Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045136.1 Olea europaea HOM05D002758 ORTHO05D002885 6.1e-52 207.2 106 100.0
Oeu045145.1 Olea europaea HOM05D002758 ORTHO05D002885 3.4e-34 148.3 111 72.1
Oeu027807.1 Olea europaea HOM05D002758 ORTHO05D002885 1.9e-21 105.9 129 53.5
Cc04_g04270 Coffea canephora HOM05D002758 ORTHO05D002885 1.4e-19 99.8 123 55.3
Nitab4.5_0005728g0010 Nicotiana tabacum HOM05D002758 ORTHO05D002885 3.1e-19 98.6 135 48.1
Sopen03g035550 Solanum pennellii HOM05D002758 ORTHO05D002885 5.2e-19 97.8 132 48.5
Peaxi162Scf00332g00756 Petunia axillaris HOM05D002758 ORTHO05D002885 1.2e-18 96.7 130 50.0
PGSC0003DMG400000615 Solanum tuberosum HOM05D002758 ORTHO05D002885 2.0e-18 95.9 129 50.4
Solyc03g116630.3 Solanum lycopersicum HOM05D002758 ORTHO05D002885 2.2e-17 92.4 136 45.6
MSTRG.11135 Avicennia marina HOM05D002758 ORTHO05D002885 3.7e-17 91.7 133 49.6
SGA_v2.0_scaffold5G02683 Striga asiatica HOM05D002758 ORTHO05D002885 1.1e-16 90.1 133 46.6
Nitab4.5_0000373g0020 Nicotiana tabacum HOM05D002758 ORTHO05D002885 2.4e-16 89.0 126 46.8
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 2.4e-16 89.0 132 47.0
Nitab4.5_0001764g0140 Nicotiana tabacum HOM05D002758 ORTHO05D002885 7.1e-16 87.4 125 48.0
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 9.2e-16 87.0 125 45.6
Migut.I00776 Erythranthe guttata HOM05D002758 ORTHO05D002885 9.2e-16 87.0 136 46.3
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 1.2e-15 86.7 132 45.5
SGA_v2.0_scaffold37G14775 Striga asiatica HOM05D002758 ORTHO05D002885 2.7e-15 85.5 141 46.8
Ciclev10026775m.g Citrus clementina HOM05D002758 ORTHO05D002885 3.5e-15 85.1 124 42.7
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 7.8e-15 84.0 129 45.7
CiPaw.01G246400 Carya illinoinensis HOM05D002758 ORTHO05D002885 1.1e-13 80.1 127 40.9
Thecc.06G021700 Theobroma cacao HOM05D002758 ORTHO05D002885 1.1e-13 80.1 126 42.9
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 3.3e-13 78.6 132 40.9
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 9.5e-13 77.0 129 44.2
Duzib160G0702 Durio zibethinus HOM05D002758 ORTHO05D002885 9.5e-13 77.0 122 44.3
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 9.5e-13 77.0 134 40.3
FAN05G1526 Fragaria x ananassa HOM05D002758 ORTHO05D002885 1.2e-12 76.6 119 42.0
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.2e-12 76.6 133 39.8
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 2.1e-12 75.9 125 40.0
FvH4_6g29910 Fragaria vesca HOM05D002758 ORTHO05D002885 2.1e-12 75.9 118 41.5
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 3.6e-12 75.1 134 39.6
FAN02G3379 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.7e-12 74.7 118 40.7
FAN14G2484 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.7e-12 74.7 118 40.7
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 8.1e-12 73.9 141 37.6
Duzib235G1225 Durio zibethinus HOM05D002758 ORTHO05D002885 1.1e-11 73.6 128 40.6
COL.COLO4_12950 Corchorus olitorius HOM05D002758 ORTHO05D002885 1.4e-11 73.2 129 41.9
Manes.11G055700 Manihot esculenta HOM05D002758 ORTHO05D002885 1.4e-11 73.2 122 39.3
Gohir.A10G074300 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-11 72.4 129 42.6
Atru.chr1.2990 Acer truncatum HOM05D002758 ORTHO05D002885 3.1e-11 72.0 127 37.0
Gohir.A07G036200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 6.8e-11 70.9 129 38.0
Gohir.D10G077100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.2e-10 70.1 129 41.9
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.5e-10 69.7 135 37.0
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 1.5e-10 69.7 136 37.5
Prupe.3G084900 Prunus persica HOM05D002758 ORTHO05D002885 4.4e-10 68.2 128 39.8
