Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045801.1 Olea europaea HOM05D005127 ORTHO05D006022 1.3e-171 606.3 295 100.0
Oeu012525.1 Olea europaea HOM05D005127 ORTHO05D006022 2.9e-83 312.8 357 47.6
SGA_v2.0_scaffold135G34932 Striga asiatica HOM05D005127 ORTHO05D006022 2.4e-82 309.7 347 49.3
Oeu039702.1 Olea europaea HOM05D005127 ORTHO05D006022 1.9e-79 300.1 359 45.7
SalBow3G1912 Salvia bowleyana HOM05D005127 ORTHO05D006022 9.6e-79 297.7 323 49.2
SalBow3G2114 Salvia bowleyana HOM05D005127 ORTHO05D006022 9.6e-79 297.7 323 49.2
MSTRG.15431 Avicennia marina HOM05D005127 ORTHO05D006022 4.7e-78 295.4 346 47.1
CSS0034699 Camellia sinensis var. sinensis HOM05D005127 ORTHO05D006022 1.7e-75 287.0 335 48.1
CiPaw.03G076300 Carya illinoinensis HOM05D005127 ORTHO05D006022 1.7e-75 287.0 337 46.9
Haze_14318 Corylus avellana HOM05D005127 ORTHO05D006022 1.7e-75 287.0 327 47.1
Cfa007754 Carpinus fangiana HOM05D005127 ORTHO05D006022 2.9e-75 286.2 327 47.4
Atru.chr1.2154 Acer truncatum HOM05D005127 ORTHO05D006022 2.7e-73 279.6 336 45.2
Migut.H02248 Erythranthe guttata HOM05D005127 ORTHO05D006022 4.6e-73 278.9 340 46.5
TAR371G0217 Trochodendron aralioides HOM05D005127 ORTHO05D006022 1.3e-72 277.3 341 46.3
Ciclev10012019m.g Citrus clementina HOM05D005127 ORTHO05D006022 2.3e-72 276.6 344 46.2
Potri.017G139800 Populus trichocarpa HOM05D005127 ORTHO05D006022 3.0e-72 276.2 343 45.5
Rhsim08G0021200 Rhododendron simsii HOM05D005127 ORTHO05D006022 3.9e-72 275.8 345 45.8
Glyma.14G210400 Glycine max HOM05D005127 ORTHO05D006022 1.1e-71 274.2 348 45.1
Sopen03g005720 Solanum pennellii HOM05D005127 ORTHO05D006022 1.5e-71 273.9 338 43.5
CAN.G404.4 Capsicum annuum HOM05D005127 ORTHO05D006022 1.9e-71 273.5 339 44.2
Hma1.2p1_0158F.1_g069660 Hydrangea macrophylla HOM05D005127 ORTHO05D006022 1.9e-71 273.5 342 44.4
Solyc03g031850.1 Solanum lycopersicum HOM05D005127 ORTHO05D006022 2.5e-71 273.1 338 43.5
Glyma.02G240800 Glycine max HOM05D005127 ORTHO05D006022 3.3e-71 272.7 352 44.9
CANSAT21G1480 Cannabis sativa HOM05D005127 ORTHO05D006022 4.3e-71 272.3 336 45.2
Peaxi162Scf00521g00053 Petunia axillaris HOM05D005127 ORTHO05D006022 4.3e-71 272.3 337 44.2
Cc07_g12800 Coffea canephora HOM05D005127 ORTHO05D006022 7.3e-71 271.6 342 45.6
Nitab4.5_0004645g0030 Nicotiana tabacum HOM05D005127 ORTHO05D006022 1.6e-70 270.4 350 42.6
QL02p064340 Quercus lobata HOM05D005127 ORTHO05D006022 1.6e-70 270.4 334 44.9
Nitab4.5_0000091g0380 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.1e-70 270.0 350 42.9
VMungo0647G1176 Vigna mungo HOM05D005127 ORTHO05D006022 2.1e-70 270.0 342 45.3
ClCG05G011360 Citrullus lanatus HOM05D005127 ORTHO05D006022 2.8e-70 269.6 342 45.0
Dinv19078 Davidia involucrata HOM05D005127 ORTHO05D006022 2.8e-70 269.6 305 49.5
Phvul.008G240900 Phaseolus vulgaris HOM05D005127 ORTHO05D006022 2.8e-70 269.6 342 45.0
PGSC0003DMG400042292 Solanum tuberosum HOM05D005127 ORTHO05D006022 3.6e-70 269.2 342 43.3
Sed0023234 Sechium edule HOM05D005127 ORTHO05D006022 4.8e-70 268.9 342 44.7
