Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045215.1 Olea europaea HOM05D004355 ORTHO05D005228 2.8e-219 765.0 384 100.0
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 4.6e-49 199.5 436 33.7
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 1.0e-48 198.4 436 33.5
Oeu045216.1 Olea europaea HOM05D004355 ORTHO05D005228 6.2e-46 189.1 385 37.4
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 1.5e-44 184.5 448 33.5
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 8.4e-43 178.7 460 32.4
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 1.4e-42 177.9 450 33.1
Migut.J00528 Erythranthe guttata HOM05D004355 ORTHO05D005228 3.5e-41 173.3 415 33.7
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 8.2e-38 162.2 435 31.7
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 3.4e-36 156.8 418 31.6
unitig_899.g15220 Utricularia gibba HOM05D002910 ORTHO05D003235 1.7e-35 154.5 452 30.8
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 4.2e-34 149.8 401 32.2
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 4.2e-34 149.8 401 32.2
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 3.6e-33 146.7 400 32.8
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 3.7e-30 136.7 427 28.8
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 6.9e-29 132.5 428 28.5
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 1.5e-28 131.3 454 28.2
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 2.6e-28 130.6 394 30.5
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 1.0e-27 128.6 437 27.9
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 2.9e-27 127.1 413 28.6
unitig_746.g26764 Utricularia gibba HOM05D004355 ORTHO05D005228 2.9e-27 127.1 442 28.3
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 8.5e-27 125.6 450 27.3
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 1.1e-26 125.2 449 28.3
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 1.9e-26 124.4 451 28.2
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 5.5e-26 122.9 428 27.8
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 3.6e-25 120.2 439 28.5
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 1.5e-23 114.8 438 26.7
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 2.6e-23 114.0 424 27.4
Oeu012618.1 Olea europaea HOM05D004355 ORTHO05D005228 3.3e-23 113.6 69 81.2
ECA248G2910 Erigeron canadensis HOM05D004355 ORTHO05D005228 7.4e-23 112.5 397 27.5
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 7.4e-23 112.5 473 27.5
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 1.7e-22 111.3 430 28.6
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 1.7e-22 111.3 460 26.3
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 2.8e-22 110.5 447 27.7
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 3.7e-22 110.2 448 28.3
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 3.7e-22 110.2 442 28.3
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 6.3e-22 109.4 445 26.5
HanXRQChr13g0399881 Helianthus annuus HOM05D004355 ORTHO05D005228 8.2e-22 109.0 464 26.3
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 8.2e-22 109.0 450 27.8
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 1.4e-21 108.2 443 26.6
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 1.8e-21 107.8 459 26.6
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 2.4e-21 107.5 480 24.6
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 3.1e-21 107.1 464 27.6
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 4.1e-21 106.7 442 25.3
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 1.2e-20 105.1 454 26.0
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 1.5e-20 104.8 450 27.1
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 2.6e-20 104.0 463 26.1
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 2.6e-20 104.0 464 26.5
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 2.6e-20 104.0 445 26.3
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 3.4e-20 103.6 417 26.6
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 5.9e-20 102.8 413 25.7
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 5.9e-20 102.8 448 27.0
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 7.7e-20 102.4 447 25.7
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 1.0e-19 102.1 440 26.4
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.0e-19 102.1 411 27.7
Actinidia19660 Actinidia chinensis HOM05D004355 ORTHO05D005228 1.3e-19 101.7 419 26.5
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 1.7e-19 101.3 430 25.3
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 2.2e-19 100.9 429 26.8
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 2.2e-19 100.9 451 26.6
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 2.9e-19 100.5 430 25.6
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 3.8e-19 100.1 346 28.0
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 6.5e-19 99.4 440 26.1
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 8.5e-19 99.0 435 25.3
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 1.1e-18 98.6 453 26.5
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 1.4e-18 98.2 436 28.0
