Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 1.5e-95 352.8 179 100.0
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 3.2e-77 292.0 179 80.4
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 7.1e-77 290.8 179 81.0
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 3.0e-75 285.4 179 79.9
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 3.0e-75 285.4 179 81.0
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 7.3e-74 280.8 179 82.1
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 9.6e-74 280.4 179 79.3
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 2.1e-73 279.3 179 78.8
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 6.2e-73 277.7 170 81.8
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 6.2e-73 277.7 179 76.5
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 8.1e-73 277.3 179 76.5
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 8.1e-73 277.3 169 82.8
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 1.4e-72 276.6 179 78.2
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.4e-72 275.8 179 78.2
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 2.4e-72 275.8 180 78.9
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 2.4e-72 275.8 182 75.8
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 4.0e-72 275.0 177 79.7
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 5.3e-72 274.6 179 76.5
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 6.9e-72 274.2 179 77.7
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 9.0e-72 273.9 179 75.4
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 9.0e-72 273.9 179 76.5
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 1.2e-71 273.5 177 77.4
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.2e-71 273.5 179 78.8
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 1.5e-71 273.1 179 75.4
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 2.6e-71 272.3 179 75.4
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 4.5e-71 271.6 175 79.4
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.3e-70 270.0 179 75.4
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 1.7e-70 269.6 179 75.4
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.7e-70 269.6 179 76.5
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.7e-70 269.6 179 76.5
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 2.2e-70 269.2 178 74.7
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 2.2e-70 269.2 178 75.8
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 2.9e-70 268.9 175 78.9
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 3.8e-70 268.5 178 74.2
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 8.4e-70 267.3 170 77.1
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 8.4e-70 267.3 179 74.9
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.4e-69 266.5 179 74.3
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 2.4e-69 265.8 179 74.9
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 2.4e-69 265.8 179 73.2
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 3.2e-69 265.4 175 77.1
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 3.2e-69 265.4 179 74.3
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 3.2e-69 265.4 169 79.9
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 7.1e-69 264.2 179 74.9
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 9.3e-69 263.8 179 74.3
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 9.3e-69 263.8 178 74.2
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 9.3e-69 263.8 178 73.0
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 9.3e-69 263.8 179 73.7
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.2e-68 263.5 179 73.2
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 1.6e-68 263.1 179 76.5
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 1.6e-68 263.1 180 73.9
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 1.6e-68 263.1 178 73.0
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 2.1e-68 262.7 178 73.0
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 2.7e-68 262.3 172 77.3
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 3.5e-68 261.9 179 72.1
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 4.6e-68 261.5 173 75.7
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 4.6e-68 261.5 179 72.6
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 1.0e-67 260.4 179 74.3
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 1.0e-67 260.4 170 77.6
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.0e-67 260.4 175 77.1
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 1.8e-67 259.6 170 77.6
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 2.3e-67 259.2 179 72.1
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 2.3e-67 259.2 179 73.7
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 3.9e-67 258.5 179 73.7
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 3.9e-67 258.5 179 72.1
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 3.9e-67 258.5 179 72.1
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 5.1e-67 258.1 179 72.6
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 6.7e-67 257.7 169 75.7
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 6.7e-67 257.7 171 75.4
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 8.7e-67 257.3 179 72.6
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.1e-66 256.9 179 72.6
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.1e-66 256.9 179 72.6
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 1.5e-66 256.5 179 72.6
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 2.5e-66 255.8 179 72.1
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 3.3e-66 255.4 179 72.6
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 3.3e-66 255.4 177 72.9
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 4.3e-66 255.0 179 70.9
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 5.6e-66 254.6 175 73.7
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 7.4e-66 254.2 179 72.1
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 9.6e-66 253.8 171 74.3
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 1.3e-65 253.4 171 73.1
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 1.3e-65 253.4 179 70.9
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 1.3e-65 253.4 169 75.1
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.1e-65 252.7 173 73.4
