Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 2.1e-163 578.9 290 100.0
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.1e-116 423.7 295 75.3
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 7.2e-87 324.7 301 59.1
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 9.4e-87 324.3 308 58.8
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 8.8e-85 317.8 300 60.0
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 4.5e-81 305.4 326 55.5
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 3.0e-77 292.7 301 55.8
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 1.4e-74 283.9 253 61.3
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.3e-72 277.3 290 54.5
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 1.3e-72 277.3 289 55.0
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 1.7e-72 276.9 203 67.0
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 2.9e-72 276.2 290 54.5
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 3.8e-72 275.8 199 69.3
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 6.5e-72 275.0 284 53.5
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 1.1e-71 274.2 217 65.0
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.5e-71 273.1 289 54.7
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 4.2e-71 272.3 200 67.5
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 7.2e-71 271.6 203 65.5
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 9.4e-71 271.2 297 52.5
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 1.6e-70 270.4 200 67.0
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 2.7e-70 269.6 246 57.3
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 2.7e-70 269.6 205 67.3
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 4.7e-70 268.9 217 64.1
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 6.1e-70 268.5 217 64.1
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 6.1e-70 268.5 296 53.4
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.0e-69 267.7 203 65.5
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 1.4e-69 267.3 293 52.9
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 1.8e-69 266.9 205 66.8
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 5.2e-69 265.4 224 62.1
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 5.2e-69 265.4 291 51.9
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 8.8e-69 264.6 292 51.7
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 1.2e-68 264.2 203 65.5
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.0e-68 263.5 203 64.5
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 5.7e-68 261.9 269 52.8
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 9.8e-68 261.2 203 65.0
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.2e-67 260.0 204 63.7
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 3.7e-67 259.2 267 55.1
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 3.7e-67 259.2 207 63.3
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 4.8e-67 258.8 204 61.8
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 4.8e-67 258.8 290 52.1
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 6.3e-67 258.5 218 61.0
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 6.3e-67 258.5 210 61.4
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 1.1e-66 257.7 215 61.9
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 1.4e-66 257.3 204 59.8
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 4.1e-66 255.8 243 55.6
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 5.4e-66 255.4 281 50.9
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 7.0e-66 255.0 223 60.5
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 7.0e-66 255.0 202 62.9
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 9.1e-66 254.6 283 50.2
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 2.0e-65 253.4 212 60.4
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 2.0e-65 253.4 239 55.6
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.5e-65 252.7 178 69.7
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 5.9e-65 251.9 203 60.6
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 7.7e-65 251.5 301 50.8
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 1.0e-64 251.1 203 59.6
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 1.3e-64 250.8 210 59.0
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 5.0e-64 248.8 203 60.1
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 5.0e-64 248.8 290 50.3
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 8.5e-64 248.1 206 63.6
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 1.1e-63 247.7 291 49.8
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 1.9e-63 246.9 215 60.0
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 4.2e-63 245.7 202 60.9
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 4.2e-63 245.7 295 51.2
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 7.2e-63 245.0 205 61.5
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 7.2e-63 245.0 209 59.3
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 7.2e-63 245.0 203 60.1
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 1.6e-62 243.8 202 61.9
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 2.8e-62 243.0 192 63.0
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 1.4e-61 240.7 203 61.6
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 3.0e-61 239.6 199 59.8
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 3.0e-61 239.6 306 49.3
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 8.8e-61 238.0 205 58.5
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 1.5e-60 237.3 202 60.4
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 4.4e-60 235.7 203 58.1
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 2.8e-59 233.0 205 57.6
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 3.7e-59 232.6 213 57.7
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 3.1e-58 229.6 198 59.1
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 3.1e-58 229.6 214 55.1
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 3.1e-58 229.6 206 55.3
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 7.0e-58 228.4 206 54.4
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 1.2e-57 227.6 192 56.2
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 1.6e-57 227.3 191 58.1
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 2.7e-57 226.5 205 59.0
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 4.5e-57 225.7 204 56.4
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 5.9e-57 225.3 204 56.9
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 1.0e-56 224.6 205 55.6
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.5e-55 219.9 174 67.2
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 2.5e-55 219.9 199 56.8
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 4.3e-55 219.2 203 56.7
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 6.8e-53 211.8 312 41.3
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 2.6e-52 209.9 154 69.5
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 1.7e-51 207.2 194 58.8
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 4.1e-50 202.6 167 59.3
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 5.4e-50 202.2 151 66.2
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 1.0e-48 198.0 192 52.1
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 1.9e-47 193.7 153 66.7
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 7.3e-47 191.8 143 69.9
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.1e-46 190.3 143 67.1
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 4.7e-46 189.1 203 49.3
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.0e-45 188.0 157 60.5
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 2.3e-45 186.8 177 57.1
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 4.0e-45 186.0 167 56.3
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 2.9e-43 179.9 182 52.2
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 4.9e-43 179.1 213 47.9
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.4e-42 177.6 141 61.7
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 2.4e-42 176.8 207 45.9
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 4.6e-41 172.6 205 47.3
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 3.9e-40 169.5 134 61.9
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 2.4e-34 150.2 113 67.3
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 5.1e-32 142.5 203 41.9
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 9.5e-31 138.3 154 50.0
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 1.4e-29 134.4 199 39.2
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 7.8e-25 118.6 113 57.5
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 9.6e-23 111.7 141 41.8
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 6.4e-19 99.0 81 65.4
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.9e-18 97.4 179 35.2
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.9e-18 97.4 179 35.2
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 2.3e-16 90.5 100 52.0
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 3.9e-16 89.7 123 38.2
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 2.1e-14 84.0 223 30.9
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 4.5e-12 76.3 139 33.8
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 3.8e-11 73.2 136 41.2
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 5.4e-10 69.3 103 42.7
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 1.6e-09 67.8 219 27.4
SalBow1G6520 Salvia bowleyana HOM05D001890 ORTHO05D008163 3.5e-09 66.6 66 51.5


User provided reference genes

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