Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 1.7e-54 215.7 102 100.0
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 6.5e-35 150.6 102 73.5
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 8.6e-19 97.1 113 54.0
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.1e-18 96.7 116 50.9
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 2.5e-18 95.5 105 52.4
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 3.6e-17 91.7 113 47.8
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 4.7e-17 91.3 117 53.0
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 6.1e-17 90.9 113 54.0
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 2.3e-16 89.0 114 47.4
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 3.0e-16 88.6 114 48.2
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 8.9e-16 87.0 112 47.3
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.2e-15 86.7 115 47.0
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 1.5e-15 86.3 107 45.8
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 3.4e-15 85.1 119 45.4
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.8e-15 84.3 104 47.1
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 7.5e-15 84.0 110 46.4
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 9.8e-15 83.6 123 41.5
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 9.8e-15 83.6 123 41.5
Lj4g0025770 Lotus japonicus HOM05D005816 ORTHO05D006915 9.8e-15 83.6 101 47.5
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 1.3e-14 83.2 117 44.4
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 2.2e-14 82.4 110 47.3
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 2.2e-14 82.4 119 47.1
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 2.9e-14 82.0 114 46.5
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 2.9e-14 82.0 119 42.0
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 3.7e-14 81.6 116 45.7
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 4.9e-14 81.3 106 48.1
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 6.4e-14 80.9 127 44.1
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 8.3e-14 80.5 105 45.7
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.1e-13 80.1 123 39.8
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 1.1e-13 80.1 116 45.7
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.4e-13 79.7 123 39.8
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 1.4e-13 79.7 115 46.1
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 1.8e-13 79.3 106 47.2
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 1.8e-13 79.3 107 44.9
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 1.8e-13 79.3 127 41.7
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 2.4e-13 79.0 114 46.5
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 2.4e-13 79.0 118 44.1
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 2.4e-13 79.0 112 42.9
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 4.1e-13 78.2 109 46.8
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 5.4e-13 77.8 105 46.7
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 5.4e-13 77.8 110 48.2
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 7.0e-13 77.4 130 41.5
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 7.0e-13 77.4 104 46.2
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 7.0e-13 77.4 104 46.2
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 2.0e-12 75.9 105 45.7
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 2.0e-12 75.9 112 46.4
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 2.0e-12 75.9 120 41.7
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.5e-12 75.1 120 43.3
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.6e-12 74.7 121 43.8
Lsat_1_v5_gn_3_58221 Lactuca sativa HOM05D005816 ORTHO05D006915 4.6e-12 74.7 102 38.2
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 6.0e-12 74.3 119 41.2
Solyc05g009915.1 Solanum lycopersicum HOM05D005816 ORTHO05D006915 6.0e-12 74.3 113 38.9
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 6.0e-12 74.3 68 60.3
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 7.8e-12 73.9 130 43.8
PGSC0003DMG400000830 Solanum tuberosum HOM05D005816 ORTHO05D006915 7.8e-12 73.9 111 39.6
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 1.0e-11 73.6 123 42.3
Medtr1g093800 Medicago truncatula HOM05D005816 ORTHO05D006915 1.0e-11 73.6 109 42.2
Aa31sc79G90 Aethionema arabicum HOM05D005816 ORTHO05D006915 1.3e-11 73.2 102 44.1
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 1.3e-11 73.2 109 45.0
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 1.3e-11 73.2 109 45.0
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 1.7e-11 72.8 107 43.9
Psat4g043720 Pisum sativum HOM05D005816 ORTHO05D006915 3.0e-11 72.0 105 41.9
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 3.0e-11 72.0 136 43.4
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.9e-11 71.6 120 41.7
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.9e-11 71.6 113 45.1
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 3.9e-11 71.6 115 42.6
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 3.9e-11 71.6 107 44.9
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.0e-11 71.2 111 42.3
THA.LOC104821965 Tarenaya hassleriana HOM05D005816 ORTHO05D006915 5.0e-11 71.2 113 41.6
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 6.6e-11 70.9 113 36.3
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 6.6e-11 70.9 70 55.7
