Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 6.5e-54 213.8 105 100.0
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 1.7e-33 146.0 84 84.5
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 1.1e-32 143.3 89 82.0
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 3.1e-32 141.7 93 75.3
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 1.2e-31 139.8 93 77.4
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 1.6e-31 139.4 83 81.9
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 1.6e-31 139.4 88 79.5
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 5.9e-31 137.5 89 77.5
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 5.9e-31 137.5 90 75.6
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 1.3e-30 136.3 92 73.9
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 1.7e-30 136.0 100 69.0
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 2.2e-30 135.6 90 73.3
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 2.9e-30 135.2 90 74.4
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 2.9e-30 135.2 96 69.8
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 2.9e-30 135.2 96 69.8
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 2.9e-30 135.2 90 76.7
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 5.0e-30 134.4 104 65.4
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 5.0e-30 134.4 78 80.8
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 5.0e-30 134.4 90 72.2
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 8.5e-30 133.7 91 71.4
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.1e-29 133.3 90 71.1
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 1.1e-29 133.3 87 74.7
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.1e-29 133.3 80 76.2
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 1.5e-29 132.9 88 75.0
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 1.5e-29 132.9 91 71.4
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 1.5e-29 132.9 92 73.9
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.9e-29 132.5 90 71.1
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.9e-29 132.5 90 71.1
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 1.9e-29 132.5 87 75.9
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 1.9e-29 132.5 90 73.3
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 1.9e-29 132.5 88 76.1
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 1.9e-29 132.5 85 75.3
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 4.2e-29 131.3 92 73.9
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 4.2e-29 131.3 90 72.2
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 5.5e-29 131.0 77 77.9
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 7.2e-29 130.6 83 74.7
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 9.4e-29 130.2 88 73.9
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 9.4e-29 130.2 95 65.3
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 1.2e-28 129.8 90 68.9
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 1.2e-28 129.8 95 66.3
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 1.2e-28 129.8 95 66.3
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 1.6e-28 129.4 86 74.4
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 1.6e-28 129.4 86 74.4
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 1.6e-28 129.4 90 74.4
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 1.6e-28 129.4 94 70.2
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 1.6e-28 129.4 80 80.0
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 2.1e-28 129.0 101 60.4
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 2.1e-28 129.0 80 80.0
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 2.1e-28 129.0 87 74.7
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 2.1e-28 129.0 92 67.4
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 2.1e-28 129.0 93 65.6
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 2.1e-28 129.0 96 66.7
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 2.1e-28 129.0 87 73.6
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 2.7e-28 128.6 80 80.0
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 2.7e-28 128.6 81 75.3
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 2.7e-28 128.6 80 75.0
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 3.6e-28 128.3 101 60.4
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 4.7e-28 127.9 92 65.2
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 4.7e-28 127.9 91 68.1
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 4.7e-28 127.9 90 72.2
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 4.7e-28 127.9 84 76.2
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 6.1e-28 127.5 97 67.0
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 8.0e-28 127.1 84 69.0
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 1.8e-27 125.9 88 70.5
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 2.3e-27 125.6 101 65.3
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 2.3e-27 125.6 95 65.3
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.3e-27 125.6 93 67.7
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 2.3e-27 125.6 93 67.7
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 2.3e-27 125.6 75 81.3
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 2.3e-27 125.6 80 72.5
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 3.0e-27 125.2 85 72.9
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 4.0e-27 124.8 82 69.5
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 4.0e-27 124.8 81 74.1
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 5.2e-27 124.4 89 67.4
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 6.7e-27 124.0 97 63.9
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 6.7e-27 124.0 85 71.8
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 8.8e-27 123.6 78 78.2
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 1.1e-26 123.2 93 68.8
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 1.1e-26 123.2 92 65.2
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 1.1e-26 123.2 84 69.0
