Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045176.1 Olea europaea HOM05D004036 ORTHO05D004576 1.5e-107 392.9 202 100.0
MSTRG.14001 Avicennia marina HOM05D004036 ORTHO05D004576 2.9e-50 202.6 201 61.2
MSTRG.1647 Avicennia marina HOM05D004036 ORTHO05D004576 7.8e-48 194.5 196 59.2
SalBow8G4507 Salvia bowleyana HOM05D004036 ORTHO05D004576 1.8e-44 183.3 199 59.8
SalBow8G4816 Salvia bowleyana HOM05D004036 ORTHO05D004576 1.8e-44 183.3 199 59.8
Oeu031563.3 Olea europaea HOM05D004036 ORTHO05D004576 2.0e-43 179.9 228 47.8
Migut.E01501 Erythranthe guttata HOM05D004036 ORTHO05D004576 3.0e-39 166.0 203 51.7
Cc08_g08300 Coffea canephora HOM05D004036 ORTHO05D004576 3.9e-39 165.6 196 51.5
Gohir.D06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.6e-37 160.2 208 50.0
Manes.03G064800 Manihot esculenta HOM05D004036 ORTHO05D004576 2.1e-37 159.8 208 49.0
Duzib187G1985 Durio zibethinus HOM05D004036 ORTHO05D004576 4.8e-37 158.7 207 50.2
Manes.16G068200 Manihot esculenta HOM05D004036 ORTHO05D004576 8.1e-37 157.9 199 49.2
Peaxi162Scf00105g01426 Petunia axillaris HOM05D004036 ORTHO05D004576 8.1e-37 157.9 204 50.5
Atru.chr7.2325 Acer truncatum HOM05D004036 ORTHO05D004576 3.1e-36 156.0 199 49.7
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 3.1e-36 156.0 208 51.0
Nitab4.5_0000125g0270 Nicotiana tabacum HOM05D004036 ORTHO05D004576 3.1e-36 156.0 204 49.5
Duzib150G0431 Durio zibethinus HOM05D004036 ORTHO05D004576 5.3e-36 155.2 207 49.3
SGA_v2.0_scaffold163G38098 Striga asiatica HOM05D004036 ORTHO05D004576 9.0e-36 154.5 200 50.0
COL.COLO4_24066 Corchorus olitorius HOM05D004036 ORTHO05D004576 1.2e-35 154.1 208 50.0
Gohir.A06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.2e-35 154.1 208 48.1
Nitab4.5_0006579g0060 Nicotiana tabacum HOM05D004036 ORTHO05D004576 2.6e-35 152.9 204 48.5
Oeu019418.1 Olea europaea HOM05D004036 ORTHO05D004576 3.4e-35 152.5 261 39.8
Thecc.09G144100 Theobroma cacao HOM05D004036 ORTHO05D004576 7.6e-35 151.4 208 48.6
Cfa013210 Carpinus fangiana HOM05D004036 ORTHO05D004576 1.3e-34 150.6 199 49.2
FAN15G1681 Fragaria x ananassa HOM05D004036 ORTHO05D004576 2.9e-34 149.4 204 52.0
DCAR_003061 Daucus carota HOM05D004036 ORTHO05D004576 4.9e-34 148.7 197 47.7
Dinv35883 Davidia involucrata HOM05D004036 ORTHO05D004576 4.9e-34 148.7 179 53.1
RcHm_v2.0_Chr6g0312751 Rosa chinensis HOM05D004036 ORTHO05D004576 1.4e-33 147.1 198 49.5
FAN20G2367 Fragaria x ananassa HOM05D004036 ORTHO05D004576 5.4e-33 145.2 202 51.0
FvH4_2g30160 Fragaria vesca HOM05D004036 ORTHO05D004576 7.1e-33 144.8 204 51.0
FAN24G0425 Fragaria x ananassa HOM05D004036 ORTHO05D004576 7.1e-33 144.8 204 51.0
FAN27G0504 Fragaria x ananassa HOM05D004036 ORTHO05D004576 7.1e-33 144.8 202 51.5
Prupe.1G466700 Prunus persica HOM05D004036 ORTHO05D004576 9.3e-33 144.4 193 48.2
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 2.7e-32 142.9 196 49.0
QL12p031289 Quercus lobata HOM05D004036 ORTHO05D004576 2.7e-32 142.9 198 49.0
