Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 5.9e-106 387.5 189 100.0
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.3e-49 200.3 197 59.9
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 1.7e-49 199.9 189 57.1
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.1e-48 197.2 197 58.4
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.5e-48 196.8 183 62.8
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 2.5e-48 196.1 179 62.0
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 2.0e-45 186.4 192 55.7
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 1.7e-44 183.3 154 63.6
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 2.9e-44 182.6 194 51.5
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 2.7e-42 176.0 199 53.3
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 4.6e-42 175.3 146 62.3
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 4.6e-42 175.3 146 62.3
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.7e-41 173.3 173 57.2
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.7e-41 173.3 173 55.5
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 1.7e-41 173.3 184 52.7
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 2.3e-41 172.9 192 55.2
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.3e-41 172.9 137 62.8
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 3.0e-41 172.6 193 56.5
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.0e-41 172.6 168 56.5
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 3.9e-41 172.2 169 58.6
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 6.6e-41 171.4 167 54.5
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 6.6e-41 171.4 148 60.8
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 6.6e-41 171.4 148 60.8
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 1.1e-40 170.6 106 74.5
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 1.9e-40 169.9 95 82.1
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 3.3e-40 169.1 171 55.0
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 3.3e-40 169.1 107 76.6
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 7.3e-40 167.9 149 59.7
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 1.2e-39 167.2 106 76.4
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 1.6e-39 166.8 98 79.6
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.6e-39 166.8 90 85.6
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.1e-39 166.4 185 52.4
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 2.1e-39 166.4 170 56.5
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 2.8e-39 166.0 152 56.6
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 2.8e-39 166.0 141 61.7
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 3.6e-39 165.6 158 58.9
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 3.6e-39 165.6 187 54.5
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.7e-39 165.2 152 55.9
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.7e-39 165.2 150 61.3
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 6.2e-39 164.9 109 77.1
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 6.2e-39 164.9 106 69.8
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 1.4e-38 163.7 128 65.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.8e-38 163.3 91 82.4
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.8e-38 163.3 107 72.9
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 2.4e-38 162.9 142 64.1
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 2.4e-38 162.9 107 72.0
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 3.1e-38 162.5 143 62.9
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 3.1e-38 162.5 112 71.4
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.0e-38 162.2 91 80.2
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 4.0e-38 162.2 105 73.3
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 5.3e-38 161.8 159 52.2
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 5.3e-38 161.8 159 52.2
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 5.3e-38 161.8 174 53.4
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 6.9e-38 161.4 107 74.8
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 9.0e-38 161.0 168 55.4
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 9.0e-38 161.0 109 75.2
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 9.0e-38 161.0 107 74.8
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 9.0e-38 161.0 107 74.8
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 1.2e-37 160.6 91 82.4
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 1.5e-37 160.2 152 57.2
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 1.5e-37 160.2 167 54.5
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 1.5e-37 160.2 103 73.8
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 2.0e-37 159.8 152 57.2
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 2.0e-37 159.8 118 72.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 2.0e-37 159.8 161 57.1
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 3.4e-37 159.1 89 84.3
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 4.4e-37 158.7 102 75.5
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.3e-36 157.1 154 57.8
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 1.7e-36 156.8 120 65.0
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 1.7e-36 156.8 120 65.0
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 2.9e-36 156.0 151 58.3
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 4.9e-36 155.2 89 82.0
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 6.4e-36 154.8 97 73.2
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 1.1e-35 154.1 109 71.6
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 7.1e-35 151.4 114 66.7
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 9.3e-35 151.0 166 53.6
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 9.3e-35 151.0 153 54.9
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.2e-34 150.6 192 45.3
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 2.1e-34 149.8 95 73.7
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 2.7e-34 149.4 124 60.5
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 3.5e-34 149.1 132 61.4
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 4.6e-34 148.7 95 75.8
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.3e-33 147.1 132 60.6
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 3.0e-33 146.0 184 48.4
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 5.1e-33 145.2 162 53.7
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.5e-32 143.7 89 74.2
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 2.5e-32 142.9 93 72.0
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.6e-31 140.2 94 71.3
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 2.8e-31 139.4 101 65.3
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 3.6e-31 139.0 101 64.4
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.4e-30 137.1 108 64.8
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.4e-30 137.1 167 53.3
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.5e-29 133.7 89 69.7
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 5.8e-29 131.7 91 69.2
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 1.7e-28 130.2 130 53.8
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 8.4e-28 127.9 81 72.8
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 8.4e-28 127.9 81 72.8
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.4e-27 127.1 100 63.0
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 1.9e-27 126.7 104 56.7
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 4.2e-27 125.6 91 64.8
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 2.1e-26 123.2 104 61.5
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 3.5e-26 122.5 91 64.8
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.6e-26 122.1 108 57.4
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.5e-24 116.3 73 71.2
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 1.5e-21 107.1 97 57.7
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.6e-21 106.3 106 50.0
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 4.5e-21 105.5 91 53.8
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 3.8e-20 102.4 129 48.8
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 6.4e-20 101.7 87 56.3
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.4e-19 100.5 178 42.7
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 5.5e-19 98.6 95 58.9
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.1e-18 96.7 101 47.5
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.5e-16 90.5 87 47.1
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.8e-12 75.9 108 43.5
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.8e-12 75.9 108 43.5
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.1e-10 70.1 93 38.7
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 4.6e-10 68.9 40 80.0
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 8.7e-09 64.7 49 65.3
VMungo1215G2316 Vigna mungo HOM05D017790 ORTHO05D002759 3.1e-06 56.2 32 71.9


User provided reference genes

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