 102 48.0
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 4.8e-15 85.1 101 48.5
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.1e-14 84.0 77 53.2
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.1e-14 84.0 90 50.0
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.4e-14 83.6 88 50.0
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.8e-14 83.2 84 48.8
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 4.1e-14 82.0 80 51.2
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 4.1e-14 82.0 101 47.5
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 5.3e-14 81.6 108 47.2
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 5.3e-14 81.6 95 49.5
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 7.0e-14 81.3 113 46.0
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 9.1e-14 80.9 82 48.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 9.1e-14 80.9 86 52.3
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 9.1e-14 80.9 79 51.9
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 9.1e-14 80.9 105 45.7
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.2e-13 80.5 74 54.1
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.2e-13 80.5 86 52.3
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.2e-13 80.5 86 52.3
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 1.2e-13 80.5 54 63.0
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.6e-13 80.1 95 46.3
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.6e-13 80.1 96 44.8
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.6e-13 80.1 50 68.0
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 3.5e-13 79.0 51 64.7
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.5e-13 78.6 81 51.9
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 5.9e-13 78.2 81 50.6
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.0e-12 77.4 79 49.4
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.3e-12 77.0 110 44.5
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 1.7e-12 76.6 90 51.1
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.7e-12 76.6 74 52.7
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.2e-12 76.3 49 67.3
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.9e-12 75.9 50 64.0
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 2.9e-12 75.9 109 42.2
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 2.9e-12 75.9 93 46.2
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.9e-12 75.9 100 46.0
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 3.8e-12 75.5 51 66.7
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 5.0e-12 75.1 80 43.8
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-11 73.9 48 64.6
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.1e-11 73.9 68 51.5
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.1e-11 73.9 62 59.7
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.1e-11 73.9 50 64.0
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 1.5e-11 73.6 94 41.5
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 2.5e-11 72.8 51 64.7
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.2e-11 72.4 68 50.0
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 3.2e-11 72.4 107 44.9
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.2e-11 72.4 53 60.4
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 7.2e-11 71.2 73 52.1
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 7.2e-11 71.2 53 60.4
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.2e-10 70.5 80 47.5
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.6e-10 70.1 79 44.3
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.1e-10 69.7 69 49.3
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.1e-10 69.7 47 59.6
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 2.1e-10 69.7 47 59.6
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.1e-10 69.7 49 63.3
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 4.7e-10 68.6 77 44.2
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 6.1e-10 68.2 84 45.2
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 8.0e-10 67.8 46 65.2
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 8.0e-10 67.8 47 59.6
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 8.0e-10 67.8 52 55.8
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.0e-09 67.4 102 37.3
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 2.3e-09 66.2 47 59.6
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 3.0e-09 65.9 105 39.0
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.0e-09 65.9 46 56.5
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 3.0e-09 65.9 99 39.4
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 4.0e-09 65.5 49 55.1
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 4.0e-09 65.5 98 40.8
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 8.8e-09 64.3 98 40.8
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.5e-08 63.5 75 42.7
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.5e-08 63.5 50 56.0
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.5e-08 63.5 89 41.6
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 2.0e-08 63.2 87 37.9
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.3e-08 62.4 108 38.0
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.3e-08 62.4 53 49.1
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 7.5e-08 61.2 47 55.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 9.7e-08 60.8 51 51.0
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.3e-07 60.5 47 55.3
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.3e-07 60.5 62 50.0
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.3e-07 60.5 49 57.1
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 4.8e-07 58.5 70 44.3
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 4.8e-07 58.5 50 48.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 4.8e-07 58.5 85 42.4
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 6.3e-07 58.2 50 44.0
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 8.2e-07 57.8 50 44.0
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.4e-06 57.0 50 44.0
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 1.4e-06 57.0 50 44.0
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.4e-06 57.0 50 44.0
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.4e-06 57.0 83 39.8
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.8e-06 56.6 50 46.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 2.4e-06 56.2 50 44.0
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.4e-06 56.2 61 39.3
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 3.1e-06 55.8 46 50.0


User provided reference genes

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