CAN.G21.9 Capsicum annuum HOM05D004036 ORTHO05D004576 3.5e-32 142.5 201 47.8
CiPaw.08G015700 Carya illinoinensis HOM05D004036 ORTHO05D004576 6.0e-32 141.7 193 49.7
TAR624G0048 Trochodendron aralioides HOM05D004036 ORTHO05D004576 6.0e-32 141.7 201 43.8
Ciclev10009480m.g Citrus clementina HOM05D004036 ORTHO05D004576 1.3e-31 140.6 198 48.5
Haze_21623 Corylus avellana HOM05D004036 ORTHO05D004576 1.3e-31 140.6 239 42.3
Sopen08g021750 Solanum pennellii HOM05D004036 ORTHO05D004576 2.3e-31 139.8 202 45.5
PGSC0003DMG400033628 Solanum tuberosum HOM05D004036 ORTHO05D004576 3.0e-31 139.4 201 46.8
CSS0014753 Camellia sinensis var. sinensis HOM05D004036 ORTHO05D004576 5.1e-31 138.7 154 53.9
Sabra18G0035300 Salix brachista HOM05D004036 ORTHO05D004576 1.9e-30 136.7 197 44.7
Solyc08g067810.3 Solanum lycopersicum HOM05D004036 ORTHO05D004576 1.9e-30 136.7 201 45.8
vmacro05446 Vaccinium macrocarpon HOM05D004036 ORTHO05D004576 2.5e-30 136.3 224 42.9
Gorai.009G011700 Gossypium raimondii HOM05D004036 ORTHO05D004576 4.3e-30 135.6 207 46.4
Potri.006G246600 Populus trichocarpa HOM05D004036 ORTHO05D004576 5.6e-30 135.2 197 45.7
TAR626G0352 Trochodendron aralioides HOM05D004036 ORTHO05D004576 5.6e-30 135.2 204 42.2
Gohir.D09G022200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 7.3e-30 134.8 207 46.4
Gohir.A05G010600 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.3e-29 134.0 202 47.5
ECA240G1837 Erigeron canadensis HOM05D004036 ORTHO05D004576 1.6e-29 133.7 195 45.1
Gohir.A12G126300 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.6e-29 133.7 207 46.4
Lsat_1_v5_gn_3_108141 Lactuca sativa HOM05D004036 ORTHO05D004576 2.1e-29 133.3 178 49.4
Gohir.D12G195700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.8e-29 132.9 207 46.4
Gohir.A11G185400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.8e-29 132.1 207 45.9
Gohir.D05G335100 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.8e-29 132.1 207 45.9
HanXRQChr13g0409481 Helianthus annuus HOM05D004036 ORTHO05D004576 6.2e-29 131.7 185 45.9
TWI34G1922 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 1.1e-28 131.0 184 45.7
Gorai.004G151900 Gossypium raimondii HOM05D004036 ORTHO05D004576 1.4e-28 130.6 207 45.9
Gohir.A12G241700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.8e-28 130.2 206 44.7
Gohir.D09G023175 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.4e-28 129.8 207 45.4
Gohir.D01G158400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.3e-28 128.6 206 43.7
TWI63G0992 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 6.9e-28 128.3 200 44.5
Gorai.010G053700 Gossypium raimondii HOM05D004036 ORTHO05D004576 3.4e-27 125.9 152 48.7
Gorai.008G052900 Gossypium raimondii HOM05D004036 ORTHO05D004576 3.8e-26 122.5 207 44.0
Eucgr.C01818 Eucalyptus grandis HOM05D004036 ORTHO05D004576 6.4e-26 121.7 198 41.9
CANSAT56G2568 Cannabis sativa HOM05D004036 ORTHO05D004576 1.4e-25 120.6 198 44.4
