Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 8.0e-236 820.1 424 100.0
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 9.0e-147 524.2 337 80.4
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 1.1e-104 384.4 440 51.4
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 7.3e-88 328.6 432 46.5
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 3.4e-85 319.7 430 45.6
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 3.7e-84 316.2 428 44.2
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 4.1e-83 312.8 419 45.3
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.1e-82 310.5 439 47.6
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.3e-81 307.8 424 45.0
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 2.5e-80 303.5 446 44.2
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 6.8e-78 295.4 428 43.2
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 8.9e-78 295.0 411 43.8
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 2.6e-77 293.5 430 43.5
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.3e-76 291.2 428 43.2
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 3.7e-76 289.7 432 42.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 7.8e-74 282.0 448 41.7
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 5.6e-72 275.8 428 41.6
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 8.1e-71 271.9 419 41.5
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.1e-70 271.6 437 41.0
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 2.4e-70 270.4 436 40.4
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 6.8e-70 268.9 430 42.3
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.2e-68 263.8 419 41.1
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 7.8e-66 255.4 496 36.5
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.9e-65 253.1 411 40.9
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 6.6e-65 252.3 434 38.5
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 1.9e-64 250.8 428 40.7
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.6e-63 246.5 434 40.1
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 8.1e-63 245.4 436 38.1
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.8e-62 244.2 428 40.0
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 2.4e-62 243.8 334 45.2
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 4.0e-62 243.0 433 42.3
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.0e-61 240.7 408 41.7
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 9.9e-61 238.4 439 40.8
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 9.9e-61 238.4 431 39.4
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 9.9e-61 238.4 423 39.7
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.7e-60 237.7 429 38.7
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 1.7e-60 237.7 445 35.7
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.2e-60 237.3 428 39.7
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 3.8e-60 236.5 428 39.7
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.4e-59 234.6 428 38.8
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.2e-59 233.4 428 39.5
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 5.4e-59 232.6 429 36.6
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.6e-58 231.1 463 34.3
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 3.5e-58 229.9 467 36.6
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 3.0e-57 226.9 436 35.6
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 3.9e-57 226.5 433 36.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 7.3e-56 222.2 431 36.7
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 9.6e-56 221.9 416 36.3
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 4.8e-55 219.5 433 36.0
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 8.1e-55 218.8 451 37.7
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 8.1e-55 218.8 432 36.3
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 1.1e-54 218.4 304 44.7
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.2e-53 214.9 348 42.5
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 2.0e-53 214.2 438 35.4
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 2.6e-53 213.8 403 35.5
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 5.8e-53 212.6 327 44.6
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 4.9e-52 209.5 459 35.1
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.4e-51 208.0 432 35.6
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 7.1e-51 205.7 237 50.2
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 3.9e-49 199.9 390 36.9
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 8.7e-49 198.7 425 35.1
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.9e-48 197.6 170 58.8
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.1e-46 191.8 217 49.3
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.8e-46 191.0 393 36.9
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.5e-45 188.0 428 34.8
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 3.4e-45 186.8 308 41.6
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 3.4e-45 186.8 494 32.8
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 1.3e-44 184.9 172 54.7
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.4e-43 181.4 410 37.6
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.3e-41 174.1 384 34.1
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 6.7e-41 172.6 493 30.2
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.3e-38 162.9 350 33.7
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 6.9e-38 162.5 403 33.0
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.5e-37 161.4 331 36.9
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 6.5e-36 156.0 411 32.4
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.1e-35 152.5 129 62.0
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 4.6e-34 149.8 310 34.8
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 4.8e-31 139.8 369 31.2
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 6.3e-31 139.4 336 31.8
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 4.1e-30 136.7 93 68.8
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 2.0e-29 134.4 151 49.7
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.3e-28 131.7 351 30.8
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 7.7e-21 105.9 162 43.2
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.9e-19 101.3 403 28.8
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 6.1e-18 96.3 153 35.9
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 1.7e-15 88.2 75 54.7
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.6e-13 80.9 251 29.9
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.7e-12 78.2 249 30.5
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 3.8e-12 77.0 333 27.6
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 1.0e-09 68.9 83 47.0
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.0e-09 67.4 235 28.5
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 4.4e-08 63.5 56 60.7
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 3.7e-07 60.5 172 29.7
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 8.2e-07 59.3 51 56.9


User provided reference genes

Program Settings