Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 6.3e-57 223.8 105 100.0
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 5.9e-39 164.1 106 72.6
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 2.7e-23 112.1 99 57.6
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 5.9e-23 110.9 91 59.3
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.3e-22 109.8 85 61.2
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 3.8e-22 108.2 104 51.9
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.6e-20 102.8 86 57.0
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 4.7e-20 101.3 87 55.2
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 4.7e-20 101.3 92 53.3
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 4.7e-20 101.3 91 53.8
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 1.4e-19 99.8 85 57.6
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 1.8e-19 99.4 89 60.7
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 2.6e-18 95.5 89 55.1
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.8e-18 93.6 88 53.4
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 9.8e-18 93.6 86 55.8
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.2e-17 92.4 90 54.4
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.2e-17 92.4 90 54.4
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 4.8e-17 91.3 115 48.7
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 6.3e-17 90.9 96 46.9
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 8.3e-17 90.5 86 52.3
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 2.4e-16 89.0 114 42.1
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 3.1e-16 88.6 89 55.1
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 2.7e-15 85.5 81 54.3
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 3.5e-15 85.1 78 55.1
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 5.9e-15 84.3 89 51.7
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 7.7e-15 84.0 91 49.5
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 2.2e-14 82.4 97 49.5
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 2.9e-14 82.0 84 50.0
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 6.5e-14 80.9 85 50.6
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 6.5e-14 80.9 87 49.4
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 1.9e-13 79.3 89 44.9
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 1.9e-13 79.3 88 51.1
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 4.2e-13 78.2 91 46.2
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 4.2e-13 78.2 87 44.8
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.2e-13 78.2 68 52.9
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 5.5e-13 77.8 91 46.2
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.5e-13 77.8 91 46.2
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.5e-13 77.8 91 46.2
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 5.5e-13 77.8 95 50.5
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.5e-13 77.0 73 50.7
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 9.5e-13 77.0 87 48.3
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 9.5e-13 77.0 91 45.1
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 9.5e-13 77.0 59 66.1
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 9.5e-13 77.0 88 48.9
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.7e-12 75.5 84 50.0
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 4.7e-12 74.7 85 47.1
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.0e-11 73.6 87 46.0
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.4e-11 73.2 84 48.8
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.3e-11 72.4 84 48.8
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 3.0e-11 72.0 88 47.7
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 4.0e-11 71.6 88 44.3
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 5.2e-11 71.2 100 47.0
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 1.5e-10 69.7 91 44.0
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 2.6e-10 68.9 91 42.9
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.6e-10 68.9 101 37.6
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.6e-10 68.9 101 37.6
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 2.6e-10 68.9 87 43.7
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 4.4e-10 68.2 96 50.0
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 4.4e-10 68.2 90 45.6
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 5.7e-10 67.8 62 56.5
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.5e-10 67.4 92 39.1
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 9.8e-10 67.0 74 47.3
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 2.8e-09 65.5 91 46.2
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 3.7e-09 65.1 77 44.2
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 6.3e-09 64.3 98 44.9
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 8.3e-09 63.9 87 41.4
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 8.3e-09 63.9 87 41.4
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 8.3e-09 63.9 71 49.3
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 1.1e-08 63.5 91 36.3
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 2.4e-08 62.4 59 50.8
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 3.1e-08 62.0 47 63.8
SEGI_37168 Sequoiadendron giganteum HOM05D007970 ORTHO05D009943 3.1e-08 62.0 66 48.5
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 4.1e-08 61.6 94 43.6
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 4.1e-08 61.6 65 44.6
Prupe.6G139500 Prunus persica HOM05D021165 ORTHO05D006261 4.1e-08 61.6 61 54.1
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 5.4e-08 61.2 64 48.4
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 9.2e-08 60.5 71 42.3
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.2e-07 60.1 66 45.5
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 1.6e-07 59.7 65 50.8
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 1.6e-07 59.7 85 38.8
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.0e-07 59.3 63 47.6
unitig_578.g16361 Utricularia gibba HOM05D006872 ORTHO05D006261 2.7e-07 58.9 98 41.8
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 3.5e-07 58.5 82 39.0
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 3.5e-07 58.5 91 38.5
Sed0014477 Sechium edule HOM05D006872 ORTHO05D006261 3.5e-07 58.5 78 39.7
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 3.5e-07 58.5 65 49.2
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 4.5e-07 58.2 74 45.9
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 4.5e-07 58.2 83 39.8
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 4.5e-07 58.2 79 38.0
MSTRG.26609 Avicennia marina HOM05D006872 ORTHO05D006261 7.7e-07 57.4 99 36.4
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.7e-07 57.4 87 41.4
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 7.7e-07 57.4 87 41.4
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 1.0e-06 57.0 92 42.4
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.0e-06 57.0 105 35.2
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 1.3e-06 56.6 66 47.0
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 1.3e-06 56.6 68 42.6
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 1.3e-06 56.6 68 42.6
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 1.3e-06 56.6 68 42.6
Psat3g030200 Pisum sativum HOM05D006872 ORTHO05D006261 1.3e-06 56.6 91 34.1
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 1.7e-06 56.2 65 47.7
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 1.7e-06 56.2 64 46.9
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 1.7e-06 56.2 64 46.9
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 2.3e-06 55.8 82 35.4
Sed0018559 Sechium edule HOM05D006872 ORTHO05D006261 2.3e-06 55.8 81 40.7
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 2.9e-06 55.5 67 47.8
CiPaw.09G018900 Carya illinoinensis HOM05D006872 ORTHO05D006261 2.9e-06 55.5 66 43.9
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 2.9e-06 55.5 67 47.8
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 3.8e-06 55.1 65 41.5
MELO3C024577.2 Cucumis melo HOM05D006872 ORTHO05D006261 3.8e-06 55.1 79 45.6
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 3.8e-06 55.1 65 50.8
QL07p037475 Quercus lobata HOM05D006872 ORTHO05D006261 3.8e-06 55.1 66 45.5
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 3.8e-06 55.1 78 39.7
ATR0772G099 Amborella trichopoda HOM05D006872 ORTHO05D006261 5.0e-06 54.7 65 43.1
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 5.0e-06 54.7 73 41.1
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 5.0e-06 54.7 70 42.9
Glyma.19G198100 Glycine max HOM05D006872 ORTHO05D006261 5.0e-06 54.7 70 42.9
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 5.0e-06 54.7 64 45.3
CsaV3_6G040990 Cucumis sativus L. HOM05D006872 ORTHO05D006261 6.6e-06 54.3 81 44.4
CiPaw.13G131800 Carya illinoinensis HOM05D006872 ORTHO05D006261 8.6e-06 53.9 48 60.4
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 8.6e-06 53.9 72 41.7
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 8.6e-06 53.9 71 43.7


User provided reference genes

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