Sabra17G0118000 Salix brachista HOM05D005127 ORTHO05D006022 6.2e-70 268.5 343 44.3
PSO724G0684 Papaver somniferum HOM05D005127 ORTHO05D006022 1.4e-69 267.3 347 43.2
Thecc.04G065100 Theobroma cacao HOM05D005127 ORTHO05D006022 1.4e-69 267.3 342 44.7
PGR042G2448 Punica granatum HOM05D005127 ORTHO05D006022 1.8e-69 266.9 349 43.8
TWI74G1018 Tripterygium wilfordii HOM05D005127 ORTHO05D006022 3.1e-69 266.2 346 43.9
Sabra04G0053400 Salix brachista HOM05D005127 ORTHO05D006022 6.9e-69 265.0 346 43.6
PSO729G0281 Papaver somniferum HOM05D005127 ORTHO05D006022 9.0e-69 264.6 347 43.2
PGSC0003DMG400016729 Solanum tuberosum HOM05D005127 ORTHO05D006022 1.2e-68 264.2 345 42.0
BcaC05g30317 Brassica carinata HOM05D005127 ORTHO05D006022 1.5e-68 263.8 329 42.9
Potri.004G080600 Populus trichocarpa HOM05D005127 ORTHO05D006022 1.5e-68 263.8 346 43.6
RcHm_v2.0_Chr3g0488741 Rosa chinensis HOM05D005127 ORTHO05D006022 2.0e-68 263.5 336 44.0
COL.COLO4_19768 Corchorus olitorius HOM05D005127 ORTHO05D006022 3.4e-68 262.7 349 42.7
Manes.10G079000 Manihot esculenta HOM05D005127 ORTHO05D006022 3.4e-68 262.7 351 43.0
Carub.0003s0236 Capsella rubella HOM05D005127 ORTHO05D006022 1.3e-67 260.8 345 42.6
Sp3g02250 Schrenkiella parvula HOM05D005127 ORTHO05D006022 2.2e-67 260.0 344 42.2
GSVIVG01035235001 Vitis vinifera HOM05D005127 ORTHO05D006022 2.9e-67 259.6 303 47.5
Prupe.3G014700 Prunus persica HOM05D005127 ORTHO05D006022 4.9e-67 258.8 347 43.2
Aqoxy3G04119 Aquilegia oxysepala HOM05D005127 ORTHO05D006022 8.4e-67 258.1 339 41.9
Gorai.002G111000 Gossypium raimondii HOM05D005127 ORTHO05D006022 8.4e-67 258.1 339 43.1
Sopen02g025870 Solanum pennellii HOM05D005127 ORTHO05D006022 1.1e-66 257.7 351 42.7
Aa31LG5G13690 Aethionema arabicum HOM05D005127 ORTHO05D006022 1.4e-66 257.3 349 40.7
Thhalv10020974m.g Eutrema salsugineum HOM05D005127 ORTHO05D006022 1.4e-66 257.3 345 41.4
FAN26G1075 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.4e-66 257.3 334 43.7
AT3G03210 Arabidopsis thaliana HOM05D005127 ORTHO05D006022 1.9e-66 256.9 345 42.0
FvH4_1g27360 Fragaria vesca HOM05D005127 ORTHO05D006022 1.9e-66 256.9 337 43.6
Cpa.g.sc178.24 Carica papaya HOM05D005127 ORTHO05D006022 2.4e-66 256.5 346 42.5
AUR62037482 Chenopodium quinoa HOM05D005127 ORTHO05D009825 2.4e-66 256.5 326 45.4
Duzib138G1903 Durio zibethinus HOM05D005127 ORTHO05D006022 2.4e-66 256.5 347 43.5
Sc09g0004500 Simmondsia chinensis HOM05D005127 ORTHO05D006022 2.4e-66 256.5 337 44.5
C05p63600 Brassica napus HOM05D005127 ORTHO05D006022 3.2e-66 256.1 341 41.1
BolC5t35029H Brassica oleracea HOM05D005127 ORTHO05D006022 3.2e-66 256.1 341 41.1
Lalb_Chr10g0104061 Lupinus albus HOM05D005127 ORTHO05D006022 3.2e-66 256.1 346 41.3
Psat2g042880 Pisum sativum HOM05D005127 ORTHO05D006022 3.2e-66 256.1 350 41.1
BcaC05g30528 Brassica carinata HOM05D005127 ORTHO05D006022 4.2e-66 255.8 341 41.1
FAN19G2113 Fragaria x ananassa HOM05D005127 ORTHO05D006022 4.2e-66 255.8 337 43.3
FAN23G3138 Fragaria x ananassa HOM05D005127 ORTHO05D006022 4.2e-66 255.8 337 43.6