Gohir.D05G011350 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.4e-25 120.6 203 42.4
SGA_v2.0_scaffold169G38632 Striga asiatica HOM05D004036 ORTHO05D004576 1.9e-25 120.2 204 44.1
Phvul.001G055700 Phaseolus vulgaris HOM05D004036 ORTHO05D004576 3.2e-25 119.4 198 42.9
VMungo0647G1622 Vigna mungo HOM05D004036 ORTHO05D004576 4.2e-25 119.0 200 43.0
Sabra06G0192900 Salix brachista HOM05D004036 ORTHO05D004576 5.4e-25 118.6 205 41.5
MBI01_g10034_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 1.3e-23 114.0 217 38.7
Glyma.17G203900 Glycine max HOM05D004036 ORTHO05D004576 5.1e-23 112.1 202 40.1
Glyma.14G129200 Glycine max HOM05D004036 ORTHO05D004576 1.1e-22 110.9 204 42.2
Cpa.g.sc91.6 Carica papaya HOM05D004036 ORTHO05D004576 2.5e-22 109.8 110 56.4
Thhalv10004997m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 3.3e-22 109.4 178 42.7
Aqoxy7G01846 Aquilegia oxysepala HOM05D004036 ORTHO05D004576 4.3e-22 109.0 193 38.9
C07p42280 Brassica napus HOM05D004036 ORTHO05D004576 4.3e-22 109.0 198 41.4
BolC7t44757H Brassica oleracea HOM05D004036 ORTHO05D004576 4.3e-22 109.0 198 41.4
ClCG05G017210 Citrullus lanatus HOM05D004036 ORTHO05D004576 5.6e-22 108.6 182 40.7
AT5G25540 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 7.4e-22 108.2 198 41.9
arahy.Tifrunner.gnm1.ann1.AAJ54F Arachis hypogaea HOM05D004036 ORTHO05D004576 1.3e-21 107.5 205 42.0
DCAR_007682 Daucus carota HOM05D004036 ORTHO05D004576 2.8e-21 106.3 131 51.9
arahy.Tifrunner.gnm1.ann1.7NC9IZ Arachis hypogaea HOM05D004036 ORTHO05D004576 3.7e-21 105.9 205 42.0
CiPaw.03G235800 Carya illinoinensis HOM05D004036 ORTHO05D004576 6.2e-21 105.1 203 38.9
QL02p086217 Quercus lobata HOM05D004036 ORTHO05D004576 1.1e-20 104.4 205 37.6
TPR.G20095 Trifolium pratense HOM05D004036 ORTHO05D004576 1.4e-20 104.0 195 39.5
A06p36250 Brassica napus HOM05D004036 ORTHO05D004576 2.4e-20 103.2 198 39.9
BraA06t26547Z Brassica rapa HOM05D004036 ORTHO05D004576 2.4e-20 103.2 198 39.9
CARHR187840 Cardamine hirsuta HOM05D004036 ORTHO05D004576 2.4e-20 103.2 171 41.5
Medtr1g011280 Medicago truncatula HOM05D004036 ORTHO05D004576 4.0e-20 102.4 203 37.9
Gohir.A07G032200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 6.9e-20 101.7 152 45.4
Gohir.A08G237500 Gossypium hirsutum HOM05D004036 ORTHO05D004576 6.9e-20 101.7 152 45.4
Aa31LG3G15750 Aethionema arabicum HOM05D004036 ORTHO05D004576 9.0e-20 101.3 199 38.7
Psat6g031000 Pisum sativum HOM05D004036 ORTHO05D004576 9.0e-20 101.3 200 37.5
CsaV3_3G046690 Cucumis sativus L. HOM05D004036 ORTHO05D004576 2.6e-19 99.8 207 40.1
Aa31LG11G4630 Aethionema arabicum HOM05D004036 ORTHO05D004576 7.6e-19 98.2 194 37.1
Sp2g22000 Schrenkiella parvula HOM05D004036 ORTHO05D004576 1.0e-18 97.8 192 37.5
AL6G37340 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 1.7e-18 97.1 198 39.9
Nn2g11835 Nelumbo nucifera HOM05D004036 ORTHO05D004576 1.7e-18 97.1 153 43.1