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 2.0e-26 122.5 93 66.7
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 2.0e-26 122.5 72 75.0
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 2.0e-26 122.5 72 75.0
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 2.0e-26 122.5 92 64.1
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 2.6e-26 122.1 98 67.3
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 3.3e-26 121.7 85 74.1
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 5.7e-26 120.9 76 71.1
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 5.7e-26 120.9 82 73.2
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 7.5e-26 120.6 92 64.1
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 7.5e-26 120.6 75 74.7
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 9.7e-26 120.2 92 65.2
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 9.7e-26 120.2 71 76.1
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 9.7e-26 120.2 92 64.1
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 1.7e-25 119.4 90 67.8
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 2.2e-25 119.0 76 71.1
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 2.2e-25 119.0 78 76.9
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 4.8e-25 117.9 85 70.6
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 4.8e-25 117.9 74 73.0
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 8.2e-25 117.1 72 72.2
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 8.2e-25 117.1 72 72.2
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 8.2e-25 117.1 90 67.8
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 8.2e-25 117.1 98 62.2
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 1.1e-24 116.7 80 72.5
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 1.1e-24 116.7 100 60.0
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 1.8e-24 115.9 79 69.6
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 3.1e-24 115.2 85 67.1
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 3.1e-24 115.2 99 59.6
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 3.1e-24 115.2 99 59.6
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 3.1e-24 115.2 86 60.5
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 4.1e-24 114.8 78 71.8
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 4.1e-24 114.8 78 71.8
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 4.1e-24 114.8 101 61.4
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 7.0e-24 114.0 80 70.0
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 7.0e-24 114.0 68 80.9
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 1.2e-23 113.2 65 80.0
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 1.6e-23 112.8 70 75.7
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 2.7e-23 112.1 79 67.1
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 3.5e-23 111.7 85 63.5
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 4.5e-23 111.3 75 73.3
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 4.5e-23 111.3 79 69.6
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 5.9e-23 110.9 93 59.1
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 7.7e-23 110.5 65 78.5
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 7.7e-23 110.5 84 65.5
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 1.0e-22 110.2 78 66.7
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 1.3e-22 109.8 78 69.2
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 1.3e-22 109.8 83 62.7
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 1.3e-22 109.8 82 68.3
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 2.9e-22 108.6 90 63.3
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 2.9e-22 108.6 65 78.5
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 2.9e-22 108.6 102 53.9
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 3.8e-22 108.2 82 67.1
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 8.5e-22 107.1 90 63.3
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 3.2e-21 105.1 81 65.4
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 5.5e-21 104.4 70 70.0
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 2.3e-19 99.0 76 57.9
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 3.0e-19 98.6 85 60.0
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.0e-19 98.2 72 66.7
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 1.5e-18 96.3 84 54.8
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.5e-18 96.3 72 65.3
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 5.7e-18 94.4 70 62.9
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 5.7e-18 94.4 70 62.9
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 1.1e-16 90.1 74 58.1
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 1.8e-16 89.4 85 52.9
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 3.1e-16 88.6 65 60.0
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 3.1e-16 88.6 63 68.3
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 5.4e-16 87.8 59 71.2
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.0e-15 85.9 57 70.2
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 2.7e-15 85.5 75 54.7
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 3.5e-15 85.1 101 47.5
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 5.0e-14 81.3 114 42.1
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 5.0e-14 81.3 63 63.5
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 5.7e-10 67.8 63 44.4
Gorai.013G138000 Gossypium raimondii HOM05D004571 ORTHO05D005334 2.8e-09 65.5 42 69.0
TWI23G0269 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 8.3e-09 63.9 48 68.8
PRCOL_00006286 Prasinoderma coloniale HOM05D004571 ORTHO05D005334 3.1e-08 62.0 60 48.3
BcaC06g34972 Brassica carinata HOM05D004571 ORTHO05D005334 3.5e-07 58.5 41 65.9
GSVIVG01015950001 Vitis vinifera HOM05D004571 ORTHO05D005334 2.9e-06 55.5 44 61.4
Cre12.g515150 Chlamydomonas reinhardtii HOM05D004571 ORTHO05D005334 8.6e-06 53.9 81 37.0


User provided reference genes

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