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 5.8e-10 67.8 132 37.1
QL05p029455 Quercus lobata HOM05D002758 ORTHO05D002885 5.8e-10 67.8 130 36.9
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 5.8e-10 67.8 128 38.3
PSO210G3002 Papaver somniferum HOM05D002758 ORTHO05D002885 7.6e-10 67.4 115 42.6
RcHm_v2.0_Chr2g0135861 Rosa chinensis HOM05D002758 ORTHO05D002885 7.6e-10 67.4 121 38.0
Gorai.009G130900 Gossypium raimondii HOM05D002758 ORTHO05D002885 9.9e-10 67.0 121 38.0
Gohir.A05G125833 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-09 66.6 126 37.3
Gohir.A05G125900 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-09 66.6 126 37.3
Gorai.011G083300 Gossypium raimondii HOM05D002758 ORTHO05D002885 1.3e-09 66.6 126 41.3
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 1.3e-09 66.6 120 39.2
CAN.G1503.1 Capsicum annuum HOM05D000091 ORTHO05D003679 2.2e-09 65.9 109 44.0
Gohir.A05G016000 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.2e-09 65.9 137 37.2
Gohir.D05G017100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.2e-09 65.9 137 37.2
Gorai.009G017300 Gossypium raimondii HOM05D002758 ORTHO05D002885 2.2e-09 65.9 137 37.2
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 2.9e-09 65.5 140 35.7
Gohir.D05G126800 Gossypium hirsutum HOM05D002758 ORTHO05D002885 3.8e-09 65.1 126 36.5
Manes.04G113800 Manihot esculenta HOM05D002758 ORTHO05D002885 3.8e-09 65.1 133 36.8
FAN26G2290 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.9e-09 64.7 141 34.8
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 4.9e-09 64.7 129 35.7
QL09p026717 Quercus lobata HOM05D002758 ORTHO05D002885 4.9e-09 64.7 133 36.1
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 6.4e-09 64.3 131 35.1
Gorai.001G042500 Gossypium raimondii HOM05D002758 ORTHO05D002885 6.4e-09 64.3 130 34.6
FAN23G2585 Fragaria x ananassa HOM05D002758 ORTHO05D002885 8.4e-09 63.9 141 34.8
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 8.4e-09 63.9 112 40.2
Duzib168G0478 Durio zibethinus HOM05D002758 ORTHO05D002885 1.1e-08 63.5 141 34.0
FAN28G2446 Fragaria x ananassa HOM05D000315 ORTHO05D001379 1.1e-08 63.5 138 34.1
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 1.1e-08 63.5 131 36.6
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea HOM05D002758 ORTHO05D002885 1.4e-08 63.2 142 33.8
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea HOM05D002758 ORTHO05D002885 1.4e-08 63.2 141 34.0
MD17G1209300 Malus domestica HOM05D002758 ORTHO05D002885 1.4e-08 63.2 133 35.3
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 1.9e-08 62.8 131 36.6
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 1.9e-08 62.8 127 36.2
CiPaw.02G156300 Carya illinoinensis HOM05D002758 ORTHO05D002885 1.9e-08 62.8 128 38.3
Gohir.D07G040200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.9e-08 62.8 129 33.3
Hund00526 Selenicereus undatus HOM05D002758 ORTHO05D002885 1.9e-08 62.8 134 38.1
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 1.9e-08 62.8 142 35.9
Cpa.g.sc10.256 Carica papaya HOM05D002758 ORTHO05D002885 2.4e-08 62.4 131 35.9
FAN19G2709 Fragaria x ananassa HOM05D002758 ORTHO05D002885 2.4e-08 62.4 141 35.5
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 2.4e-08 62.4 139 34.5
Psat4g039800 Pisum sativum HOM05D002758 ORTHO05D002885 2.4e-08 62.4 135 34.1
TWI32G0299 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 2.4e-08 62.4 121 38.8
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 3.2e-08 62.0 131 37.4
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 3.2e-08 62.0 135 34.1
Sed0016169 Sechium edule HOM05D002758 ORTHO05D002885 3.2e-08 62.0 143 34.3
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 5.4e-08 61.2 82 47.6
