Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 0.0e+00 1187.2 590 100.0
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 2.9e-236 822.0 535 78.7
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 1.0e-225 786.9 541 72.6
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 6.1e-218 761.1 552 69.6
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 1.5e-216 756.5 541 70.8
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 8.3e-215 750.7 542 70.5
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 5.4e-214 748.0 548 69.5
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 6.5e-212 741.1 551 68.8
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 6.8e-209 731.1 546 67.2
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.7e-207 726.5 549 67.9
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 4.9e-207 724.9 553 66.4
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.1e-206 723.8 549 66.1
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 2.4e-206 722.6 544 67.6
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.0e-205 719.5 555 65.2
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 7.7e-205 717.6 555 65.4
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.3e-204 716.8 448 77.0
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.7e-204 716.5 555 65.0
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 1.7e-204 716.5 543 66.3
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 2.9e-204 715.7 541 66.9
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 5.0e-204 714.9 549 66.8
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 6.6e-204 714.5 537 67.0
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 6.6e-204 714.5 539 67.0
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 1.9e-203 713.0 549 66.1
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 3.3e-203 712.2 549 66.5
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 4.3e-203 711.8 541 65.8
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 5.6e-203 711.4 541 66.5
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 5.6e-203 711.4 440 78.0
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 7.3e-203 711.1 549 66.5
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 1.6e-202 709.9 541 65.4
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 3.6e-202 708.8 539 66.4
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 4.7e-202 708.4 541 66.0
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 6.1e-202 708.0 552 66.7
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 1.0e-201 707.2 539 66.2
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 2.3e-201 706.1 565 62.3
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 1.2e-200 703.7 551 64.8
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 1.2e-200 703.7 549 64.8
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.2e-200 703.7 558 65.8
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 1.2e-200 703.7 547 65.6
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 1.2e-200 703.7 541 65.6
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 2.0e-200 703.0 541 65.1
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.4e-200 702.2 547 65.4
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 5.7e-200 701.4 547 65.3
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 7.5e-200 701.0 429 80.2
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 7.5e-200 701.0 542 65.3
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 1.7e-199 699.9 437 76.9
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 2.9e-199 699.1 540 65.0
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 2.9e-199 699.1 541 65.1
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.1e-198 697.2 538 65.4
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 1.1e-198 697.2 547 65.3
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 1.4e-198 696.8 541 64.3
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 3.2e-198 695.7 543 66.3
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 4.1e-198 695.3 541 65.4
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 5.4e-198 694.9 546 64.5
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 9.2e-198 694.1 546 64.8
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 3.5e-197 692.2 540 65.2
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.7e-196 689.9 547 64.4
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 3.0e-196 689.1 546 65.0
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 2.5e-195 686.0 541 64.7
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 2.5e-195 686.0 569 65.2
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 9.5e-195 684.1 541 64.9
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.2e-192 677.2 546 62.1
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 2.6e-192 676.0 546 63.2
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 4.4e-192 675.2 542 63.7
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.9e-191 672.5 547 62.0
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 1.9e-190 669.8 546 62.1
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.7e-188 663.3 555 63.2
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 3.0e-188 662.5 546 61.5
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 5.0e-188 661.8 541 63.6
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 9.5e-187 657.5 540 62.6
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 3.6e-186 655.6 539 62.7
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 5.2e-185 651.7 499 65.9
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 3.7e-183 645.6 547 60.9
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 4.6e-181 638.6 547 60.9
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 1.7e-180 636.7 545 60.0
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.4e-177 627.1 409 72.6
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 1.8e-177 626.7 548 60.4
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.0e-177 625.5 541 60.3
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 1.2e-176 624.0 541 61.6
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 2.0e-176 623.2 541 60.4
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 4.4e-176 622.1 549 59.7
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 7.6e-176 621.3 546 59.7
