Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045074.1 Olea europaea HOM05D000049 ORTHO05D291645 8.1e-31 136.3 65 100.0
Oeu042403.1 Olea europaea HOM05D000049 ORTHO05D000027 1.9e-08 62.0 71 56.3
Aqoxy5G01620 Aquilegia oxysepala HOM05D000049 ORTHO05D000027 1.6e-07 58.9 71 53.5
CANSAT54G0966 Cannabis sativa HOM05D000049 ORTHO05D000027 1.6e-07 58.9 71 52.1
CAN.G700.20 Capsicum annuum HOM05D000049 ORTHO05D000027 1.6e-07 58.9 71 53.5
ClCG01G019550 Citrullus lanatus HOM05D000049 ORTHO05D000027 1.6e-07 58.9 71 53.5
MELO3C007829.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.6e-07 58.9 71 53.5
HPP92_027717 Vanilla planifolia HOM05D000049 ORTHO05D000027 1.6e-07 58.9 71 53.5
Zm00001eb052220 Zea mays HOM05D000049 ORTHO05D000027 2.2e-07 58.5 71 53.5
Aa31LG8G15640 Aethionema arabicum HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 53.5
DCAR_017292 Daucus carota HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 52.1
Thhalv10022871m.g Eutrema salsugineum HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 53.5
Lj1g0019429 Lotus japonicus HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 53.5
LjContig00448g0006848 Lotus japonicus HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 53.5
Os02g0327100 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 52.1
THA.LOC104819787 Tarenaya hassleriana HOM05D000049 ORTHO05D000027 2.8e-07 58.2 71 53.5
arahy.Tifrunner.gnm1.ann1.RR0NEL Arachis hypogaea HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
CAN.G33.7 Capsicum annuum HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
CsaV3_6G046260 Cucumis sativus L. HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Eucgr.D02615 Eucalyptus grandis HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Glyma.01G176300 Glycine max HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Glyma.11G068500 Glycine max HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Lalb_Chr09g0333501 Lupinus albus HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Nitab4.5_0000053g0130 Nicotiana tabacum HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
PSO017G0329 Papaver somniferum HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 52.1
PSO675G6496 Papaver somniferum HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 52.1
Peaxi162Scf00889g00110 Petunia axillaris HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Phvul.002G030600 Phaseolus vulgaris HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
QL06p046218 Quercus lobata HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Sc03g0002990 Simmondsia chinensis HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 52.1
Solyc07g014650.3 Solanum lycopersicum HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
Sopen07g005510 Solanum pennellii HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 53.5
GSVIVG01018953001 Vitis vinifera HOM05D000049 ORTHO05D000027 3.7e-07 57.8 71 52.1
CiPaw.01G039600 Carya illinoinensis HOM05D000049 ORTHO05D000027 4.8e-07 57.4 71 52.1
Medtr8g077540 Medicago truncatula HOM05D000049 ORTHO05D000027 4.8e-07 57.4 71 52.1
PGR119G0481 Punica granatum HOM05D000049 ORTHO05D000027 4.8e-07 57.4 71 52.1
AUR62004056 Chenopodium quinoa HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
Dinv39989 Davidia involucrata HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
Gohir.A02G165900 Gossypium hirsutum HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
Gorai.003G014400 Gossypium raimondii HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
Potri.007G024800 Populus trichocarpa HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
Sabra07G0021900 Salix brachista HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
Sp3g31800 Schrenkiella parvula HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
SpUn0030_0030 Schrenkiella parvula HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 52.1
VMungo1215G1137 Vigna mungo HOM05D000049 ORTHO05D000027 6.3e-07 57.0 71 53.5
Atru.chr12.876 Acer truncatum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Atru.chr3.581 Acer truncatum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
ATR0916G006 Amborella trichopoda HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 50.7
AL3G51670 Arabidopsis lyrata HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 53.5
AT2G18390 Arabidopsis thaliana HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 53.5
Carub.0003s3254 Capsella rubella HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 53.5
CARHR108990 Cardamine hirsuta HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 53.5
Ca_22270_v3 Cicer arietinum L. HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Ca_22283_v3 Cicer arietinum L. HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
