Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 3.4e-135 485.0 235 100.0
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.5e-95 353.2 232 70.7
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 3.9e-91 338.6 242 67.4
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.9e-90 336.3 228 74.1
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.3e-89 333.6 231 70.1
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 4.0e-88 328.6 234 67.9
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.2e-86 322.8 233 67.0
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 3.8e-86 322.0 237 66.2
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 8.4e-86 320.9 240 68.3
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.9e-85 319.7 236 67.4
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 4.2e-85 318.5 238 65.1
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 4.2e-85 318.5 237 67.9
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 5.5e-85 318.2 235 65.1
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 5.5e-85 318.2 240 65.4
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 9.3e-85 317.4 233 64.8
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 6.0e-84 314.7 234 64.5
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.0e-83 313.9 236 64.0
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 2.3e-83 312.8 237 65.4
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 6.7e-83 311.2 220 70.9
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 8.7e-83 310.8 232 65.1
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 2.5e-82 309.3 233 63.5
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 4.3e-82 308.5 233 64.8
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 4.3e-82 308.5 233 64.8
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 4.8e-81 305.1 232 62.5
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.8e-81 305.1 237 63.3
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 6.2e-81 304.7 232 62.5
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 6.2e-81 304.7 241 62.7
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.1e-80 303.9 236 63.1
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.4e-80 302.8 242 62.8
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 3.4e-79 298.9 242 61.6
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.7e-78 296.6 229 61.6
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.7e-78 296.6 209 68.9
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 3.8e-78 295.4 245 59.6
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 6.5e-78 294.7 216 66.2
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 6.5e-78 294.7 239 64.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 7.1e-77 291.2 241 62.7
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.1e-76 289.7 239 63.2
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.8e-75 286.6 241 57.7
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 2.3e-75 286.2 230 60.4
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 2.3e-75 286.2 240 60.0
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 8.7e-75 284.3 247 58.7
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.1e-74 283.9 234 61.5
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.9e-74 283.1 217 63.1
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.9e-74 283.1 233 59.7
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 3.3e-74 282.3 237 60.8
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 4.3e-74 282.0 236 60.6
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 5.7e-74 281.6 244 56.6
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-73 280.4 249 58.6
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.6e-73 280.0 252 58.7
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.5e-71 273.5 215 61.9
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 4.5e-71 271.9 225 60.4
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 2.9e-70 269.2 234 59.4
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 8.4e-70 267.7 240 55.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.4e-69 266.9 224 59.4
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 3.2e-69 265.8 243 56.8
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 4.2e-69 265.4 180 70.6
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.2e-69 265.4 250 57.6
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.2e-69 265.4 214 60.7
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.2e-69 265.4 214 60.7
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 6.1e-68 261.5 192 65.1
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 6.7e-67 258.1 234 56.0
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 6.7e-67 258.1 210 59.5
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 6.7e-67 258.1 172 72.7
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 8.7e-67 257.7 236 53.8
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 4.3e-66 255.4 232 55.2
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 7.4e-66 254.6 264 53.8
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 2.2e-65 253.1 230 53.9
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 2.2e-65 253.1 279 50.5
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 2.2e-65 253.1 277 50.2
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 3.7e-65 252.3 231 54.5
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 4.8e-65 251.9 235 55.7
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 4.8e-65 251.9 231 54.1
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 8.2e-65 251.1 228 57.9
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.2e-63 247.3 202 57.9
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.2e-63 247.3 230 55.2
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.2e-63 247.3 226 56.2
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 1.5e-63 246.9 233 56.7
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.0e-62 244.2 184 64.1
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 1.7e-62 243.4 238 50.8
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 5.0e-62 241.9 228 57.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 6.5e-62 241.5 231 55.0
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 1.9e-61 240.0 231 55.0
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.6e-60 235.7 235 53.6
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.1e-56 224.2 203 57.1
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 1.1e-56 224.2 174 61.5
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 3.1e-56 222.6 251 47.8
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 7.7e-55 218.0 217 51.6
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 2.1e-52 209.9 198 54.5
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.0e-51 207.6 151 62.9
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 2.3e-51 206.5 183 56.8
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.1e-50 204.1 235 49.4
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.4e-50 202.2 174 59.8
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.7e-49 200.3 164 59.1
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 2.8e-49 199.5 212 50.5
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 4.8e-49 198.7 170 60.6
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.2e-45 184.9 193 49.2
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.2e-44 184.1 215 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 9.7e-42 174.5 164 51.8
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.8e-41 172.2 151 58.9
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.1e-37 161.0 141 59.6
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 1.9e-37 160.2 160 50.6
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.9e-37 160.2 227 38.8
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 6.3e-33 145.2 174 42.0
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 5.9e-31 138.7 93 66.7
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.8e-25 119.8 162 42.0
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.3e-21 106.3 60 78.3
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.1e-20 103.6 72 63.9
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 6.4e-17 92.0 129 35.7
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.4e-16 90.9 174 36.2
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.8e-16 90.5 69 63.8
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 9.2e-16 88.2 83 54.2
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.6e-15 87.4 80 58.8
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.0e-14 84.7 153 36.6
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.0e-14 82.4 64 60.9
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 2.5e-13 80.1 189 28.6
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.3e-09 67.8 96 44.8
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 7.0e-08 62.0 55 52.7
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.5e-07 59.7 36 63.9
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 1.3e-06 57.8 41 61.0
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.7e-06 57.4 35 62.9


User provided reference genes

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