Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044394.1 Olea europaea HOM05D004290 ORTHO05D005025 1.8e-83 312.4 145 100.0
SGA_v2.0_scaffold14G06802 Striga asiatica HOM05D004290 ORTHO05D005025 2.0e-45 186.0 129 69.8
SGA_v2.0_scaffold14G06801 Striga asiatica HOM05D004290 ORTHO05D005025 3.4e-45 185.3 129 69.0
Cc11_g10800 Coffea canephora HOM05D004290 ORTHO05D005025 6.4e-44 181.0 135 65.9
Cc11_g10790 Coffea canephora HOM05D004290 ORTHO05D005025 1.9e-43 179.5 130 66.9
SalBow8G1203 Salvia bowleyana HOM05D004290 ORTHO05D005025 5.4e-43 177.9 133 66.2
SalBow8G5193 Salvia bowleyana HOM05D004290 ORTHO05D005025 5.4e-43 177.9 133 66.2
CiPaw.05G172700 Carya illinoinensis HOM05D004290 ORTHO05D005025 7.1e-43 177.6 134 61.2
Lj3A1022T62 Lonicera japonica HOM05D004290 ORTHO05D005025 9.3e-43 177.2 137 63.5
Aqoxy3G03864 Aquilegia oxysepala HOM05D004290 ORTHO05D005025 1.2e-42 176.8 134 62.7
Ah.02g127350 Amaranthus hybridus HOM05D004290 ORTHO05D005025 2.7e-42 175.6 132 66.7
unitig_744.g24286 Utricularia gibba HOM05D004290 ORTHO05D005025 2.7e-42 175.6 129 63.6
Nitab4.5_0013408g0010 Nicotiana tabacum HOM05D004290 ORTHO05D005025 1.3e-41 173.3 132 62.9
CiPaw.05G172800 Carya illinoinensis HOM05D004290 ORTHO05D005025 1.7e-41 172.9 134 60.4
Sabra08G0086600 Salix brachista HOM05D004290 ORTHO05D005025 1.7e-41 172.9 137 63.5
Hund05546 Selenicereus undatus HOM05D004290 ORTHO05D005025 1.7e-41 172.9 135 63.0
MSTRG.7697 Avicennia marina HOM05D004290 ORTHO05D005025 2.3e-41 172.6 134 63.4
CANSAT64G1327 Cannabis sativa HOM05D004290 ORTHO05D005025 3.0e-41 172.2 134 61.2
Migut.L01112 Erythranthe guttata HOM05D004290 ORTHO05D005025 5.1e-41 171.4 134 64.9
SalBow8G2020 Salvia bowleyana HOM05D004290 ORTHO05D005025 5.1e-41 171.4 130 64.6
Sopen05g005830 Solanum pennellii HOM05D004290 ORTHO05D005025 6.6e-41 171.0 132 64.4
Nitab4.5_0001178g0080 Nicotiana tabacum HOM05D004290 ORTHO05D005025 8.7e-41 170.6 132 61.4
Solyc05g010015.1 Solanum lycopersicum HOM05D004290 ORTHO05D005025 8.7e-41 170.6 132 62.9
Ciclev10033020m.g Citrus clementina HOM05D004290 ORTHO05D005025 1.1e-40 170.2 138 60.9
HanXRQChr08g0214461 Helianthus annuus HOM05D004290 ORTHO05D005025 1.5e-40 169.9 132 62.1
Nn4g23673 Nelumbo nucifera HOM05D004290 ORTHO05D005025 3.3e-40 168.7 137 58.4
QL03p037189 Quercus lobata HOM05D004290 ORTHO05D005025 3.3e-40 168.7 134 60.4
CSS0026618 Camellia sinensis var. sinensis HOM05D004290 ORTHO05D005025 4.3e-40 168.3 137 59.9
DCAR_026707 Daucus carota HOM05D004290 ORTHO05D005025 5.6e-40 167.9 134 62.7
Duzib251G0274 Durio zibethinus HOM05D004290 ORTHO05D005025 5.6e-40 167.9 135 60.0
Manes.06G074500 Manihot esculenta HOM05D004290 ORTHO05D005025 5.6e-40 167.9 135 59.3
Potri.008G114300 Populus trichocarpa HOM05D004290 ORTHO05D005025 5.6e-40 167.9 137 62.0
Thecc.02G363400 Theobroma cacao HOM05D004290 ORTHO05D005025 7.3e-40 167.5 135 61.5