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 2.8e-65 252.3 170 74.1
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.8e-65 252.3 178 71.3
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.8e-65 252.3 179 71.5
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.8e-65 252.3 179 70.9
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 2.8e-65 252.3 170 74.7
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 3.7e-65 251.9 179 70.4
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 4.8e-65 251.5 171 73.7
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 4.8e-65 251.5 168 76.2
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 6.2e-65 251.1 168 76.2
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 8.1e-65 250.8 177 74.0
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 1.1e-64 250.4 175 72.6
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 2.4e-64 249.2 175 71.4
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 3.1e-64 248.8 179 71.5
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 3.1e-64 248.8 179 69.3
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 4.0e-64 248.4 175 71.4
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 5.3e-64 248.1 175 70.9
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 5.3e-64 248.1 202 66.3
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 5.3e-64 248.1 173 72.8
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 6.9e-64 247.7 175 71.4
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 6.9e-64 247.7 175 71.4
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 9.0e-64 247.3 186 69.4
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 1.2e-63 246.9 171 73.1
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 3.4e-63 245.4 171 71.9
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 3.4e-63 245.4 165 73.9
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 5.8e-63 244.6 176 68.2
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 7.6e-63 244.2 172 74.4
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 6.5e-62 241.1 175 68.6
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 8.4e-62 240.7 157 77.7
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 1.9e-61 239.6 175 71.4
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 4.2e-61 238.4 179 66.5
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 5.5e-61 238.0 171 69.0
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 5.5e-61 238.0 171 69.6
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 7.1e-61 237.7 216 61.1
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 9.3e-61 237.3 175 69.7
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.2e-60 236.9 160 74.4
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 7.9e-60 234.2 171 69.0
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 1.1e-58 230.3 172 69.8
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 1.5e-58 229.9 176 69.3
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.5e-58 229.9 201 63.2
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 1.3e-57 226.9 147 77.6
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 2.1e-57 226.1 176 65.3
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 2.4e-56 222.6 150 75.3
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 6.9e-56 221.1 150 74.7
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 6.5e-54 214.5 171 65.5
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 5.0e-46 188.3 120 81.7
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 1.0e-43 180.6 162 54.9
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 1.4e-43 180.3 169 60.9
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 8.8e-43 177.6 169 52.1
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 4.3e-42 175.3 170 59.4
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 1.3e-41 173.7 162 53.1
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 1.1e-40 170.6 117 76.9
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 1.8e-40 169.9 115 73.9
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 2.4e-40 169.5 165 51.5
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 1.2e-39 167.2 114 76.3
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 4.5e-39 165.2 165 50.3
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 1.1e-37 160.6 104 77.9
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 3.6e-36 155.6 174 52.3
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.6e-36 155.6 160 56.2
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 1.8e-35 153.3 166 50.6
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 2.8e-33 146.0 185 50.3
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 1.1e-32 144.1 158 48.7
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 1.4e-32 143.7 221 41.2
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 4.5e-31 138.7 86 80.2
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 6.5e-30 134.8 93 71.0
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 5.5e-29 131.7 83 78.3
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 7.2e-29 131.3 82 78.0
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 3.6e-28 129.0 98 71.4
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 6.1e-28 128.3 89 71.9
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 2.6e-26 122.9 138 50.7
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 7.4e-26 121.3 85 69.4
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 3.5e-23 112.5 107 59.8
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 1.3e-22 110.5 97 58.8
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 1.5e-21 107.1 75 69.3
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 1.6e-20 103.6 82 61.0
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 8.8e-19 97.8 138 47.8
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 9.1e-16 87.8 76 56.6
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 3.2e-13 79.3 58 60.3
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 1.2e-12 77.4 175 36.0
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 6.8e-11 71.6 42 73.8
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 5.7e-10 68.6 42 66.7
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 9.8e-10 67.8 103 41.7
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 1.3e-09 67.4 160 31.9


User provided reference genes

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