Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045270.1 Olea europaea HOM05D005335 ORTHO05D006472 2.0e-22 108.2 54 100.0
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 9.2e-12 72.8 52 73.1
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 9.2e-12 72.8 52 73.1
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.2e-11 72.4 52 67.3
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.7e-11 71.2 52 69.2
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.7e-11 71.2 52 69.2
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.7e-11 71.2 52 69.2
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.5e-11 70.9 52 67.3
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 5.9e-11 70.1 52 69.2
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 2.9e-10 67.8 52 65.4
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 8.6e-10 66.2 52 65.4
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 2.5e-09 64.7 52 61.5
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 2.5e-09 64.7 52 61.5
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 3.3e-09 64.3 52 61.5
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 5.6e-09 63.5 52 59.6
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 5.6e-09 63.5 52 59.6
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 7.3e-09 63.2 52 59.6
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 9.5e-09 62.8 52 59.6
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 9.5e-09 62.8 52 59.6
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 1.2e-08 62.4 52 59.6
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 1.2e-08 62.4 52 59.6
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 2.1e-08 61.6 52 57.7
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 2.1e-08 61.6 52 59.6
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 4.7e-08 60.5 52 57.7
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 4.7e-08 60.5 52 57.7
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 4.7e-08 60.5 52 57.7
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.8e-07 56.6 52 59.6
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 6.8e-07 56.6 52 50.0
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 8.9e-07 56.2 52 59.6
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.2e-06 55.8 54 59.3
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 2.0e-06 55.1 52 61.5
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.4e-06 53.9 52 55.8


User provided reference genes

Program Settings