Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 5.1e-29 130.6 75 100.0
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 2.1e-14 82.0 76 72.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.1e-14 82.0 75 62.7
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.8e-13 79.0 75 62.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 2.0e-12 75.5 81 54.3
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.6e-12 75.1 75 60.0
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 4.4e-12 74.3 76 59.2
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 6.3e-11 70.5 80 52.5
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 8.3e-11 70.1 75 54.7
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 1.1e-10 69.7 75 56.0
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 1.4e-10 69.3 82 54.9
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 1.8e-10 68.9 77 54.5
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 1.8e-10 68.9 77 54.5
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.4e-10 68.6 82 52.4
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 2.4e-10 68.6 80 61.2
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 5.3e-10 67.4 83 54.2
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 7.0e-10 67.0 80 48.8
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 7.0e-10 67.0 87 52.9
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 9.1e-10 66.6 75 58.7
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.2e-09 66.2 82 51.2
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.6e-09 65.9 78 55.1
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 2.0e-09 65.5 75 54.7
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.5e-09 64.3 83 57.8
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 7.7e-09 63.5 75 53.3
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.0e-08 63.2 75 54.7
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 1.0e-08 63.2 79 58.2
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 1.0e-08 63.2 75 53.3
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.0e-08 63.2 81 49.4
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.3e-08 62.8 79 51.9
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 1.7e-08 62.4 83 57.8
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.7e-08 62.4 75 57.3
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 2.2e-08 62.0 75 54.7
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 2.2e-08 62.0 79 49.4
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 2.2e-08 62.0 85 52.9
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.2e-08 62.0 82 52.4
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 2.9e-08 61.6 75 45.3
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 5.0e-08 60.8 78 50.0
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 6.5e-08 60.5 76 52.6
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 6.5e-08 60.5 75 52.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 6.5e-08 60.5 80 51.2
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.1e-07 59.7 77 51.9
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 1.5e-07 59.3 79 54.4
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.5e-07 59.3 75 54.7
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.5e-07 59.3 85 44.7
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 1.5e-07 59.3 77 57.1
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 2.5e-07 58.5 75 54.7
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.5e-07 58.5 75 53.3
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 2.5e-07 58.5 75 53.3
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 2.5e-07 58.5 78 56.4
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 2.5e-07 58.5 89 53.9
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 3.2e-07 58.2 79 45.6
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 4.2e-07 57.8 75 54.7
HanXRQChr06g0171331 Helianthus annuus HOM05D005953 ORTHO05D004056 4.2e-07 57.8 76 46.1
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 4.2e-07 57.8 85 52.9
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 5.5e-07 57.4 83 54.2
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 5.5e-07 57.4 75 53.3
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 7.2e-07 57.0 77 45.5
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.2e-06 56.2 80 50.0
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 1.2e-06 56.2 76 51.3
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 1.6e-06 55.8 75 52.0
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 2.1e-06 55.5 80 42.5
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 2.1e-06 55.5 78 57.7
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.1e-06 55.5 85 44.7
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 2.1e-06 55.5 87 49.4
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.1e-06 55.5 52 55.8
HPP92_014633 Vanilla planifolia HOM05D005953 ORTHO05D004056 2.1e-06 55.5 75 44.0
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.7e-06 55.1 78 53.8
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 2.7e-06 55.1 73 46.6
DCAR_009746 Daucus carota HOM05D005953 ORTHO05D004056 2.7e-06 55.1 76 44.7
PSO675G7471 Papaver somniferum HOM05D005953 ORTHO05D004056 2.7e-06 55.1 53 52.8
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 2.7e-06 55.1 90 45.6
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 3.6e-06 54.7 73 50.7
Cpa.g.sc34.158 Carica papaya HOM05D005953 ORTHO05D043536 4.7e-06 54.3 77 54.5
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 4.7e-06 54.3 75 48.0
Cc05_g07120 Coffea canephora HOM05D005953 ORTHO05D004056 4.7e-06 54.3 78 55.1
HanXRQChr17g0556381 Helianthus annuus HOM05D005953 ORTHO05D004056 4.7e-06 54.3 75 45.3
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 4.7e-06 54.3 75 44.0
Potri.013G131900 Populus trichocarpa HOM05D005953 ORTHO05D004056 6.1e-06 53.9 75 54.7
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 6.1e-06 53.9 75 52.0
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 8.0e-06 53.5 78 43.6
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 8.0e-06 53.5 78 51.3
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 8.0e-06 53.5 75 50.7


User provided reference genes

Program Settings