GSVIVG01011978001 Vitis vinifera HOM05D004290 ORTHO05D005025 1.6e-39 166.4 134 61.2
EL10Ac6g14527 Beta vulgaris HOM05D004290 ORTHO05D005025 2.8e-39 165.6 135 62.2
RcHm_v2.0_Chr4g0436191 Rosa chinensis HOM05D004290 ORTHO05D005025 3.6e-39 165.2 134 57.5
Dinv05808 Davidia involucrata HOM05D000436 ORTHO05D005025 4.8e-39 164.9 126 62.7
QL03p036461 Quercus lobata HOM05D004290 ORTHO05D005025 4.8e-39 164.9 135 57.0
ClCG00G001430 Citrullus lanatus HOM05D004290 ORTHO05D005025 1.1e-38 163.7 134 54.5
ClCG05G023160 Citrullus lanatus HOM05D004290 ORTHO05D005025 1.1e-38 163.7 134 54.5
Sed0004732 Sechium edule HOM05D004290 ORTHO05D005025 1.4e-38 163.3 137 60.6
TWI31G0716 Tripterygium wilfordii HOM05D004290 ORTHO05D005025 1.4e-38 163.3 138 60.9
CsaV3_5G033840 Cucumis sativus L. HOM05D004290 ORTHO05D005025 1.8e-38 162.9 142 52.8
Aa31sc79G10 Aethionema arabicum HOM05D004290 ORTHO05D005025 2.4e-38 162.5 134 61.2
BcaB05g24409 Brassica carinata HOM05D004290 ORTHO05D005025 3.1e-38 162.2 133 60.2
MELO3C012202.2 Cucumis melo HOM05D004290 ORTHO05D005025 3.1e-38 162.2 134 53.7
Dinv16527 Davidia involucrata HOM05D004290 ORTHO05D005025 3.1e-38 162.2 120 65.8
ECA234G2024 Erigeron canadensis HOM05D004290 ORTHO05D005025 4.0e-38 161.8 133 57.9
PSO478G2631 Papaver somniferum HOM05D004290 ORTHO05D005025 4.0e-38 161.8 135 60.0
Sp5g23870 Schrenkiella parvula HOM05D004290 ORTHO05D005025 6.9e-38 161.0 133 58.6
MELO3C005349.2 Cucumis melo HOM05D004290 ORTHO05D005025 1.2e-37 160.2 137 57.7
Gohir.A13G071200 Gossypium hirsutum HOM05D004290 ORTHO05D005025 1.2e-37 160.2 135 57.8
AT1G68760 Arabidopsis thaliana HOM05D004290 ORTHO05D005025 1.5e-37 159.8 133 57.1
FvH4_4g28340 Fragaria vesca HOM05D004290 ORTHO05D005025 1.5e-37 159.8 134 55.2
FAN22G0640 Fragaria x ananassa HOM05D004290 ORTHO05D005025 1.5e-37 159.8 134 55.2
Sed0009817 Sechium edule HOM05D004290 ORTHO05D005025 1.5e-37 159.8 134 55.2
DCAR_023699 Daucus carota HOM05D004290 ORTHO05D005025 2.0e-37 159.5 131 58.0
Gohir.D13G069200 Gossypium hirsutum HOM05D004290 ORTHO05D005025 2.0e-37 159.5 135 57.0
Gorai.013G079300 Gossypium raimondii HOM05D004290 ORTHO05D005025 2.0e-37 159.5 135 57.0
THA.LOC104821971 Tarenaya hassleriana HOM05D004290 ORTHO05D005025 2.0e-37 159.5 139 56.8
FAN12G2228 Fragaria x ananassa HOM05D004290 ORTHO05D005025 2.6e-37 159.1 134 55.2
Eucgr.B03066 Eucalyptus grandis HOM05D004290 ORTHO05D005025 3.4e-37 158.7 134 60.4
CARHR061580 Cardamine hirsuta HOM05D004290 ORTHO05D005025 4.5e-37 158.3 133 57.1
arahy.Tifrunner.gnm1.ann1.IBNT6Z Arachis hypogaea HOM05D004290 ORTHO05D005025 5.8e-37 157.9 136 57.4
arahy.Tifrunner.gnm1.ann1.U655LF Arachis hypogaea HOM05D004290 ORTHO05D005025 5.8e-37 157.9 136 57.4
BraA02t06593Z Brassica rapa HOM05D004290 ORTHO05D005025 5.8e-37 157.9 134 59.7