PGR031G0366 Punica granatum HOM05D004036 ORTHO05D004576 1.7e-18 97.1 206 36.4
THA.LOC104799217 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 2.9e-18 96.3 197 36.0
Lj5g0012132 Lotus japonicus HOM05D004036 ORTHO05D004576 3.8e-18 95.9 202 37.6
BcaC03g13367 Brassica carinata HOM05D004036 ORTHO05D004576 4.9e-18 95.5 179 41.3
Carub.0006s2340 Capsella rubella HOM05D004036 ORTHO05D004576 6.5e-18 95.1 200 39.0
MD08G1136600 Malus domestica HOM05D004036 ORTHO05D004576 8.4e-18 94.7 81 65.4
Sc23g0007020 Simmondsia chinensis HOM05D004036 ORTHO05D004576 8.4e-18 94.7 153 41.2
MELO3C003669.2 Cucumis melo HOM05D004036 ORTHO05D004576 1.9e-17 93.6 153 39.2
AL6G22100 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 2.5e-17 93.2 203 36.0
Sed0023915 Sechium edule HOM05D004036 ORTHO05D004576 2.5e-17 93.2 202 39.6
THA.LOC104815044 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 3.2e-17 92.8 198 37.9
Actinidia14638 Actinidia chinensis HOM05D004036 ORTHO05D004576 7.1e-17 91.7 163 47.2
CARHR201790 Cardamine hirsuta HOM05D004036 ORTHO05D004576 7.1e-17 91.7 202 34.2
BcaC04g19226 Brassica carinata HOM05D004036 ORTHO05D004576 2.1e-16 90.1 195 35.4
C09p65420 Brassica napus HOM05D004036 ORTHO05D004576 2.1e-16 90.1 196 35.2
BolC9t59367H Brassica oleracea HOM05D004036 ORTHO05D004576 2.1e-16 90.1 196 35.2
EL10Ac2g02537 Beta vulgaris HOM05D004036 ORTHO05D004576 2.7e-16 89.7 206 41.3
Nn8g39276 Nelumbo nucifera HOM05D004036 ORTHO05D004576 2.7e-16 89.7 155 39.4
Thhalv10014836m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 3.5e-16 89.4 204 40.2
Lalb_Chr08g0243781 Lupinus albus HOM05D004036 ORTHO05D004576 7.9e-16 88.2 193 37.8
BcaNung01927 Brassica carinata HOM05D004036 ORTHO05D004576 1.0e-15 87.8 195 37.9
Sp6g32160 Schrenkiella parvula HOM05D004036 ORTHO05D004576 1.0e-15 87.8 204 36.8
TAR383G0233 Trochodendron aralioides HOM05D004036 ORTHO05D004576 1.8e-15 87.0 144 39.6
BolC2t12008H Brassica oleracea HOM05D004036 ORTHO05D004576 2.3e-15 86.7 196 35.2
AT5G11440 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 3.0e-15 86.3 202 34.7
AUR62024838 Chenopodium quinoa HOM05D004036 ORTHO05D004576 3.0e-15 86.3 200 35.5
BcaB01g06306 Brassica carinata HOM05D004036 ORTHO05D004576 3.9e-15 85.9 200 36.0
Hund25658 Selenicereus undatus HOM05D004036 ORTHO05D004576 3.9e-15 85.9 194 34.5
Lalb_Chr23g0269031 Lupinus albus HOM05D004036 ORTHO05D004576 1.5e-14 84.0 196 36.2
HanXRQChr03g0077811 Helianthus annuus HOM05D004036 ORTHO05D004576 1.9e-14 83.6 85 56.5
C02p05040 Brassica napus HOM05D004036 ORTHO05D004576 3.3e-14 82.8 179 34.6
PSO063G5334 Papaver somniferum HOM05D004036 ORTHO05D004576 3.3e-14 82.8 194 33.5
A02p01010 Brassica napus HOM05D004036 ORTHO05D004576 1.3e-13 80.9 84 53.6
BraA02t05082Z Brassica rapa HOM05D004036 ORTHO05D004576 1.3e-13 80.9 84 53.6
Carub.0006s0989 Capsella rubella HOM05D004036 ORTHO05D004576 1.3e-13 80.9 207 34.8
Ah.12g063370 Amaranthus hybridus HOM05D004036 ORTHO05D004576 1.6e-13 80.5 200 35.5