CAN.G1681.7 Capsicum annuum HOM05D005127 ORTHO05D006022 5.4e-66 255.4 334 43.7
A05p43980 Brassica napus HOM05D005127 ORTHO05D006022 7.1e-66 255.0 342 40.9
CARHR077230 Cardamine hirsuta HOM05D005127 ORTHO05D006022 7.1e-66 255.0 344 41.6
Gohir.D01G085400 Gossypium hirsutum HOM05D005127 ORTHO05D006022 7.1e-66 255.0 339 42.5
Eucgr.H04888 Eucalyptus grandis HOM05D005127 ORTHO05D006022 9.3e-66 254.6 355 42.5
Gohir.A01G100900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 9.3e-66 254.6 339 42.8
Lalb_Chr17g0345881 Lupinus albus HOM05D005127 ORTHO05D006022 9.3e-66 254.6 348 42.2
LjContig00141g0000865 Lotus japonicus HOM05D005127 ORTHO05D006022 1.2e-65 254.2 313 46.0
MD09G1279600 Malus domestica HOM05D005127 ORTHO05D006022 1.2e-65 254.2 347 42.9
Actinidia35707 Actinidia chinensis HOM05D005127 ORTHO05D006022 1.6e-65 253.8 327 45.6
FAN28G1653 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.6e-65 253.8 337 43.3
FAN28G2393 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.6e-65 253.8 337 43.3
Nitab4.5_0007410g0020 Nicotiana tabacum HOM05D005127 ORTHO05D006022 6.0e-65 251.9 342 43.0
AL3G12820 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 7.9e-65 251.5 345 41.7
Ca_05761_v3 Cicer arietinum L. HOM05D005127 ORTHO05D006022 7.9e-65 251.5 354 41.2
Lj4P252T15 Lonicera japonica HOM05D005127 ORTHO05D006022 7.9e-65 251.5 336 41.4
Nitab4.5_0010422g0010 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.3e-64 250.0 344 41.6
BraSC90t46712Z Brassica rapa HOM05D005127 ORTHO05D006022 3.9e-64 249.2 345 39.7
Medtr5g076930 Medicago truncatula HOM05D005127 ORTHO05D006022 6.7e-64 248.4 348 41.4
CsaV3_3G021100 Cucumis sativus L. HOM05D005127 ORTHO05D006022 8.7e-64 248.1 260 50.4
Gohir.D07G078700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.1e-63 247.7 349 41.5
Gorai.001G083200 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.1e-63 247.7 349 41.5
Gohir.A07G074000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.5e-63 247.3 349 41.5
MBI06_g13889_MAGBIO Magnolia biondii HOM05D005127 ORTHO05D006022 1.5e-63 247.3 342 42.1
TPR.G5353 Trifolium pratense HOM05D005127 ORTHO05D006022 1.9e-63 246.9 360 40.3
DCAR_003746 Daucus carota HOM05D005127 ORTHO05D006022 3.3e-63 246.1 349 40.4
Lsat_1_v5_gn_2_71721 Lactuca sativa HOM05D005127 ORTHO05D006022 5.6e-63 245.4 315 43.2
HanXRQChr14g0443471 Helianthus annuus HOM05D005127 ORTHO05D006022 7.4e-63 245.0 329 42.9
MELO3C020241.2 Cucumis melo HOM05D005127 ORTHO05D006022 2.8e-62 243.0 260 49.2
THA.LOC104827223 Tarenaya hassleriana HOM05D005127 ORTHO05D006022 2.4e-61 240.0 344 41.3
Gohir.A11G169700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.1e-61 239.6 338 39.6
ATR0807G162 Amborella trichopoda HOM05D005127 ORTHO05D006022 1.2e-60 237.7 340 40.6
Gorai.007G188500 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.5e-60 237.3 338 39.6
Gohir.D11G175900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 6.7e-56 221.9 322 40.7
Migut.H02247 Erythranthe guttata HOM05D005127 ORTHO05D006022 1.1e-55 221.1 326 40.2