SalBow8G3034 Salvia bowleyana HOM05D004290 ORTHO05D005025 7.6e-37 157.5 137 55.5
A02p15320 Brassica napus HOM05D004290 ORTHO05D005025 9.9e-37 157.1 134 59.7
C02p25170 Brassica napus HOM05D004290 ORTHO05D005025 9.9e-37 157.1 134 59.7
COL.COLO4_07852 Corchorus olitorius HOM05D004290 ORTHO05D005025 9.9e-37 157.1 130 58.5
Prupe.1G302800 Prunus persica HOM05D004290 ORTHO05D005025 9.9e-37 157.1 138 57.2
Aqoxy3G03865 Aquilegia oxysepala HOM05D004290 ORTHO05D005025 1.3e-36 156.8 133 56.4
CsaV3_5G028890 Cucumis sativus L. HOM05D004290 ORTHO05D005025 1.3e-36 156.8 137 55.5
FAN17G1675 Fragaria x ananassa HOM05D004290 ORTHO05D005025 1.3e-36 156.8 134 54.5
PGR102G2310 Punica granatum HOM05D004290 ORTHO05D005025 1.3e-36 156.8 137 59.1
AL2G27690 Arabidopsis lyrata HOM05D004290 ORTHO05D005025 2.2e-36 156.0 133 56.4
FvH4_6g24180 Fragaria vesca HOM05D004290 ORTHO05D005025 2.2e-36 156.0 134 56.0
FAN14G4265 Fragaria x ananassa HOM05D004290 ORTHO05D005025 2.2e-36 156.0 134 56.0
RcHm_v2.0_Chr2g0142071 Rosa chinensis HOM05D004290 ORTHO05D005025 2.2e-36 156.0 135 58.5
RcHm_v2.0_Chr2g0142081 Rosa chinensis HOM05D004290 ORTHO05D005025 2.2e-36 156.0 135 58.5
RcHm_v2.0_Chr2g0142111 Rosa chinensis HOM05D004290 ORTHO05D005025 2.2e-36 156.0 135 58.5
RcHm_v2.0_Chr4g0436181 Rosa chinensis HOM05D004290 ORTHO05D005025 2.2e-36 156.0 136 59.6
DCAR_017507 Daucus carota HOM05D004290 ORTHO05D005025 2.9e-36 155.6 130 57.7
DCAR_026708 Daucus carota HOM05D004290 ORTHO05D005025 2.9e-36 155.6 130 57.7
RcHm_v2.0_Chr6g0244161 Rosa chinensis HOM05D004290 ORTHO05D005025 2.9e-36 155.6 133 59.4
Sc04g0006830 Simmondsia chinensis HOM05D004290 ORTHO05D005025 3.8e-36 155.2 133 56.4
C04p37630 Brassica napus HOM05D004290 ORTHO05D005025 4.9e-36 154.8 134 59.0
Lsat_1_v5_gn_8_37520 Lactuca sativa HOM05D004290 ORTHO05D005025 6.4e-36 154.5 132 57.6
BolC2t08596H Brassica oleracea HOM05D004290 ORTHO05D005025 8.4e-36 154.1 134 59.0
Thhalv10019297m.g Eutrema salsugineum HOM05D004290 ORTHO05D005025 8.4e-36 154.1 135 58.5
Cfa008781 Carpinus fangiana HOM05D004290 ORTHO05D005025 1.1e-35 153.7 144 54.2
Lj2g0025619 Lotus japonicus HOM05D004290 ORTHO05D005025 1.1e-35 153.7 136 58.1
CDE10G0275 Ceratophyllum demersum HOM05D004290 ORTHO05D005025 1.4e-35 153.3 133 57.9
RcHm_v2.0_Chr2g0142121 Rosa chinensis HOM05D004290 ORTHO05D005025 1.4e-35 153.3 135 57.0
Haze_11793 Corylus avellana HOM05D004290 ORTHO05D005025 1.9e-35 152.9 144 54.2
FAN09G0247 Fragaria x ananassa HOM05D004290 ORTHO05D005025 1.9e-35 152.9 134 55.2
Carub.0002s1532 Capsella rubella HOM05D004290 ORTHO05D005025 2.4e-35 152.5 136 54.4
Potri.008G114400 Populus trichocarpa HOM05D004290 ORTHO05D005025 2.4e-35 152.5 133 56.4
Prupe.1G303000 Prunus persica HOM05D004290 ORTHO05D005025 3.2e-35 152.1 133 57.1
FAN09G2488 Fragaria x ananassa HOM05D004290 ORTHO05D005025 4.2e-35 151.8 135 55.6
