Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043982.1 Olea europaea HOM05D003797 ORTHO05D004370 1.6e-30 135.6 75 100.0
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 9.7e-28 126.3 74 93.2
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 9.7e-28 126.3 74 93.2
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 1.3e-27 125.9 74 90.5
Solyc04g008060.3 Solanum lycopersicum HOM05D003797 ORTHO05D004370 1.7e-27 125.6 74 93.2
Sopen04g003210 Solanum pennellii HOM05D003797 ORTHO05D004370 1.7e-27 125.6 74 93.2
PGSC0003DMG400029467 Solanum tuberosum HOM05D003797 ORTHO05D004370 1.7e-27 125.6 74 93.2
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 3.7e-27 124.4 74 89.2
CAN.G74.19 Capsicum annuum HOM05D003797 ORTHO05D004370 1.1e-26 122.9 74 90.5
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 1.4e-26 122.5 71 94.4
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.4e-26 122.5 73 93.2
SalBow2G0350 Salvia bowleyana HOM05D003797 ORTHO05D004370 1.4e-26 122.5 74 87.8
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 1.8e-26 122.1 74 87.8
Dinv06119 Davidia involucrata HOM05D003797 ORTHO05D004370 4.1e-26 120.9 71 93.0
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 7.0e-26 120.2 74 90.5
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 9.1e-26 119.8 73 91.8
EL10Ac8g20121 Beta vulgaris HOM05D003797 ORTHO05D004370 9.1e-26 119.8 73 91.8
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.2e-25 119.4 73 87.7
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 1.2e-25 119.4 71 90.1
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 1.2e-25 119.4 69 92.8
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 1.2e-25 119.4 69 92.8
COL.COLO4_27615 Corchorus olitorius HOM05D003797 ORTHO05D004370 1.5e-25 119.0 66 97.0
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 1.5e-25 119.0 72 90.3
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 2.0e-25 118.6 71 91.5
TAR629G0971 Trochodendron aralioides HOM05D003797 ORTHO05D004370 2.0e-25 118.6 71 90.1
Cc11_g06660 Coffea canephora HOM05D003797 ORTHO05D004370 2.6e-25 118.2 74 87.8
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 2.6e-25 118.2 71 90.1
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 3.5e-25 117.9 71 91.5
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 3.5e-25 117.9 66 95.5
CiPaw.06G054700 Carya illinoinensis HOM05D003797 ORTHO05D004370 3.5e-25 117.9 66 95.5
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 3.5e-25 117.9 69 89.9
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 3.5e-25 117.9 69 89.9
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 4.5e-25 117.5 69 91.3
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 4.5e-25 117.5 69 91.3
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 4.5e-25 117.5 71 88.7
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 5.9e-25 117.1 69 89.9
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 5.9e-25 117.1 69 89.9
Ciclev10016475m.g Citrus clementina HOM05D003797 ORTHO05D004370 7.7e-25 116.7 69 88.4
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 7.7e-25 116.7 69 89.9
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 7.7e-25 116.7 71 88.7
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 1.0e-24 116.3 69 89.9
Atru.chr11.846 Acer truncatum HOM05D003797 ORTHO05D004370 1.0e-24 116.3 69 89.9
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 1.0e-24 116.3 69 89.9
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 1.0e-24 116.3 71 87.3
Gohir.D13G026400 Gossypium hirsutum HOM05D003797 ORTHO05D004370 1.0e-24 116.3 69 88.4
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 1.0e-24 116.3 69 88.4
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.3e-24 115.9 71 85.9
FAN12G0353 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.3e-24 115.9 71 85.9
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.3e-24 115.9 71 85.9
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.3e-24 115.9 71 85.9
Prupe.1G335200 Prunus persica HOM05D003797 ORTHO05D004370 1.3e-24 115.9 69 89.9
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 1.3e-24 115.9 71 88.7
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 1.7e-24 115.5 69 89.9
Psat7g007520 Pisum sativum HOM05D003797 ORTHO05D004370 1.7e-24 115.5 69 89.9
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 1.7e-24 115.5 66 92.4
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 1.7e-24 115.5 69 89.9
