Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 2.5e-86 322.0 154 100.0
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 3.8e-79 298.1 144 98.6
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 8.0e-69 263.8 144 84.7
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 2.3e-68 262.3 144 83.3
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.0e-67 259.2 144 82.6
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 2.0e-67 259.2 144 84.0
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 2.6e-67 258.8 144 83.3
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 3.4e-67 258.5 144 82.6
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 1.3e-66 256.5 144 83.3
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 1.3e-66 256.5 145 82.1
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 1.3e-66 256.5 144 83.3
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 3.7e-66 255.0 144 81.2
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 4.9e-66 254.6 144 81.9
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 4.9e-66 254.6 144 81.9
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.1e-65 253.4 144 81.2
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 2.4e-65 252.3 144 82.6
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.4e-65 252.3 144 80.6
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 4.1e-65 251.5 144 79.2
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 4.1e-65 251.5 144 79.9
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 5.4e-65 251.1 145 82.1
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 5.4e-65 251.1 144 80.6
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 9.1e-65 250.4 144 80.6
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 9.1e-65 250.4 144 80.6
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 1.2e-64 250.0 144 79.2
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 1.6e-64 249.6 144 80.6
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 2.0e-64 249.2 144 79.9
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 2.7e-64 248.8 144 78.5
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 5.9e-64 247.7 144 79.2
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 3.8e-63 245.0 144 81.2
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 8.6e-63 243.8 144 78.5
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 9.5e-62 240.4 145 75.9
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 9.5e-62 240.4 145 75.9
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 9.5e-62 240.4 144 75.7
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.2e-61 240.0 144 78.5
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 1.2e-61 240.0 145 77.2
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 2.1e-61 239.2 144 76.4
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 3.6e-61 238.4 144 75.7
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 4.7e-61 238.0 144 76.4
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 4.7e-61 238.0 144 73.6
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 6.1e-61 237.7 144 73.6
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 6.1e-61 237.7 145 77.2
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 8.0e-61 237.3 144 76.4
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 8.0e-61 237.3 144 76.4
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.8e-60 236.1 144 74.3
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 4.0e-60 235.0 149 74.5
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 5.2e-60 234.6 145 77.2
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 6.8e-60 234.2 144 72.2
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 8.9e-60 233.8 144 74.3
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 1.2e-59 233.4 144 74.3
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.2e-59 233.4 146 76.0
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.5e-59 233.0 144 73.6
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.0e-59 232.6 144 72.9
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 2.0e-59 232.6 144 71.5
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 2.0e-59 232.6 148 74.3
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 2.0e-59 232.6 148 74.3
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 2.0e-59 232.6 148 74.3
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 2.6e-59 232.3 146 71.2
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 4.4e-59 231.5 145 73.8
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 5.7e-59 231.1 162 71.0
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 5.7e-59 231.1 144 74.3
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 5.7e-59 231.1 146 73.3
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 5.7e-59 231.1 146 73.3
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 5.7e-59 231.1 144 75.0
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 7.5e-59 230.7 148 73.6
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 7.5e-59 230.7 146 74.7
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 9.8e-59 230.3 144 75.0
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.2e-58 229.2 144 72.9
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 2.2e-58 229.2 121 84.3
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 2.9e-58 228.8 145 72.4
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 3.7e-58 228.4 145 74.5
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 4.9e-58 228.0 145 72.4
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 6.3e-58 227.6 145 74.5
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 8.3e-58 227.3 144 72.2
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 8.3e-58 227.3 144 72.2
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 8.3e-58 227.3 144 74.3
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 1.1e-57 226.9 145 73.1
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 1.4e-57 226.5 145 74.5
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 1.4e-57 226.5 144 71.5
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 1.4e-57 226.5 145 73.1
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 1.4e-57 226.5 145 74.5
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 1.4e-57 226.5 144 73.6
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 1.8e-57 226.1 145 72.4
