Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.3e-69 265.4 130 100.0
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 9.2e-50 200.3 130 74.6
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.0e-49 199.1 133 73.7
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 2.5e-47 192.2 130 70.8
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 9.5e-47 190.3 125 73.6
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.6e-46 189.5 130 72.3
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.8e-46 188.7 130 72.3
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 4.7e-46 188.0 120 75.0
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 6.1e-46 187.6 131 70.2
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.0e-45 186.8 120 74.2
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.8e-45 186.0 130 71.5
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 5.2e-45 184.5 129 65.9
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 6.8e-45 184.1 122 72.1
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 8.9e-45 183.7 122 71.3
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 8.9e-45 183.7 135 68.1
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.0e-44 182.6 122 73.0
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 2.0e-44 182.6 122 72.1
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 3.4e-44 181.8 130 66.2
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.3e-43 179.9 122 68.9
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.3e-43 179.9 130 66.9
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.7e-43 179.5 120 71.7
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.7e-43 179.5 122 70.5
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 2.9e-43 178.7 120 71.7
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.1e-42 176.8 118 71.2
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 2.4e-42 175.6 130 66.2
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.2e-41 173.3 122 68.0
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.2e-41 173.3 118 69.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.2e-41 173.3 119 68.9
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 1.6e-41 172.9 122 66.4
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 2.0e-41 172.6 119 68.9
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 2.7e-41 172.2 121 66.1
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 3.5e-41 171.8 120 68.3
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.0e-41 171.0 122 67.2
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 6.0e-41 171.0 118 72.0
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 7.8e-41 170.6 120 68.3
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.3e-40 169.9 118 68.6
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.7e-40 169.5 118 68.6
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.7e-40 169.5 109 72.5
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.3e-40 169.1 130 64.6
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 2.3e-40 169.1 120 65.0
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 3.0e-40 168.7 120 66.7
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 5.0e-40 167.9 123 61.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 6.6e-40 167.5 128 63.3
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 6.6e-40 167.5 118 69.5
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 6.6e-40 167.5 119 67.2
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 6.6e-40 167.5 120 66.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 8.6e-40 167.2 117 66.7
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 8.6e-40 167.2 121 68.6
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.1e-39 166.8 122 67.2
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.9e-39 166.0 120 66.7
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 1.9e-39 166.0 119 65.5
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 3.3e-39 165.2 123 60.2
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 5.6e-39 164.5 111 71.2
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 7.3e-39 164.1 120 64.2
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.2e-38 163.3 122 59.8
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.6e-38 162.9 121 63.6
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.6e-38 162.9 121 61.2
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 2.1e-38 162.5 119 59.7
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 2.1e-38 162.5 119 59.7
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.1e-38 162.5 119 61.3
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 2.8e-38 162.2 121 58.7
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 2.8e-38 162.2 121 58.7
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 2.8e-38 162.2 121 58.7
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 2.8e-38 162.2 121 58.7
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 3.6e-38 161.8 130 58.5
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 3.6e-38 161.8 120 63.3
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 4.7e-38 161.4 122 61.5
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.1e-37 160.2 128 59.4
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.4e-37 159.8 121 60.3
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 3.1e-37 158.7 141 56.7
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 3.1e-37 158.7 122 59.8
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 4.0e-37 158.3 123 64.2
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 6.8e-37 157.5 123 56.1
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.5e-36 156.4 149 55.0
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 3.4e-36 155.2 103 71.8
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 4.4e-36 154.8 123 58.5
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 3.7e-35 151.8 130 58.5
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.2e-34 147.1 103 68.0
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 1.2e-33 146.7 123 56.1
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.2e-33 146.7 117 58.1
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 2.7e-33 145.6 109 64.2
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 3.9e-32 141.7 114 60.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.0e-28 129.4 130 50.0
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.2e-27 125.9 80 72.5
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 2.9e-27 125.6 79 74.7
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.6e-24 114.0 80 68.8
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.4e-21 106.7 123 46.3
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 3.1e-21 105.5 112 48.2
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.0e-20 102.8 81 64.2
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 5.8e-20 101.3 86 58.1
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 7.6e-20 100.9 59 76.3
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 3.9e-16 88.6 106 47.2
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 2.4e-10 69.3 104 39.4
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 5.4e-10 68.2 90 42.2
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 3.0e-08 62.4 51 56.9


User provided reference genes

Program Settings