COL.COLO4_24893 Corchorus olitorius HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Duzib187G0891 Durio zibethinus HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
ECA232G2840 Erigeron canadensis HOM05D004035 ORTHO05D004631 8.2e-07 56.6 71 52.1
Gohir.A04G080200 Gossypium hirsutum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Gohir.A06G179900 Gossypium hirsutum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Gohir.A08G117650 Gossypium hirsutum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Gohir.A11G184201 Gossypium hirsutum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Gohir.D11G190700 Gossypium hirsutum HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Gorai.007G203200 Gossypium raimondii HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
HanXRQChr09g0261491 Helianthus annuus HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Lsat_1_v5_gn_4_152040 Lactuca sativa HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Manes.01G141100 Manihot esculenta HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 52.1
Sed0013382 Sechium edule HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 53.5
Hund20734 Selenicereus undatus HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 50.7
TWI09G0572 Tripterygium wilfordii HOM05D000049 ORTHO05D000027 8.2e-07 56.6 71 53.5
Migut.H00987 Erythranthe guttata HOM05D000049 ORTHO05D000027 1.1e-06 56.2 71 52.1
Rhsim08G0117800 Rhododendron simsii HOM05D000049 ORTHO05D000027 1.1e-06 56.2 71 52.1
SGA_v2.0_scaffold614G53204 Striga asiatica HOM05D000049 ORTHO05D000027 1.1e-06 56.2 71 52.1
Thecc.01G034800 Theobroma cacao HOM05D000049 ORTHO05D000027 1.1e-06 56.2 71 50.7
EL10Ac6g15558 Beta vulgaris HOM05D000049 ORTHO05D000027 1.4e-06 55.8 71 52.1
EL10Ac7g16258 Beta vulgaris HOM05D000049 ORTHO05D000027 1.4e-06 55.8 71 52.1
Cfa004414 Carpinus fangiana HOM05D000049 ORTHO05D000027 1.4e-06 55.8 71 52.1
Haze_25324 Corylus avellana HOM05D000049 ORTHO05D000027 1.4e-06 55.8 71 52.1
Manes.02G099400 Manihot esculenta HOM05D000049 ORTHO05D000027 1.4e-06 55.8 71 50.7
vmacro17827 Vaccinium macrocarpon HOM05D000049 ORTHO05D000027 1.4e-06 55.8 71 52.1
arahy.Tifrunner.gnm1.ann1.4F14CM Arachis hypogaea HOM05D000049 ORTHO05D000027 1.8e-06 55.5 70 52.9
BcaB08g34819 Brassica carinata HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
BcaC01g06894 Brassica carinata HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
BcaC06g36405 Brassica carinata HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
C07p04470 Brassica napus HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
BolC3t18177H Brassica oleracea HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
BolC7t40842H Brassica oleracea HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
BraA06t26255Z Brassica rapa HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
BraA07t28026Z Brassica rapa HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
CSS0005450 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
Cc03_g11540 Coffea canephora HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 52.1
Gohir.D03G014100 Gossypium hirsutum HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 50.7
Hma1.2p1_0400F.1_g144370 Hydrangea macrophylla HOM05D000049 ORTHO05D000027 1.8e-06 55.5 71 50.7
Lj4A201T51 Lonicera japonica HOM05D000049 ORTHO05D000027 2.4e-06 55.1 71 50.7
Cfa009642 Carpinus fangiana HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 50.7
FvH4_5g39540 Fragaria vesca HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 49.3
FAN04G0739 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 49.3
FAN08G3444 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 49.3
FAN18G4380 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 49.3
Gohir.A02G014800 Gossypium hirsutum HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 50.7
RcHm_v2.0_Chr7g0241851 Rosa chinensis HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 49.3
SalBow1G0952 Salvia bowleyana HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 49.3
SEGI_00520 Sequoiadendron giganteum HOM05D000049 ORTHO05D000027 3.1e-06 54.7 71 50.7
Psat3g040480 Pisum sativum HOM05D000049 ORTHO05D000027 4.1e-06 54.3 66 53.0
CDE07G1378 Ceratophyllum demersum HOM05D000049 ORTHO05D000027 5.3e-06 53.9 71 45.1
MD03G1270500 Malus domestica HOM05D000049 ORTHO05D000027 5.3e-06 53.9 71 50.7
Prupe.5G036300 Prunus persica HOM05D000049 ORTHO05D000027 5.3e-06 53.9 66 51.5
TAR625G0429 Trochodendron aralioides HOM05D000049 ORTHO05D000027 5.3e-06 53.9 71 50.7
Nn1g04974 Nelumbo nucifera HOM05D000049 ORTHO05D000027 6.9e-06 53.5 68 51.5
TAR381G0235 Trochodendron aralioides HOM05D000049 ORTHO05D000027 9.0e-06 53.1 71 49.3


User provided reference genes

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