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 3.2e-57 225.3 145 73.1
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 3.2e-57 225.3 145 72.4
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 4.1e-57 224.9 148 73.0
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 5.4e-57 224.6 144 71.5
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 7.0e-57 224.2 146 71.9
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 7.0e-57 224.2 145 71.7
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 9.2e-57 223.8 145 73.1
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 9.2e-57 223.8 145 73.1
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 4.6e-56 221.5 145 69.7
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 5.9e-56 221.1 145 73.1
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 5.9e-56 221.1 145 73.1
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 7.8e-56 220.7 143 72.7
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 1.0e-55 220.3 145 71.7
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 1.0e-55 220.3 144 71.5
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 1.0e-55 220.3 145 72.4
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 1.3e-55 219.9 144 71.5
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 1.7e-55 219.5 145 72.4
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 1.7e-55 219.5 145 73.1
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 1.7e-55 219.5 145 72.4
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 1.7e-55 219.5 145 72.4
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 1.7e-55 219.5 145 72.4
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 1.7e-55 219.5 145 71.7
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 2.3e-55 219.2 144 71.5
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 2.9e-55 218.8 145 72.4
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 2.9e-55 218.8 145 70.3
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 3.9e-55 218.4 145 72.4
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 6.6e-55 217.6 145 71.0
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 8.6e-55 217.2 144 71.5
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 1.1e-54 216.9 145 71.7
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 2.5e-54 215.7 145 71.0
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 2.5e-54 215.7 145 71.7
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 2.5e-54 215.7 145 71.0
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 2.5e-54 215.7 145 71.7
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 3.3e-54 215.3 145 71.0
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 5.6e-54 214.5 144 70.1
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 5.6e-54 214.5 144 70.1
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 5.6e-54 214.5 144 70.1
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 7.3e-54 214.2 145 70.3
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 7.3e-54 214.2 146 71.9
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 7.3e-54 214.2 147 70.1
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 1.2e-53 213.4 144 69.4
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 2.1e-53 212.6 145 67.6
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 3.6e-53 211.8 146 71.2
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 4.7e-53 211.5 147 68.7
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 8.0e-53 210.7 147 69.4
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 1.8e-52 209.5 146 68.5
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 3.1e-52 208.8 146 71.2
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 4.0e-52 208.4 145 69.7
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 8.9e-52 207.2 145 68.3
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 4.4e-51 204.9 146 70.5
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 5.8e-51 204.5 146 70.5
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 7.5e-51 204.1 170 61.2
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 9.8e-51 203.8 147 66.7
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 1.7e-50 203.0 150 65.3
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 1.9e-49 199.5 147 66.7
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 5.4e-49 198.0 121 71.1
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 4.6e-48 194.9 149 65.1
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 2.8e-45 185.7 144 60.4
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 2.0e-43 179.5 146 60.3
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 2.2e-42 176.0 146 60.3
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 6.4e-42 174.5 145 59.3
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 5.4e-41 171.4 124 65.3
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 2.7e-40 169.1 116 67.2
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 6.0e-40 167.9 145 53.8
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 1.3e-39 166.8 109 72.5
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 1.5e-38 163.3 145 52.4
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 6.6e-31 137.9 105 65.7
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 3.6e-29 132.1 99 60.6
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 3.1e-20 102.4 144 41.7
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 2.0e-19 99.8 72 65.3
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 1.7e-18 96.7 49 83.7
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 5.4e-17 91.7 59 69.5
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 1.0e-15 87.4 48 77.1
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 6.2e-13 78.2 37 89.2
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 9.0e-12 74.3 43 72.1
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 1.3e-10 70.5 88 43.2
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 1.7e-10 70.1 44 68.2
HPP92_003723 Vanilla planifolia HOM05D004085 ORTHO05D005189 5.5e-09 65.1 80 50.0
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 1.8e-07 60.1 47 63.8
PGR102G2199 Punica granatum HOM05D004085 ORTHO05D000487 1.5e-06 57.0 48 56.2


User provided reference genes

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