MD13G1049100 Malus domestica HOM05D004290 ORTHO05D005025 4.2e-35 151.8 135 57.8
Peaxi162Scf00118g01310 Petunia axillaris HOM05D004290 ORTHO05D005025 4.2e-35 151.8 136 53.7
ATR1147G043 Amborella trichopoda HOM05D004290 ORTHO05D005025 5.4e-35 151.4 133 51.1
AUR62007751 Chenopodium quinoa HOM05D004290 ORTHO05D005025 5.4e-35 151.4 135 58.5
FAN12G2396 Fragaria x ananassa HOM05D004290 ORTHO05D005025 5.4e-35 151.4 134 56.7
FvH4_4g28310 Fragaria vesca HOM05D004290 ORTHO05D005025 7.1e-35 151.0 127 58.3
FAN12G0523 Fragaria x ananassa HOM05D004290 ORTHO05D005025 7.1e-35 151.0 127 58.3
HanXRQChr16g0528791 Helianthus annuus HOM05D004290 ORTHO05D005025 7.1e-35 151.0 129 58.9
FAN07G1902 Fragaria x ananassa HOM05D004290 ORTHO05D005025 1.2e-34 150.2 134 56.0
MBI10_g35795_MAGBIO Magnolia biondii HOM05D004290 ORTHO05D005025 1.2e-34 150.2 121 62.8
ECA233G1907 Erigeron canadensis HOM05D004290 ORTHO05D005025 1.6e-34 149.8 131 55.0
Ca_19617_v3 Cicer arietinum L. HOM05D004290 ORTHO05D005025 2.7e-34 149.1 137 56.2
Ca_30768_v3 Cicer arietinum L. HOM05D004290 ORTHO05D005025 2.7e-34 149.1 137 56.2
ClCG05G023170 Citrullus lanatus HOM05D004290 ORTHO05D005025 2.7e-34 149.1 127 53.5
HanXRQChr16g0528801 Helianthus annuus HOM05D004290 ORTHO05D005025 2.7e-34 149.1 129 55.8
FvH4_4g28300 Fragaria vesca HOM05D004290 ORTHO05D005025 4.6e-34 148.3 134 56.0
Glyma.01G090900 Glycine max HOM05D004290 ORTHO05D005025 6.0e-34 147.9 136 55.9
MD13G1048900 Malus domestica HOM05D004290 ORTHO05D005025 6.0e-34 147.9 130 56.9
AUR62002942 Chenopodium quinoa HOM05D004290 ORTHO05D005025 1.0e-33 147.1 135 57.8
Lalb_Chr04g0255051 Lupinus albus HOM05D004290 ORTHO05D005025 1.3e-33 146.7 136 52.9
MD16G1050200 Malus domestica HOM05D004290 ORTHO05D005025 1.3e-33 146.7 130 58.5
ClCG01G005800 Citrullus lanatus HOM05D004290 ORTHO05D005025 2.3e-33 146.0 172 46.5
PGSC0003DMG400030259 Solanum tuberosum HOM05D004290 ORTHO05D005025 2.3e-33 146.0 135 52.6
Solyc03g043860.2 Solanum lycopersicum HOM05D004290 ORTHO05D005025 3.9e-33 145.2 135 51.1
MD16G1050100 Malus domestica HOM05D004290 ORTHO05D005025 6.7e-33 144.4 134 53.7
Phvul.003G024900 Phaseolus vulgaris HOM05D004290 ORTHO05D005025 6.7e-33 144.4 129 56.6
HPP92_021836 Vanilla planifolia HOM05D004290 ORTHO05D005025 1.1e-32 143.7 133 52.6
Psat2g074600 Pisum sativum HOM05D004290 ORTHO05D005025 2.5e-32 142.5 137 52.6
TPR.G33571 Trifolium pratense HOM05D004290 ORTHO05D005025 2.5e-32 142.5 138 55.1
Prupe.1G303100 Prunus persica HOM05D004290 ORTHO05D005025 5.6e-32 141.4 133 55.6
BcaC03g14984 Brassica carinata HOM05D004290 ORTHO05D005025 7.4e-32 141.0 133 55.6
RcHm_v2.0_Chr4g0436151 Rosa chinensis HOM05D004290 ORTHO05D005025 1.3e-31 140.2 133 55.6
Prupe.1G300800 Prunus persica HOM05D004290 ORTHO05D005025 2.8e-31 139.0 133 54.9
MSTRG.13496 Avicennia marina HOM05D004290 ORTHO05D005025 1.1e-30 137.1 133 54.9
