Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044722.1 Olea europaea HOM05D005116 ORTHO05D005937 2.9e-70 268.5 136 100.0
Oeu035627.2 Olea europaea HOM05D005116 ORTHO05D005937 3.7e-33 145.2 191 49.2
Migut.M00082 Erythranthe guttata HOM05D005116 ORTHO05D005937 3.6e-20 102.1 185 36.2
CiPaw.03G178700 Carya illinoinensis HOM05D005116 ORTHO05D005937 6.7e-19 97.8 177 39.0
PSO210G2339 Papaver somniferum HOM05D005116 ORTHO05D005937 1.5e-18 96.7 194 35.1
TAR629G1139 Trochodendron aralioides HOM05D005116 ORTHO05D005937 2.5e-18 95.9 193 35.8
PSO832G2322 Papaver somniferum HOM05D005116 ORTHO05D005937 9.7e-18 94.0 194 35.1
Solyc07g053860.3 Solanum lycopersicum HOM05D005116 ORTHO05D005937 1.3e-17 93.6 188 36.2
Cpa.g.sc83.62 Carica papaya HOM05D005116 ORTHO05D005937 1.7e-17 93.2 189 36.0
Manes.13G144900 Manihot esculenta HOM05D005116 ORTHO05D005937 2.2e-17 92.8 163 38.7
Atru.chr6.2899 Acer truncatum HOM05D005116 ORTHO05D005937 2.8e-17 92.4 175 36.0
CARHR003090 Cardamine hirsuta HOM05D005116 ORTHO05D005937 2.8e-17 92.4 159 36.5
Sopen07g027830 Solanum pennellii HOM05D005116 ORTHO05D005937 3.7e-17 92.0 187 35.8
Potri.017G012500 Populus trichocarpa HOM05D005116 ORTHO05D005937 4.8e-17 91.7 156 39.7
TAR627G0112 Trochodendron aralioides HOM05D005116 ORTHO05D005937 6.3e-17 91.3 193 35.8
Thecc.06G001400 Theobroma cacao HOM05D005116 ORTHO05D005937 8.2e-17 90.9 195 34.9
Dinv13395 Davidia involucrata HOM05D005116 ORTHO05D005937 1.8e-16 89.7 172 36.0
TWI59G1245 Tripterygium wilfordii HOM05D005116 ORTHO05D005937 2.4e-16 89.4 154 39.0
MD09G1244900 Malus domestica HOM05D005116 ORTHO05D005937 5.3e-16 88.2 177 35.6
Sc09g0006700 Simmondsia chinensis HOM05D005116 ORTHO05D005937 9.1e-16 87.4 200 33.0
DCAR_013025 Daucus carota HOM05D005116 ORTHO05D005937 1.2e-15 87.0 178 34.3
AT1G03760 Arabidopsis thaliana HOM05D005116 ORTHO05D005937 1.5e-15 86.7 186 34.9
THA.LOC104826035 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 2.0e-15 86.3 175 34.9
CANSAT64G0665 Cannabis sativa HOM05D005116 ORTHO05D005937 3.4e-15 85.5 155 36.1
Duzib052G0489 Durio zibethinus HOM05D005116 ORTHO05D005937 3.4e-15 85.5 170 35.3
Aa31LG1G8970 Aethionema arabicum HOM05D005116 ORTHO05D005937 4.5e-15 85.1 163 35.6
Gohir.D01G017400 Gossypium hirsutum HOM05D005116 ORTHO05D005937 1.3e-14 83.6 174 36.8
Actinidia11017 Actinidia chinensis HOM05D005116 ORTHO05D005937 1.7e-14 83.2 158 36.1
Hund01029 Selenicereus undatus HOM05D005116 ORTHO05D005937 1.7e-14 83.2 121 43.8
HanXRQChr15g0470251 Helianthus annuus HOM05D005116 ORTHO05D005937 2.2e-14 82.8 181 32.0
CDE02G0148 Ceratophyllum demersum HOM05D005116 ORTHO05D005937 2.9e-14 82.4 85 55.3
Cc00_g12320 Coffea canephora HOM05D005116 ORTHO05D005937 2.9e-14 82.4 196 33.7
FAN13G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 2.9e-14 82.4 186 34.4
RcHm_v2.0_Chr7g0225641 Rosa chinensis HOM05D005116 ORTHO05D005937 2.9e-14 82.4 186 33.3
Duzib248G1083 Durio zibethinus HOM05D005116 ORTHO05D005937 3.8e-14 82.0 166 34.9
Gohir.A01G018800 Gossypium hirsutum HOM05D005116 ORTHO05D005937 3.8e-14 82.0 182 35.2
