Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.2e-178 629.8 334 100.0
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 4.6e-77 292.4 259 61.0
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 3.9e-76 289.3 311 56.3
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 3.3e-75 286.2 250 61.6
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 9.5e-75 284.6 260 60.0
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.8e-74 283.1 249 62.2
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.8e-73 280.4 255 59.2
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.8e-73 280.4 263 60.1
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 2.3e-73 280.0 283 56.2
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 3.1e-73 279.6 256 58.6
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 4.0e-73 279.3 253 60.9
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 4.4e-72 275.8 249 59.0
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 2.9e-71 273.1 246 60.2
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 3.7e-71 272.7 280 55.4
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 6.4e-71 271.9 302 55.3
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 2.4e-70 270.0 269 56.9
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 3.2e-70 269.6 277 55.2
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.6e-69 267.3 243 60.1
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.0e-69 266.9 245 59.6
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 7.8e-69 265.0 261 57.1
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.3e-68 264.2 240 60.0
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.7e-68 263.8 300 53.3
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.7e-68 263.8 240 59.6
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.7e-68 263.8 239 59.0
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 5.0e-68 262.3 253 56.5
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 8.6e-68 261.5 256 58.2
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.1e-67 261.2 254 57.5
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.1e-67 261.2 263 55.5
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.9e-67 260.4 253 56.9
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.9e-67 260.4 254 57.1
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 4.3e-67 259.2 266 56.8
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.6e-67 258.8 250 55.6
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 7.3e-67 258.5 259 56.8
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 9.5e-67 258.1 256 55.5
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 9.5e-67 258.1 256 55.5
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 9.5e-67 258.1 258 57.4
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 2.1e-66 256.9 265 53.2
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 2.8e-66 256.5 311 50.5
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 4.0e-65 252.7 258 55.4
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 1.7e-63 247.3 317 48.6
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 4.9e-63 245.7 227 59.5
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.9e-62 243.8 279 53.0
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.1e-62 242.7 217 61.3
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.6e-61 240.7 246 53.3
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.6e-61 240.7 223 58.3
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.6e-61 240.7 315 47.9
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 6.0e-61 238.8 249 55.0
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 5.1e-60 235.7 230 56.5
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 6.6e-60 235.3 262 51.9
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 8.6e-60 235.0 270 53.0
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 8.6e-60 235.0 284 51.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 2.5e-59 233.4 249 53.0
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 7.3e-59 231.9 261 51.0
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.6e-58 230.7 224 56.2
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.8e-58 229.9 227 56.4
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.5e-56 224.2 216 57.9
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 3.8e-55 219.5 299 48.8
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.4e-54 217.6 249 50.6
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 4.1e-54 216.1 287 48.1
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 1.2e-53 214.5 240 48.3
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.7e-53 213.4 236 53.8
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.7e-52 210.7 149 71.8
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.3e-52 210.3 244 50.0
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 7.3e-51 205.3 242 50.4
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 4.7e-50 202.6 209 54.5
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.1e-46 191.4 141 70.2
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 9.3e-46 188.3 206 51.0
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 7.3e-43 178.7 242 40.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 4.5e-40 169.5 290 35.9
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 2.2e-39 167.2 245 38.8
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 1.1e-38 164.9 217 43.3
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 9.3e-38 161.8 129 62.8
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.1e-37 160.6 214 49.5
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.9e-36 156.4 246 43.5
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 3.4e-32 143.3 98 71.4
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 3.8e-31 139.8 96 76.0
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 6.4e-31 139.0 168 47.6
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.3e-28 131.3 240 37.5
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 1.8e-28 131.0 155 49.7
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 3.9e-28 129.8 89 68.5
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.3e-26 124.8 142 50.0
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 2.8e-26 123.6 95 62.1
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 2.2e-15 87.4 61 67.2
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 5.5e-14 82.8 59 69.5
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 7.2e-14 82.4 231 26.4
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.3e-12 77.4 63 60.3
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 3.0e-12 77.0 231 25.1
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 5.1e-12 76.3 65 61.5
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 2.5e-11 73.9 114 43.0
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 3.7e-10 70.1 65 55.4
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 1.2e-08 65.1 51 66.7
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 2.0e-08 64.3 50 64.0
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 2.2e-07 60.8 51 60.8


User provided reference genes

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