TWI74G1086 Tripterygium wilfordii HOM05D003797 ORTHO05D004370 1.7e-24 115.5 69 89.9
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 2.2e-24 115.2 67 92.5
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 2.9e-24 114.8 66 92.4
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 2.9e-24 114.8 66 92.4
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 2.9e-24 114.8 66 93.9
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 2.9e-24 114.8 66 93.9
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 2.9e-24 114.8 69 88.4
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 3.8e-24 114.4 71 87.3
AL5G10900 Arabidopsis lyrata HOM05D003797 ORTHO05D004370 3.8e-24 114.4 69 89.9
BraA06t27283Z Brassica rapa HOM05D003797 ORTHO05D004370 3.8e-24 114.4 69 91.3
Thhalv10005591m.g Eutrema salsugineum HOM05D003797 ORTHO05D004370 3.8e-24 114.4 69 89.9
MD16G1016600 Malus domestica HOM05D003797 ORTHO05D004370 3.8e-24 114.4 69 88.4
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 3.8e-24 114.4 69 88.4
GSVIVG01011629001 Vitis vinifera HOM05D003797 ORTHO05D004370 3.8e-24 114.4 66 93.9
BcaB07g30374 Brassica carinata HOM05D003797 ORTHO05D004370 5.0e-24 114.0 69 88.4
BcaC03g17074 Brassica carinata HOM05D003797 ORTHO05D004370 5.0e-24 114.0 69 88.4
A02p32320 Brassica napus HOM05D003797 ORTHO05D004370 5.0e-24 114.0 69 88.4
C02p49920 Brassica napus HOM05D003797 ORTHO05D004370 5.0e-24 114.0 69 88.4
BolC2t11071H Brassica oleracea HOM05D003797 ORTHO05D004370 5.0e-24 114.0 69 88.4
BraA02t08249Z Brassica rapa HOM05D003797 ORTHO05D004370 5.0e-24 114.0 69 88.4
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 5.0e-24 114.0 72 86.1
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 5.0e-24 114.0 72 84.7
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 5.0e-24 114.0 67 91.0
Zm00001eb099150 Zea mays HOM05D003797 ORTHO05D004370 5.0e-24 114.0 72 83.3
ClCG07G005420 Citrullus lanatus HOM05D003797 ORTHO05D004370 6.5e-24 113.6 69 88.4
CsaV3_5G014530 Cucumis sativus L. HOM05D003797 ORTHO05D004370 6.5e-24 113.6 69 88.4
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 6.5e-24 113.6 70 87.1
Zm00001eb312010 Zea mays HOM05D003797 ORTHO05D004370 6.5e-24 113.6 72 83.3
AT2G01770 Arabidopsis thaliana HOM05D003797 ORTHO05D004370 8.5e-24 113.2 69 88.4
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 8.5e-24 113.2 69 88.4
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 8.5e-24 113.2 69 88.4
PSO675G5697 Papaver somniferum HOM05D003797 ORTHO05D004370 8.5e-24 113.2 74 81.1
PSO732G0533 Papaver somniferum HOM05D003797 ORTHO05D004370 8.5e-24 113.2 74 81.1
Sp2g13230 Schrenkiella parvula HOM05D003797 ORTHO05D004370 1.1e-23 112.8 66 92.4
BcaC06g31278 Brassica carinata HOM05D003797 ORTHO05D004370 1.4e-23 112.5 69 89.9
CARHR144350 Cardamine hirsuta HOM05D003797 ORTHO05D004370 1.4e-23 112.5 69 87.0
MD13G1018700 Malus domestica HOM05D003797 ORTHO05D004370 1.4e-23 112.5 69 87.0
Os09g0396900 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 1.4e-23 112.5 72 81.9
Phvul.002G323700 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.4e-23 112.5 67 89.6
Hund23441 Selenicereus undatus HOM05D003797 ORTHO05D004370 1.4e-23 112.5 66 89.4
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 1.4e-23 112.5 74 79.7
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.9e-23 112.1 69 85.5
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 1.9e-23 112.1 74 78.4
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 2.5e-23 111.7 69 85.5
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 2.5e-23 111.7 69 87.0
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 2.5e-23 111.7 77 83.1
PSO732G0427 Papaver somniferum HOM05D003797 ORTHO05D004370 3.2e-23 111.3 74 79.7
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 3.2e-23 111.3 69 85.5
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 4.2e-23 110.9 69 85.5
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 4.2e-23 110.9 66 89.4
MBI19_g09381_MAGBIO Magnolia biondii HOM05D003797 ORTHO05D004370 5.5e-23 110.5 65 90.8
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 5.5e-23 110.5 66 87.9
THA.LOC104823632 Tarenaya hassleriana HOM05D003797 ORTHO05D004370 5.5e-23 110.5 69 82.6
Aa31LG2G8120 Aethionema arabicum HOM05D003797 ORTHO05D004370 7.2e-23 110.2 66 87.9
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 9.4e-23 109.8 71 80.3