CAN.G403.8 Capsicum annuum HOM05D002758 ORTHO05D002885 9.2e-08 60.5 83 45.8
Medtr4g114600 Medicago truncatula HOM05D002758 ORTHO05D002885 9.2e-08 60.5 147 32.7
Potri.018G131100 Populus trichocarpa HOM05D002758 ORTHO05D002885 9.2e-08 60.5 143 33.6
PGR031G0668 Punica granatum HOM05D002758 ORTHO05D002885 9.2e-08 60.5 126 37.3
SalBow1G1971 Salvia bowleyana HOM05D002758 ORTHO05D002885 9.2e-08 60.5 128 35.2
Solyc07g008280.4 Solanum lycopersicum HOM05D002758 ORTHO05D002885 9.2e-08 60.5 83 44.6
ClCG07G012650 Citrullus lanatus HOM05D002758 ORTHO05D002885 1.2e-07 60.1 131 35.9
TWI18G1221 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 1.2e-07 60.1 133 35.3
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 1.6e-07 59.7 145 34.5
DCAR_020919 Daucus carota HOM05D002758 ORTHO05D002885 2.1e-07 59.3 111 39.6
Glyma.13G365000 Glycine max HOM05D002758 ORTHO05D002885 2.1e-07 59.3 108 38.0
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 2.1e-07 59.3 151 32.5
Sopen07g004170 Solanum pennellii HOM05D002758 ORTHO05D002885 2.1e-07 59.3 83 43.4
RcHm_v2.0_Chr2g0088291 Rosa chinensis HOM05D002758 ORTHO05D002885 2.7e-07 58.9 141 34.0
BcaC08g44003 Brassica carinata HOM05D002758 ORTHO05D002885 3.5e-07 58.5 123 32.5
CANSAT56G1388 Cannabis sativa HOM05D002758 ORTHO05D002885 3.5e-07 58.5 136 33.8
Dinv36518 Davidia involucrata HOM05D002758 ORTHO05D002885 3.5e-07 58.5 132 36.4
HanXRQChr12g0356261 Helianthus annuus HOM05D002758 ORTHO05D002885 3.5e-07 58.5 135 33.3
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 3.5e-07 58.5 141 33.3
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 3.5e-07 58.5 135 34.1
Solyc06g068110.3 Solanum lycopersicum HOM05D002758 ORTHO05D002885 3.5e-07 58.5 115 40.0
A05p18910 Brassica napus HOM05D002758 ORTHO05D002885 4.6e-07 58.2 123 32.5
CDE04G0331 Ceratophyllum demersum HOM05D002758 ORTHO05D002885 4.6e-07 58.2 124 33.1
Ca_21675_v3 Cicer arietinum L. HOM05D002758 ORTHO05D002885 6.0e-07 57.8 154 30.5
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 6.0e-07 57.8 131 34.4
FvH4_1g03160 Fragaria vesca HOM05D002758 ORTHO05D002885 7.8e-07 57.4 83 45.8
HanXRQChr10g0315561 Helianthus annuus HOM05D002758 ORTHO05D002885 7.8e-07 57.4 141 30.5
PGSC0003DMG400028538 Solanum tuberosum HOM05D002758 ORTHO05D002885 1.3e-06 56.6 95 42.1
Aqoxy7G02215 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 1.7e-06 56.2 133 33.8
Eucgr.C01181 Eucalyptus grandis HOM05D002758 ORTHO05D002885 1.7e-06 56.2 139 33.1
Lsat_1_v5_gn_5_95300 Lactuca sativa HOM05D002758 ORTHO05D002885 1.7e-06 56.2 133 33.8
GSVIVG01015544001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.7e-06 56.2 133 36.1
Hund06567 Selenicereus undatus HOM05D002758 ORTHO05D002885 2.3e-06 55.8 133 33.8
TPR.G26478 Trifolium pratense HOM05D002758 ORTHO05D002885 2.3e-06 55.8 156 30.1
THA.LOC104815531 Tarenaya hassleriana HOM05D002758 ORTHO05D002885 3.0e-06 55.5 124 36.3
AT3G15760 Arabidopsis thaliana HOM05D002758 ORTHO05D002885 3.9e-06 55.1 128 32.0
FAN09G3789 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.9e-06 55.1 103 36.9
Manes.14G132900 Manihot esculenta HOM05D002758 ORTHO05D002885 3.9e-06 55.1 139 33.8
Hund09249 Selenicereus undatus HOM05D002758 ORTHO05D002885 5.1e-06 54.7 135 35.6
Sc10g0005850 Simmondsia chinensis HOM05D002758 ORTHO05D002885 5.1e-06 54.7 138 32.6
BcaC05g28933 Brassica carinata HOM05D002758 ORTHO05D002885 6.6e-06 54.3 125 31.2
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 8.6e-06 53.9 119 34.5
Sed0027515 Sechium edule HOM05D002758 ORTHO05D002885 8.6e-06 53.9 125 36.8
Solyc06g068100.1 Solanum lycopersicum HOM05D002758 ORTHO05D002885 8.6e-06 53.9 92 42.4


User provided reference genes

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