Gorai.002G019600 Gossypium raimondii HOM05D005116 ORTHO05D005937 3.8e-14 82.0 182 35.7
RcHm_v2.0_Chr4g0410421 Rosa chinensis HOM05D005116 ORTHO05D005937 3.8e-14 82.0 186 32.8
Sabra17G0010300 Salix brachista HOM05D005116 ORTHO05D005937 3.8e-14 82.0 143 40.6
AUR62029845 Chenopodium quinoa HOM05D005116 ORTHO05D005937 6.5e-14 81.3 177 34.5
Thhalv10007808m.g Eutrema salsugineum HOM05D005116 ORTHO05D005937 6.5e-14 81.3 159 35.2
AL1G13310 Arabidopsis lyrata HOM05D005116 ORTHO05D005937 8.5e-14 80.9 155 33.5
FvH4_5g30750 Fragaria vesca HOM05D005116 ORTHO05D005937 8.5e-14 80.9 186 33.9
FAN18G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 8.5e-14 80.9 186 33.9
GSVIVG01020569001 Vitis vinifera HOM05D005116 ORTHO05D005937 8.5e-14 80.9 201 32.8
Sp1g02620 Schrenkiella parvula HOM05D005116 ORTHO05D005937 1.1e-13 80.5 190 32.1
ECA234G2480 Erigeron canadensis HOM05D005116 ORTHO05D005937 1.4e-13 80.1 120 44.2
arahy.Tifrunner.gnm1.ann1.3GE2A8 Arachis hypogaea HOM05D005116 ORTHO05D005937 2.5e-13 79.3 170 33.5
Carub.0001s0286 Capsella rubella HOM05D005116 ORTHO05D005937 2.5e-13 79.3 181 31.5
Lalb_Chr03g0029531 Lupinus albus HOM05D005116 ORTHO05D005937 2.5e-13 79.3 195 33.3
PGR042G3305 Punica granatum HOM05D005116 ORTHO05D005937 3.2e-13 79.0 135 40.0
unitig_748.g8536 Utricularia gibba HOM05D005116 ORTHO05D005937 3.2e-13 79.0 177 33.3
Prupe.4G278300 Prunus persica HOM05D005116 ORTHO05D005937 4.2e-13 78.6 192 31.8
EL10Ac5g11143 Beta vulgaris HOM05D005116 ORTHO05D005937 5.5e-13 78.2 155 33.5
Ciclev10015471m.g Citrus clementina HOM05D005116 ORTHO05D005937 5.5e-13 78.2 174 35.1
PSO478G3970 Papaver somniferum HOM05D005116 ORTHO05D005937 5.5e-13 78.2 158 37.3
QL08p039613 Quercus lobata HOM05D005116 ORTHO05D005937 7.2e-13 77.8 66 57.6
SalBow7G1661 Salvia bowleyana HOM05D002934 ORTHO05D003937 7.2e-13 77.8 196 30.6
Ah.09g227990 Amaranthus hybridus HOM05D005116 ORTHO05D005937 9.4e-13 77.4 127 40.2
arahy.Tifrunner.gnm1.ann1.KES1NF Arachis hypogaea HOM05D005116 ORTHO05D005937 9.4e-13 77.4 169 33.1
Ciclev10015278m.g Citrus clementina HOM05D005116 ORTHO05D005937 9.4e-13 77.4 121 42.1
Sc09g0004750 Simmondsia chinensis HOM05D005116 ORTHO05D005937 9.4e-13 77.4 203 30.5
ClCG02G017750 Citrullus lanatus HOM05D005116 ORTHO05D005937 1.2e-12 77.0 161 34.2
CSS0036411 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 1.6e-12 76.6 140 39.3
HanXRQChr16g0525341 Helianthus annuus HOM05D005116 ORTHO05D005937 1.6e-12 76.6 111 42.3
Oeu023568.1 Olea europaea HOM05D005116 ORTHO05D005937 1.6e-12 76.6 43 81.4
CSS0044850 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 2.7e-12 75.9 140 39.3
MBI07_g40350_MAGBIO Magnolia biondii HOM05D005116 ORTHO05D005937 2.7e-12 75.9 206 32.0
CAN.G209.35 Capsicum annuum HOM05D005116 ORTHO05D005937 4.7e-12 75.1 165 34.5
Lj3g0009567 Lotus japonicus HOM05D005116 ORTHO05D005937 1.4e-11 73.6 122 40.2
Ca_18939_v3 Cicer arietinum L. HOM05D005116 ORTHO05D005937 1.8e-11 73.2 130 38.5
Gorai.005G200500 Gossypium raimondii HOM05D005116 ORTHO05D005937 1.8e-11 73.2 155 36.8
THA.LOC104801168 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 1.8e-11 73.2 173 31.2