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 6.6e-11 70.9 116 44.8
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 1.1e-10 70.1 73 56.2
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 1.1e-10 70.1 107 43.9
Lsat_1_v5_gn_4_112260 Lactuca sativa HOM05D005816 ORTHO05D006915 1.1e-10 70.1 63 60.3
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 1.5e-10 69.7 70 55.7
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.5e-10 69.7 113 42.5
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 2.5e-10 68.9 111 41.4
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 3.3e-10 68.6 107 39.3
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 3.3e-10 68.6 117 42.7
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 4.3e-10 68.2 109 38.5
PGSC0003DMG400005703 Solanum tuberosum HOM05D005816 ORTHO05D006915 4.3e-10 68.2 95 45.3
SGA_v2.0_scaffold59G20629 Striga asiatica HOM05D005816 ORTHO05D006915 4.3e-10 68.2 74 48.6
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 5.6e-10 67.8 121 42.1
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 5.6e-10 67.8 119 42.9
VMungo1215G1388 Vigna mungo HOM05D005816 ORTHO05D006915 5.6e-10 67.8 97 45.4
BcaC03g14990 Brassica carinata HOM05D005816 ORTHO05D006915 7.3e-10 67.4 123 39.8
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 7.3e-10 67.4 127 39.4
Gohir.D02G116175 Gossypium hirsutum HOM05D005816 ORTHO05D006915 7.3e-10 67.4 102 45.1
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 9.5e-10 67.0 60 58.3
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 9.5e-10 67.0 119 40.3
Cpa.g.sc13.61 Carica papaya HOM05D005816 ORTHO05D006915 9.5e-10 67.0 61 59.0
ClCG01G005730 Citrullus lanatus HOM05D005816 ORTHO05D006915 9.5e-10 67.0 71 53.5
C06p48080 Brassica napus HOM05D005816 ORTHO05D006915 1.2e-09 66.6 108 44.4
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 1.2e-09 66.6 104 43.3
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.6e-09 66.2 60 58.3
Sopen03g038660 Solanum pennellii HOM05D005816 ORTHO05D006915 1.6e-09 66.2 95 47.4
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 2.8e-09 65.5 63 60.3
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 2.8e-09 65.5 119 42.0
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 3.6e-09 65.1 107 45.8
QL10p023002 Quercus lobata HOM05D005816 ORTHO05D006915 3.6e-09 65.1 117 38.5
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 4.7e-09 64.7 105 40.0
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 6.2e-09 64.3 104 37.5
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 1.1e-08 63.5 122 37.7
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 1.1e-08 63.5 122 37.7
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 1.1e-08 63.5 53 64.2
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 1.1e-08 63.5 70 54.3
Sopen05g005720 Solanum pennellii HOM05D005816 ORTHO05D006915 1.1e-08 63.5 77 42.9
Medtr8g076990 Medicago truncatula HOM05D005816 ORTHO05D006915 1.4e-08 63.2 71 53.5
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.8e-08 62.8 57 59.6
Gohir.A03G097050 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.8e-08 62.8 103 44.7
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 2.3e-08 62.4 114 37.7
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 2.3e-08 62.4 117 39.3
CiPaw.15G126000 Carya illinoinensis HOM05D005816 ORTHO05D006915 5.2e-08 61.2 117 36.8
CARHR061620 Cardamine hirsuta HOM05D005816 ORTHO05D006915 6.8e-08 60.8 115 40.0
Hma1.2p1_0354F.1_g133580 Hydrangea macrophylla HOM05D007541 ORTHO05D009404 6.8e-08 60.8 77 44.2
Sp5g23900 Schrenkiella parvula HOM05D005816 ORTHO05D006915 6.8e-08 60.8 119 37.8
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 8.9e-08 60.5 62 53.2
BcaB03g15849 Brassica carinata HOM05D005816 ORTHO05D006915 8.9e-08 60.5 121 38.0
Nn4g23363 Nelumbo nucifera HOM05D007541 ORTHO05D009404 1.2e-07 60.1 49 67.3
Eucgr.B00694 Eucalyptus grandis HOM05D005816 ORTHO05D006915 1.5e-07 59.7 102 41.2
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 2.0e-07 59.3 115 38.3
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 2.0e-07 59.3 115 39.1
Sp5g29165 Schrenkiella parvula HOM05D005816 ORTHO05D006915 2.6e-07 58.9 98 41.8
Gohir.A03G103500 Gossypium hirsutum HOM05D007541 ORTHO05D009404 1.7e-06 56.2 53 58.5
Gohir.D02G128700 Gossypium hirsutum HOM05D007541 ORTHO05D009404 1.7e-06 56.2 53 58.5
Gorai.005G144400 Gossypium raimondii HOM05D007541 ORTHO05D009404 1.7e-06 56.2 53 58.5
Cfa008899 Carpinus fangiana HOM05D007541 ORTHO05D009404 2.2e-06 55.8 72 45.8
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 2.2e-06 55.8 114 37.7
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 2.2e-06 55.8 69 49.3
Lj5g0018872 Lotus japonicus HOM05D005816 ORTHO05D006915 2.2e-06 55.8 101 40.6
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 2.9e-06 55.5 107 42.1
Nn3g17389 Nelumbo nucifera HOM05D007541 ORTHO05D009404 3.7e-06 55.1 94 39.4
Lalb_Chr17g0341081 Lupinus albus HOM05D007541 ORTHO05D009404 4.9e-06 54.7 45 57.8
ATR0681G007 Amborella trichopoda HOM05D005816 ORTHO05D006915 6.4e-06 54.3 71 47.9
Migut.L01210 Erythranthe guttata HOM05D007541 ORTHO05D009404 6.4e-06 54.3 48 58.3
PSO017G0024 Papaver somniferum HOM05D005816 ORTHO05D006915 6.4e-06 54.3 24 95.8
Sed0012991 Sechium edule HOM05D005816 ORTHO05D006915 6.4e-06 54.3 55 52.7
Sopen05g007360 Solanum pennellii HOM05D007541 ORTHO05D009404 6.4e-06 54.3 97 36.1


User provided reference genes

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