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 9.9e-176 620.9 551 61.0
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 3.8e-175 619.0 546 59.5
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 4.9e-175 618.6 463 69.3
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 5.4e-174 615.1 545 59.4
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 7.1e-174 614.8 411 71.5
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 9.2e-174 614.4 546 60.1
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 1.7e-172 610.1 541 59.7
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 2.3e-172 609.8 546 59.7
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 6.6e-172 608.2 546 59.5
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 2.5e-171 606.3 541 59.9
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 3.3e-171 605.9 568 56.5
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 4.3e-171 605.5 540 58.1
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 1.6e-170 603.6 541 59.5
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 1.6e-170 603.6 546 58.8
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 1.6e-170 603.6 546 59.2
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 1.6e-170 603.6 546 58.8
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 1.6e-170 603.6 499 60.9
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 1.6e-170 603.6 541 59.3
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 4.7e-170 602.1 441 68.3
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 4.7e-170 602.1 541 57.7
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 1.8e-169 600.1 541 59.0
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 8.9e-169 597.8 543 57.1
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 1.2e-168 597.4 541 58.6
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 3.4e-168 595.9 587 53.8
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.3e-167 594.0 547 58.5
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 3.2e-166 589.3 544 58.8
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 1.1e-163 580.9 363 75.2
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 3.5e-157 559.3 350 76.0
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 1.1e-155 554.3 556 57.4
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.1e-150 537.7 361 72.3
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 3.5e-149 532.7 554 52.2
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 3.4e-144 516.2 590 50.3
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 3.1e-137 493.0 547 51.6
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 3.1e-137 493.0 569 48.7
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 4.1e-137 492.7 548 50.9
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 4.5e-136 489.2 550 49.8
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 8.2e-122 441.8 550 44.9
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 1.7e-114 417.5 621 39.8
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 9.1e-113 411.8 549 45.4
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 6.1e-109 399.1 327 66.1
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 2.0e-107 394.0 242 80.6
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 5.7e-107 392.5 306 64.1
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 7.2e-102 375.6 342 55.8
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.3e-87 328.2 282 64.9
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 8.9e-84 315.5 379 45.6
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 2.6e-83 313.9 556 37.8
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.4e-81 307.4 199 71.9
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.1e-73 282.0 250 62.0
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 6.0e-72 276.2 345 45.8
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 1.5e-70 271.6 507 38.5
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 1.5e-67 261.5 566 31.6
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.3e-66 258.5 272 50.4
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 6.0e-56 223.0 562 30.8
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.1e-55 219.9 546 33.0
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.7e-53 213.4 174 61.5
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.8e-52 211.5 295 43.7
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 2.6e-51 207.6 207 52.7
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 1.7e-50 204.9 181 57.5
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 5.4e-49 199.9 198 52.5
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.2e-48 198.7 111 79.3
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.3e-47 195.3 111 77.5
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 5.1e-47 193.4 111 76.6
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 8.4e-42 176.0 197 50.3
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 1.3e-39 168.7 124 64.5
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 8.7e-39 166.0 111 68.5
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 3.3e-38 164.1 105 73.3
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 2.0e-35 154.8 341 33.4
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 7.1e-33 146.4 122 59.0
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 1.3e-31 142.1 92 69.6
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 4.3e-30 137.1 116 58.6
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 4.0e-28 130.6 67 92.5
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 2.2e-26 124.8 180 42.8
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 1.0e-23 115.9 125 54.4
Hma1.2p1_0035F.1_g022190 Hydrangea macrophylla HOM05D004406 ORTHO05D005660 1.0e-18 99.4 58 77.6
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 1.7e-10 72.0 139 35.3
Gohir.D11G203250 Gossypium hirsutum HOM05D004406 ORTHO05D012367 2.3e-07 61.6 46 58.7
vmacro12020 Vaccinium macrocarpon HOM05D004406 ORTHO05D036510 1.5e-06 58.9 39 76.9
vmacro15157 Vaccinium macrocarpon HOM05D004406 ORTHO05D036510 3.3e-06 57.8 39 74.4
DCAR_010031 Daucus carota HOM05D000781 ORTHO05D012367 7.4e-06 56.6 45 60.0


User provided reference genes

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