Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.6e-172 608.6 301 100.0
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.1e-126 456.1 337 68.2
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.4e-125 453.4 337 68.2
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.8e-124 448.0 334 68.9
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.2e-122 441.8 319 70.8
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-121 439.9 319 70.8
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.7e-121 439.1 319 70.5
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.0e-120 437.2 328 68.3
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.0e-120 435.6 319 70.5
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 5.1e-120 434.9 330 67.9
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 5.7e-119 431.4 323 68.1
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 4.8e-118 428.3 320 68.4
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.1e-117 427.2 316 69.6
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 1.8e-117 426.4 330 66.7
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 2.4e-117 426.0 332 66.6
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 3.1e-117 425.6 333 66.1
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 4.1e-117 425.2 322 68.6
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 6.9e-117 424.5 323 68.7
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.2e-116 423.7 321 68.8
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 2.9e-115 419.1 330 66.4
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 3.8e-115 418.7 330 66.4
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 5.0e-115 418.3 330 66.1
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 1.6e-113 413.3 334 64.7
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 6.1e-113 411.4 320 66.6
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 1.4e-112 410.2 329 63.8
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.8e-112 409.8 330 64.8
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.9e-112 408.7 323 64.7
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.5e-111 406.8 322 64.3
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.3e-111 405.6 322 64.3
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 7.4e-111 404.4 313 66.8
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 1.3e-110 403.7 347 61.4
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.8e-110 402.5 320 65.0
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 8.2e-110 401.0 332 64.5
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 2.4e-109 399.4 324 63.0
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.7e-107 393.3 318 65.1
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.5e-107 391.3 316 66.5
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 6.5e-107 391.3 329 60.2
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 8.5e-107 391.0 338 61.5
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 1.9e-106 389.8 288 71.2
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.5e-106 389.4 327 61.8
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 6.7e-104 381.3 335 59.7
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 6.7e-104 381.3 305 64.9
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 2.2e-102 376.3 319 60.2
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 4.8e-102 375.2 331 60.1
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.1e-101 374.0 308 63.3
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.1e-101 374.0 327 61.5
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 1.1e-101 374.0 332 59.9
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.4e-101 373.6 317 62.8
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 3.1e-101 372.5 343 59.2
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 4.1e-101 372.1 327 59.3
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 2.0e-100 369.8 306 63.4
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.0e-100 369.8 305 63.0
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 2.6e-100 369.4 331 59.5
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.4e-100 369.0 314 61.8
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 4.5e-100 368.6 296 64.2
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 4.5e-100 368.6 332 58.4
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.9e-99 365.9 318 61.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.8e-99 365.5 291 64.9
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 3.2e-98 362.5 330 58.5
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 3.2e-98 362.5 291 64.3
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 1.2e-97 360.5 323 59.1
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 2.1e-97 359.8 330 58.5
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.5e-95 353.6 375 53.3
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 2.0e-95 353.2 341 56.6
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 3.3e-95 352.4 329 57.1
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 9.7e-95 350.9 266 65.8
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.3e-94 350.5 336 57.1
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.2e-94 349.7 299 62.9
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.2e-94 349.7 272 65.8
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.7e-94 349.0 291 63.6
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.4e-93 347.1 323 59.4
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 7.7e-92 341.3 290 62.1
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.0e-91 340.9 359 52.6
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.9e-91 339.3 308 60.7
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 5.5e-90 335.1 269 62.8
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 5.3e-85 318.5 230 69.6
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 5.9e-84 315.1 216 73.1
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 8.5e-83 311.2 302 57.0
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.4e-79 299.3 216 70.8
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-78 297.4 267 61.4
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 3.7e-78 295.8 282 56.7
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-76 290.0 298 54.4
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 6.6e-75 285.0 331 51.1
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 3.6e-73 279.3 313 52.7
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 3.6e-73 279.3 298 52.3
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 1.0e-72 277.7 220 65.9
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-72 277.3 319 52.4
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.2e-72 275.4 195 69.7
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-71 273.5 219 66.7
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.7e-70 269.2 319 50.5
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-69 266.2 319 51.4
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-63 247.3 180 68.9
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 5.8e-63 245.4 184 69.6
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 1.0e-59 234.6 275 48.4
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 1.8e-56 223.8 368 37.0
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.2e-55 221.1 260 46.2
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.5e-52 209.5 171 63.7
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 1.9e-50 203.8 126 75.4
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.5e-50 203.4 177 57.1
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.1e-42 177.9 259 40.2
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 3.3e-42 176.4 164 57.3
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 5.4e-37 159.1 282 37.2
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 2.1e-36 157.1 126 63.5
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.9e-21 107.5 242 32.2
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 1.1e-18 98.2 97 54.6
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 3.3e-18 96.7 89 55.1
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 2.8e-17 93.6 68 67.6
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 4.8e-17 92.8 75 64.0
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 8.7e-11 72.0 176 30.1
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.0e-07 60.8 63 54.0


User provided reference genes

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