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.4e-18 98.2 435 25.1
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.9e-18 97.8 438 24.2
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.9e-18 97.8 435 25.1
ECA233G2716 Erigeron canadensis HOM05D004355 ORTHO05D005228 2.5e-18 97.4 415 26.7
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 3.2e-18 97.1 407 24.8
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 4.2e-18 96.7 429 25.9
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 4.2e-18 96.7 440 26.1
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 4.2e-18 96.7 466 25.5
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 4.2e-18 96.7 440 25.7
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 4.2e-18 96.7 453 26.3
PGR004G2422 Punica granatum HOM05D004355 ORTHO05D005228 7.2e-18 95.9 418 25.8
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 1.2e-17 95.1 444 25.7
Oeu045217.1 Olea europaea HOM05D004355 ORTHO05D005228 1.6e-17 94.7 233 32.6
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 2.1e-17 94.4 444 26.4
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 2.1e-17 94.4 445 25.8
Lj2P114T36 Lonicera japonica HOM05D004355 ORTHO05D005228 2.1e-17 94.4 217 30.9
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 2.1e-17 94.4 453 25.4
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 2.1e-17 94.4 489 24.5
Lsat_1_v5_gn_6_31260 Lactuca sativa HOM05D004355 ORTHO05D005228 2.7e-17 94.0 427 27.9
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 2.7e-17 94.0 442 25.1
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 3.6e-17 93.6 460 27.2
Dinv37299 Davidia involucrata HOM05D004355 ORTHO05D005228 3.6e-17 93.6 284 29.2
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 4.7e-17 93.2 439 25.5
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 4.7e-17 93.2 439 25.3
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 1.0e-16 92.0 454 26.2
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 1.0e-16 92.0 431 26.2
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 1.8e-16 91.3 421 26.4
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 2.3e-16 90.9 429 26.1
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 2.3e-16 90.9 386 25.6
HanXRQChr11g0350251 Helianthus annuus HOM05D004355 ORTHO05D005228 2.3e-16 90.9 251 27.5
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 3.9e-16 90.1 425 25.4
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 6.7e-16 89.4 416 25.5
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 6.7e-16 89.4 337 26.4
FAN14G0897 Fragaria x ananassa HOM05D004355 ORTHO05D005228 8.8e-16 89.0 285 26.3
FAN14G5907 Fragaria x ananassa HOM05D004355 ORTHO05D005228 8.8e-16 89.0 285 26.3
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 1.1e-15 88.6 423 25.3
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 2.0e-15 87.8 255 27.8
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 2.6e-15 87.4 423 25.3
Lsat_1_v5_gn_6_31300 Lactuca sativa HOM05D004355 ORTHO05D005228 3.3e-15 87.0 420 25.0
RcHm_v2.0_Chr3g0469941 Rosa chinensis HOM05D004355 ORTHO05D005228 3.3e-15 87.0 241 29.0
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 4.4e-15 86.7 433 26.6
GSVIVG01025706001 Vitis vinifera HOM05D004355 ORTHO05D005228 4.4e-15 86.7 219 30.1
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 1.3e-14 85.1 445 24.0
AUR62040465 Chenopodium quinoa HOM05D004355 ORTHO05D005228 2.8e-14 84.0 240 27.5
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.8e-14 84.0 356 27.0
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 2.8e-14 84.0 467 23.8
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 2.8e-14 84.0 276 26.1
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 6.3e-14 82.8 460 23.9
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.1e-13 82.0 357 25.2
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.4e-13 81.6 357 25.2
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 1.8e-13 81.3 436 26.6
CiPaw.09G174200 Carya illinoinensis HOM05D004355 ORTHO05D005228 2.4e-13 80.9 396 25.5
FAN09G2012 Fragaria x ananassa HOM05D004355 ORTHO05D005228 9.1e-13 79.0 337 26.1
Lsat_1_v5_gn_6_70860 Lactuca sativa HOM05D004355 ORTHO05D005228 3.5e-12 77.0 224 25.9
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 3.5e-12 77.0 421 24.2
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 2.2e-11 74.3 271 26.9
Eucgr.A01137 Eucalyptus grandis HOM05D004355 ORTHO05D005228 2.9e-11 73.9 241 27.4
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 3.8e-11 73.6 346 23.4
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 5.0e-11 73.2 267 25.8
Lsat_1_v5_gn_6_31200 Lactuca sativa HOM05D004355 ORTHO05D005228 5.0e-11 73.2 344 23.3
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 1.5e-10 71.6 241 26.6
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 1.6e-09 68.2 375 24.8
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 2.1e-09 67.8 259 25.5
ECA233G3839 Erigeron canadensis HOM05D004355 ORTHO05D005228 2.3e-08 64.3 223 25.6
ECA233G2161 Erigeron canadensis HOM05D004355 ORTHO05D005228 4.8e-06 56.6 410 20.7


User provided reference genes

Program Settings