BcaB08g37059 Brassica carinata HOM05D004036 ORTHO05D004576 1.6e-13 80.5 85 54.1
BcaB07g29991 Brassica carinata HOM05D004036 ORTHO05D004576 2.1e-13 80.1 175 36.6
A10p26310 Brassica napus HOM05D004036 ORTHO05D004576 2.1e-13 80.1 91 52.7
MBI04_g26645_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 2.8e-13 79.7 205 34.1
C02p59450 Brassica napus HOM05D004036 ORTHO05D004576 3.7e-13 79.3 99 51.5
BcaNung07259 Brassica carinata HOM05D000175 ORTHO05D000481 4.8e-13 79.0 173 35.3
A02p39670 Brassica napus HOM05D004036 ORTHO05D004576 4.8e-13 79.0 91 53.8
BraA02t08932Z Brassica rapa HOM05D004036 ORTHO05D004576 4.8e-13 79.0 91 53.8
AUR62032381 Chenopodium quinoa HOM05D004036 ORTHO05D004576 4.8e-13 79.0 198 35.4
GSVIVG01015440001 Vitis vinifera HOM05D004036 ORTHO05D004576 8.2e-13 78.2 91 54.9
BolC3t13087H Brassica oleracea HOM05D004036 ORTHO05D004576 1.1e-12 77.8 189 35.4
BcaB01g05484 Brassica carinata HOM05D004036 ORTHO05D004576 1.4e-12 77.4 189 35.4
A03p05000 Brassica napus HOM05D004036 ORTHO05D004576 1.8e-12 77.0 95 48.4
PSO782G2888 Papaver somniferum HOM05D004036 ORTHO05D004576 6.9e-12 75.1 193 33.7
Gohir.D04G088301 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.2e-11 74.3 56 62.5
Gohir.D12G143101 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.2e-11 74.3 56 62.5
BraA10t44688Z Brassica rapa HOM05D004036 ORTHO05D004576 5.8e-11 72.0 197 33.0
BcaB04g19786 Brassica carinata HOM05D004036 ORTHO05D004576 7.6e-11 71.6 181 32.0
C09p06800 Brassica napus HOM05D004036 ORTHO05D004576 7.6e-11 71.6 114 39.5
BolC9t53601H Brassica oleracea HOM05D004036 ORTHO05D004576 7.6e-11 71.6 114 39.5
C03p05740 Brassica napus HOM05D004036 ORTHO05D004576 2.9e-10 69.7 95 47.4
unitig_85.g27159 Utricularia gibba HOM05D050274 ORTHO05D004576 6.5e-10 68.6 198 31.8
Sed0025074 Sechium edule HOM05D004036 ORTHO05D004576 4.2e-09 65.9 176 33.5
Actinidia15710 Actinidia chinensis HOM05D004036 ORTHO05D004576 7.1e-09 65.1 101 42.6
ATR0037G046 Amborella trichopoda HOM05D004036 ORTHO05D004576 4.6e-08 62.4 207 31.9
BcaC09g50856 Brassica carinata HOM05D004036 ORTHO05D004576 7.9e-08 61.6 151 31.8
C07p03200 Brassica napus HOM05D004036 ORTHO05D004576 1.0e-07 61.2 152 30.9
BolC7t40715H Brassica oleracea HOM05D004036 ORTHO05D004576 1.3e-07 60.8 152 30.9
Phvul.009G097900 Phaseolus vulgaris HOM05D004036 ORTHO05D050263 1.8e-07 60.5 107 35.5
Prupe.7G234300 Prunus persica HOM05D004036 ORTHO05D004576 1.8e-07 60.5 174 29.9
CBR_g37677 Chara braunii HOM05D000001 ORTHO05D004044 6.7e-07 58.5 125 34.4
C01p19860 Brassica napus HOM05D004036 ORTHO05D004576 8.7e-07 58.2 61 44.3
BolC1t01914H Brassica oleracea HOM05D004036 ORTHO05D004576 8.7e-07 58.2 61 44.3
BraA08t33004Z Brassica rapa HOM05D004036 ORTHO05D004576 7.4e-06 55.1 45 51.1
VMungo1309G1209 Vigna mungo HOM05D033454 ORTHO05D050263 7.4e-06 55.1 43 58.1


User provided reference genes

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