Lsat_1_v5_gn_4_17281 Lactuca sativa HOM05D004290 ORTHO05D005025 1.4e-30 136.7 133 51.9
Peaxi162Scf00367g00519 Petunia axillaris HOM05D004290 ORTHO05D005025 1.8e-30 136.3 132 54.5
Pp3c20_17780 Physcomitrium patens HOM05D004290 ORTHO05D005025 2.4e-30 136.0 130 48.5
Medtr5g062660 Medicago truncatula HOM05D004290 ORTHO05D005025 4.0e-30 135.2 136 54.4
Prupe.1G302900 Prunus persica HOM05D004290 ORTHO05D005025 2.0e-29 132.9 136 51.5
Actinidia14836 Actinidia chinensis HOM05D000436 ORTHO05D000678 9.9e-29 130.6 114 61.4
Sopen03g007670 Solanum pennellii HOM05D004290 ORTHO05D005025 1.7e-28 129.8 131 46.6
CAN.G184.70 Capsicum annuum HOM05D004290 ORTHO05D005025 1.9e-27 126.3 108 58.3
FvH4_4g28280 Fragaria vesca HOM05D004290 ORTHO05D005025 1.6e-26 123.2 129 49.6
AagrBONN_evm.TU.Sc2ySwM_344.2294 Anthoceros agrestis HOM05D004290 ORTHO05D005025 2.7e-26 122.5 135 45.2
FAN12G1909 Fragaria x ananassa HOM05D004290 ORTHO05D005025 4.6e-26 121.7 128 47.7
Mapoly0059s0094 Marchantia polymorpha HOM05D004290 ORTHO05D005025 2.3e-25 119.4 133 43.6
QL03p036408 Quercus lobata HOM05D004290 ORTHO05D005025 3.9e-25 118.6 97 59.8
FAN22G2200 Fragaria x ananassa HOM05D004290 ORTHO05D005025 6.7e-25 117.9 194 38.7
Cre03.g184400 Chlamydomonas reinhardtii HOM05D004290 ORTHO05D005025 4.0e-22 108.6 129 43.4
FAN09G1140 Fragaria x ananassa HOM05D005343 ORTHO05D007153 5.3e-22 108.2 96 53.1
ATR1147G035 Amborella trichopoda HOM05D004290 ORTHO05D005025 5.8e-21 104.8 142 38.7
Peaxi162Scf00367g00520 Petunia axillaris HOM05D004290 ORTHO05D005025 5.8e-21 104.8 124 48.4
CBR_g26184 Chara braunii HOM05D004290 ORTHO05D005025 1.0e-20 104.0 130 40.8
Nitab4.5_0005210g0010 Nicotiana tabacum HOM05D004290 ORTHO05D005025 3.9e-17 92.0 110 42.7
Oeu018290.1 Olea europaea HOM05D004290 ORTHO05D005025 8.7e-17 90.9 46 76.1
MCO10G139 Micromonas commoda HOM05D004290 ORTHO05D005025 2.2e-15 86.3 125 36.0
PRCOL_00005217 Prasinoderma coloniale HOM05D004290 ORTHO05D005025 8.2e-15 84.3 125 40.8
RcHm_v2.0_Chr2g0142051 Rosa chinensis HOM05D004290 ORTHO05D005025 1.5e-13 80.1 49 61.2
Aqoxy3G02627 Aquilegia oxysepala HOM05D004290 ORTHO05D005025 5.9e-13 78.2 71 50.7
Solyc03g150121.1 Solanum lycopersicum HOM05D004290 ORTHO05D005025 6.5e-12 74.7 103 44.7
TAR629G2250 Trochodendron aralioides HOM05D004290 ORTHO05D005025 1.4e-11 73.6 39 69.2
Rhsim09G0114000 Rhododendron simsii HOM05D000436 ORTHO05D000678 9.4e-11 70.9 75 50.7
Prupe.1G303300 Prunus persica HOM05D004290 ORTHO05D005025 6.1e-10 68.2 99 41.4
RcHm_v2.0_Chr2g0142061 Rosa chinensis HOM05D004290 ORTHO05D005025 1.0e-09 67.4 63 58.7
FAN02G2314 Fragaria x ananassa HOM05D004290 ORTHO05D005025 1.4e-09 67.0 64 57.8
MD13G1048800 Malus domestica HOM05D004290 ORTHO05D005025 1.7e-07 60.1 51 58.8


User provided reference genes

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