Nn3g18415 Nelumbo nucifera HOM05D003797 ORTHO05D004370 9.4e-23 109.8 68 83.8
VMungo0251G0608 Vigna mungo HOM05D003797 ORTHO05D004370 1.6e-22 109.0 69 84.1
PSO675G2134 Papaver somniferum HOM05D003797 ORTHO05D004370 2.1e-22 108.6 74 78.4
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 2.7e-22 108.2 71 80.3
Medtr8g105810 Medicago truncatula HOM05D003797 ORTHO05D004370 3.6e-22 107.8 66 86.4
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 3.6e-22 107.8 71 81.7
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 4.7e-22 107.5 71 81.7
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 1.0e-21 106.3 74 79.7
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 1.4e-21 105.9 71 81.7
Dinv03968 Davidia involucrata HOM05D003797 ORTHO05D004370 1.4e-21 105.9 71 81.7
Nn3g18418 Nelumbo nucifera HOM05D003797 ORTHO05D004370 1.4e-21 105.9 71 83.1
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 2.3e-21 105.1 71 77.5
unitig_27.g25168 Utricularia gibba HOM05D003797 ORTHO05D004370 2.3e-21 105.1 71 76.1
CSS0024034 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 3.0e-21 104.8 70 82.9
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 3.0e-21 104.8 62 88.7
SEGI_33821 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 6.7e-21 103.6 62 87.1
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 8.8e-21 103.2 71 78.9
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 8.8e-21 103.2 71 78.9
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 8.8e-21 103.2 71 78.9
HPP92_023452 Vanilla planifolia HOM05D003797 ORTHO05D004370 1.5e-20 102.4 68 79.4
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 2.6e-20 101.7 71 77.5
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.6e-20 101.7 71 77.5
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 3.3e-20 101.3 71 77.5
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 3.3e-20 101.3 71 76.1
RcHm_v2.0_Chr4g0442581 Rosa chinensis HOM05D003797 ORTHO05D004370 3.3e-20 101.3 71 76.1
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 4.4e-20 100.9 65 81.5
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 4.4e-20 100.9 71 76.1
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 4.4e-20 100.9 71 76.1
MD16G1016500 Malus domestica HOM05D003797 ORTHO05D004370 4.4e-20 100.9 71 76.1
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 4.4e-20 100.9 71 76.1
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 5.7e-20 100.5 83 69.9
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 5.7e-20 100.5 71 76.1
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 7.4e-20 100.1 71 74.6
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 7.4e-20 100.1 74 68.9
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 7.4e-20 100.1 71 77.5
Haze_10850 Corylus avellana HOM05D003797 ORTHO05D004370 9.7e-20 99.8 71 78.9
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 9.7e-20 99.8 71 74.6
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 9.7e-20 99.8 71 74.6
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 1.3e-19 99.4 66 81.8
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 2.2e-19 98.6 71 76.1
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis HOM05D003797 ORTHO05D004370 3.7e-19 97.8 69 73.9
Pp3c2_34540 Physcomitrium patens HOM05D003797 ORTHO05D004370 4.8e-19 97.4 62 79.0
Mapoly0116s0023 Marchantia polymorpha HOM05D003797 ORTHO05D004370 8.2e-19 96.7 64 76.6
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 3.5e-17 91.3 64 75.0
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 3.5e-17 91.3 69 71.0
SMO169G0175 Selaginella moellendorffii HOM05D003797 ORTHO05D004370 4.5e-17 90.9 62 74.2
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 3.8e-16 87.8 76 64.5
CANSAT78G1255 Cannabis sativa HOM05D003797 ORTHO05D004370 6.5e-16 87.0 57 80.7
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 2.5e-15 85.1 76 63.2
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 9.4e-15 83.2 59 74.6
SEGI_39927 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 2.3e-13 78.6 60 71.7
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.5e-12 75.9 72 58.3
unitig_52.g17091 Utricularia gibba HOM05D003797 ORTHO05D004370 7.5e-12 73.6 51 70.6
unitig_29.g31879 Utricularia gibba HOM05D003797 ORTHO05D004370 4.5e-09 64.3 40 72.5
VMungo0540G0471 Vigna mungo HOM05D003797 ORTHO05D437409 3.6e-06 54.7 60 60.0


User provided reference genes

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