Phvul.011G115315 Phaseolus vulgaris HOM05D005116 ORTHO05D005937 2.3e-11 72.8 171 32.7
Aqoxy4G00731 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 3.0e-11 72.4 190 32.6
COL.COLO4_05946 Corchorus olitorius HOM05D005116 ORTHO05D005937 3.0e-11 72.4 175 33.7
ATR0763G277 Amborella trichopoda HOM05D005116 ORTHO05D005937 3.9e-11 72.0 187 29.9
MELO3C013631.2 Cucumis melo HOM05D005116 ORTHO05D005937 3.9e-11 72.0 161 32.3
Gohir.D02G178750 Gossypium hirsutum HOM05D005116 ORTHO05D005937 5.1e-11 71.6 163 37.4
Glyma.12G116000 Glycine max HOM05D005116 ORTHO05D005937 6.7e-11 71.2 171 31.0
vmacro15911 Vaccinium macrocarpon HOM05D005116 ORTHO05D005937 6.7e-11 71.2 116 40.5
MSTRG.25027 Avicennia marina HOM05D005116 ORTHO05D005937 1.1e-10 70.5 101 43.6
Sed0010367 Sechium edule HOM05D005116 ORTHO05D005937 1.1e-10 70.5 121 38.0
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 1.1e-10 70.5 50 68.0
VMungo1127G1891 Vigna mungo HOM05D005116 ORTHO05D005937 1.1e-10 70.5 93 44.1
Eucgr.A01831 Eucalyptus grandis HOM05D005116 ORTHO05D005937 1.5e-10 70.1 136 37.5
Rhsim06G0139500 Rhododendron simsii HOM05D005116 ORTHO05D005937 1.5e-10 70.1 168 32.7
RhsimUnG0145200 Rhododendron simsii HOM05D005116 ORTHO05D005937 1.5e-10 70.1 168 32.7
Psat7g169080 Pisum sativum HOM05D005116 ORTHO05D005937 2.0e-10 69.7 41 70.7
CsaV3_6G012810 Cucumis sativus L. HOM05D005116 ORTHO05D005937 2.6e-10 69.3 138 37.7
Mapoly0076s0049 Marchantia polymorpha HOM05D005116 ORTHO05D005937 9.7e-10 67.4 94 46.8
Os01g0928300 Oryza sativa ssp. japonica HOM05D005116 ORTHO05D005937 9.7e-10 67.4 41 73.2
TPR.G29254 Trifolium pratense HOM05D005116 ORTHO05D005937 2.8e-09 65.9 123 38.2
HPP92_007017 Vanilla planifolia HOM05D005116 ORTHO05D005937 2.8e-09 65.9 87 49.4
SMO115G0247 Selaginella moellendorffii HOM05D005116 ORTHO05D005937 1.1e-08 63.9 103 41.7
SEGI_12795 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 1.4e-08 63.5 147 36.7
SEGI_15947 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 1.4e-08 63.5 147 36.7
AagrBONN_evm.TU.Sc2ySwM_368.1082 Anthoceros agrestis HOM05D005116 ORTHO05D005937 3.1e-08 62.4 60 53.3
Actinidia11090 Actinidia chinensis HOM05D005116 ORTHO05D005937 4.1e-08 62.0 136 36.8
AagrBONN_evm.TU.Sc2ySwM_344.4439 Anthoceros agrestis HOM05D005116 ORTHO05D005937 2.0e-07 59.7 102 36.3
BraA08t35622Z Brassica rapa HOM05D005116 ORTHO05D005937 2.0e-07 59.7 133 33.8
CBR_g73964 Chara braunii HOM05D005116 ORTHO05D005937 3.4e-07 58.9 93 37.6
Lj8A109T77 Lonicera japonica HOM05D005116 ORTHO05D005937 3.4e-07 58.9 169 32.0
Pp3c13_17680 Physcomitrium patens HOM05D005116 ORTHO05D005937 4.5e-07 58.5 115 40.0
Glyma.12G137500 Glycine max HOM05D005116 ORTHO05D005937 2.2e-06 56.2 55 52.7
A08p37240 Brassica napus HOM05D005116 ORTHO05D005937 3.8e-06 55.5 126 33.3
BcaC07g36947 Brassica carinata HOM05D005116 ORTHO05D005937 6.5e-06 54.7 157 30.6
Cre13.g576350 Chlamydomonas reinhardtii HOM05D005116 ORTHO05D005937 6.5e-06 54.7 46 52.2


User provided reference genes

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