ECA238G3642 Erigeron canadensis HOM05D005127 ORTHO05D006022 2.8e-54 216.5 260 44.2
CDE01G0221 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 8.2e-54 214.9 265 42.6
SHI30090 Sapria himalayana HOM05D005127 ORTHO05D006022 2.6e-52 209.9 259 42.9
Zm00001eb393730 Zea mays HOM05D005127 ORTHO05D006022 1.2e-49 201.1 335 34.6
SEGI_34462 Sequoiadendron giganteum HOM05D005127 ORTHO05D006022 4.6e-49 199.1 259 40.2
Os10g0539400 Oryza sativa ssp. japonica HOM05D005127 ORTHO05D006022 5.1e-48 195.7 329 34.7
Zm00001eb022160 Zea mays HOM05D005127 ORTHO05D006022 1.6e-46 190.7 329 34.3
SMO141G0134 Selaginella moellendorffii HOM05D005127 ORTHO05D006022 3.1e-45 186.4 334 34.1
Mapoly0003s0310 Marchantia polymorpha HOM05D005127 ORTHO05D006022 1.2e-44 184.5 359 32.0
AUR62004769 Chenopodium quinoa HOM05D005127 ORTHO05D006022 1.1e-42 177.9 184 47.8
Pp3c8_14800 Physcomitrium patens HOM05D005127 ORTHO05D006022 2.3e-40 170.2 348 31.0
AagrBONN_evm.TU.Sc2ySwM_228.805 Anthoceros agrestis HOM05D005127 ORTHO05D006022 1.8e-37 160.6 243 35.0
HPP92_020636 Vanilla planifolia HOM05D005127 ORTHO05D006022 1.8e-37 160.6 186 39.8
Solyc02g081230.4 Solanum lycopersicum HOM05D005127 ORTHO05D006022 2.0e-36 157.1 184 45.7
AagrBONN_evm.TU.Sc2ySwM_117.2318 Anthoceros agrestis HOM05D005127 ORTHO05D006022 1.9e-34 150.6 242 37.6
CDE02G3442 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 5.5e-34 149.1 338 30.2
unitig_699.g19573 Utricularia gibba HOM05D005127 ORTHO05D006022 2.3e-32 143.7 197 42.1
Gorai.009G350000 Gossypium raimondii HOM05D000154 ORTHO05D006022 9.4e-26 121.7 126 48.4
Gorai.004G162300 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.6e-25 120.9 126 48.4
CBR_g39794 Chara braunii HOM05D005127 ORTHO05D006022 1.0e-24 118.2 291 28.2
Lsat_1_v5_gn_2_6720 Lactuca sativa HOM05D005127 ORTHO05D006022 8.2e-22 108.6 150 40.0
Lsat_1_v5_gn_5_127001 Lactuca sativa HOM05D005127 ORTHO05D006022 2.0e-20 104.0 135 42.2
Gorai.005G117100 Gossypium raimondii HOM05D005127 ORTHO05D006022 4.5e-20 102.8 126 44.4
Gohir.D08G156000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.0e-16 90.1 82 51.2
Gorai.011G105200 Gossypium raimondii HOM05D000154 ORTHO05D006022 3.0e-16 90.1 82 51.2
Gohir.D05G325801 Gossypium hirsutum HOM05D000154 ORTHO05D006022 4.0e-16 89.7 82 51.2
Medtr5g076940 Medicago truncatula HOM05D005127 ORTHO05D006022 2.0e-15 87.4 97 44.3
PSO063G7663 Papaver somniferum HOM05D005127 ORTHO05D006022 5.7e-15 85.9 151 36.4
Gorai.002G056700 Gossypium raimondii HOM05D005127 ORTHO05D006022 9.7e-15 85.1 82 50.0
RcHm_v2.0_Chr5g0042551 Rosa chinensis HOM05D005127 ORTHO05D006022 1.4e-13 81.3 109 39.4
MCO15G483 Micromonas commoda HOM05D005127 ORTHO05D006022 4.1e-13 79.7 283 21.6
Gohir.D04G098033 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.5e-12 76.6 87 46.0
Gohir.D02G103100 Gossypium hirsutum HOM05D000154 ORTHO05D006022 1.5e-10 71.2 63 52.4
RcHm_v2.0_Chr5g0027411 Rosa chinensis HOM05D005127 ORTHO05D006022 9.8e-07 58.5 188 29.8


User provided reference genes

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