Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 4.3e-71 271.2 133 100.0
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 5.3e-61 237.7 133 84.2
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 2.6e-60 235.3 127 86.6
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 3.4e-60 235.0 133 85.0
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.0e-59 233.4 127 85.0
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.3e-59 233.0 133 83.5
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 8.5e-59 230.3 133 83.5
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 1.1e-58 229.9 127 84.3
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.4e-58 229.6 127 86.6
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.9e-58 229.2 132 81.1
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.9e-58 229.2 127 83.5
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.9e-58 229.2 127 83.5
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 79.7
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 3.2e-58 228.4 133 80.5
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 3.2e-58 228.4 127 83.5
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 7.2e-58 227.3 126 84.1
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 81.2
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 82.7
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 9.4e-58 226.9 127 83.5
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.2e-57 226.5 133 82.0
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 82.0
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 79.7
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.6e-57 226.1 132 83.3
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.7e-57 225.3 127 81.9
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 79.7
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 6.1e-57 224.2 133 81.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 6.1e-57 224.2 127 80.3
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.4e-56 223.0 127 81.1
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.8e-56 222.6 127 81.1
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 81.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.0e-56 221.9 127 81.1
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.0e-56 221.9 127 81.1
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.0e-56 221.9 127 81.1
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 3.0e-56 221.9 127 82.7
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 6.7e-56 220.7 127 78.7
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 1.1e-55 219.9 140 77.9
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 80.5
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 2.5e-55 218.8 133 77.4
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 79.7
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.2e-54 215.7 133 78.9
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.8e-54 215.3 134 79.1
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 3.1e-53 211.8 133 75.2
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 75.2
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 6.9e-53 210.7 133 73.7
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 9.1e-53 210.3 139 74.8
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.5e-52 209.5 127 78.0
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 5.9e-52 207.6 133 75.2
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.0e-51 206.8 116 84.5
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 2.2e-51 205.7 113 82.3
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 3.8e-51 204.9 133 72.9
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 5.0e-51 204.5 114 80.7
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.9e-50 202.6 133 71.4
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 4.2e-50 201.4 128 72.7
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 5.5e-50 201.1 133 69.9
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 5.5e-50 201.1 133 69.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 9.4e-50 200.3 133 69.9
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 9.4e-50 200.3 114 80.7
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.2e-49 199.9 133 69.9
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 2.7e-49 198.7 127 71.7
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 3.6e-49 198.4 133 70.7
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 4.7e-49 198.0 181 58.0
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 69.9
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 69.2
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 5.1e-48 194.5 133 67.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 6.7e-48 194.1 133 66.2
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 8.8e-48 193.7 133 70.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.1e-47 193.4 128 69.5
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 3.3e-47 191.8 128 68.8
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 2.8e-46 188.7 148 66.9
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 7.0e-45 184.1 102 80.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 9.1e-45 183.7 114 75.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.6e-44 182.2 137 65.0
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 3.5e-44 181.8 105 79.0
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 4.5e-44 181.4 132 61.4
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.8e-43 178.3 98 82.7
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 1.2e-41 173.3 128 60.9
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 4.7e-41 171.4 122 66.4
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.4e-40 169.9 105 73.3
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 2.3e-40 169.1 124 58.1
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.3e-40 169.1 98 80.6
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 2.3e-40 169.1 105 74.3
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.1e-39 166.8 95 82.1
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 2.0e-39 166.0 92 81.5
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.3e-39 165.2 105 72.4
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 3.3e-39 165.2 103 71.8
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 4.2e-34 148.3 125 55.2
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 4.0e-32 141.7 111 55.9
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 1.2e-31 140.2 133 58.6
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 2.6e-31 139.0 133 58.6
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.3e-27 126.7 113 53.1
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 2.1e-25 119.4 70 78.6
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 2.3e-24 115.9 102 53.9
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 2.6e-23 112.5 118 46.6
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.4e-21 105.9 58 87.9
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 5.9e-20 101.3 109 45.0
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 7.7e-20 100.9 132 39.4
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 2.1e-17 92.8 81 51.9
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 3.2e-13 79.0 83 44.6
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 2.7e-12 75.9 47 68.1
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 3.5e-12 75.5 68 55.9
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 3.6e-09 65.5 89 37.1
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 1.8e-08 63.2 61 55.7
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 2.6e-07 59.3 36 66.7
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 4.4e-07 58.5 34 61.8


User provided reference genes

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