Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043928.1 Olea europaea HOM05D005934 ORTHO05D005165 6.8e-192 674.1 411 100.0
Nitab4.5_0008994g0010 Nicotiana tabacum HOM05D005934 ORTHO05D005165 1.3e-113 414.1 414 62.1
MSTRG.27465 Avicennia marina HOM05D005934 ORTHO05D005165 2.3e-110 403.3 409 65.5
Nitab4.5_0000233g0170 Nicotiana tabacum HOM05D005934 ORTHO05D005165 5.6e-109 398.7 432 58.6
CAN.G471.3 Capsicum annuum HOM05D005934 ORTHO05D005165 6.1e-108 395.2 411 61.6
Duzib114G0889 Durio zibethinus HOM05D005934 ORTHO05D005165 9.2e-104 381.3 436 56.7
CSS0026746 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 8.6e-102 374.8 431 56.1
Solyc04g047750.3 Solanum lycopersicum HOM05D005934 ORTHO05D005165 8.6e-102 374.8 403 58.1
Prupe.2G216000 Prunus persica HOM05D005934 ORTHO05D005165 1.5e-101 374.0 438 54.6
Migut.F01993 Erythranthe guttata HOM05D005934 ORTHO05D005165 1.9e-101 373.6 401 63.3
Sopen04g017890 Solanum pennellii HOM05D005934 ORTHO05D005165 4.3e-101 372.5 403 57.8
RcHm_v2.0_Chr1g0363881 Rosa chinensis HOM05D005934 ORTHO05D005165 2.1e-100 370.2 464 54.7
CSS0015713 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 3.6e-100 369.4 449 58.4
FAN01G0846 Fragaria x ananassa HOM05D005934 ORTHO05D005165 8.0e-100 368.2 450 52.7
Gohir.D05G297500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 8.0e-100 368.2 435 54.3
SGA_v2.0_scaffold13G06359 Striga asiatica HOM05D005934 ORTHO05D005165 1.0e-99 367.9 420 60.0
FAN01G1479 Fragaria x ananassa HOM05D005934 ORTHO05D005165 2.3e-99 366.7 426 54.9
Gorai.009G314800 Gossypium raimondii HOM05D005934 ORTHO05D005165 5.2e-99 365.5 435 53.8
CANSAT56G0550 Cannabis sativa HOM05D005934 ORTHO05D005165 8.9e-99 364.8 442 54.8
MD01G1111100 Malus domestica HOM05D005934 ORTHO05D005165 8.9e-99 364.8 462 51.7
Atru.chr12.720 Acer truncatum HOM05D005934 ORTHO05D005165 1.5e-98 364.0 446 54.0
Phvul.007G092600 Phaseolus vulgaris HOM05D005934 ORTHO05D005165 2.6e-98 363.2 436 54.1
Eucgr.G02812 Eucalyptus grandis HOM05D005934 ORTHO05D005165 1.3e-97 360.9 429 55.0
Gohir.A05G297600 Gossypium hirsutum HOM05D005934 ORTHO05D005165 1.7e-97 360.5 435 53.3
unitig_899.g14449 Utricularia gibba HOM05D005934 ORTHO05D005165 2.9e-97 359.8 412 58.0
FAN03G0840 Fragaria x ananassa HOM05D005934 ORTHO05D005165 3.7e-97 359.4 460 52.0
FvH4_7g19882 Fragaria vesca HOM05D005934 ORTHO05D005165 8.3e-97 358.2 460 52.0
Gohir.A05G345500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 1.4e-96 357.5 423 54.6
arahy.Tifrunner.gnm1.ann1.H195MC Arachis hypogaea HOM05D005934 ORTHO05D005165 2.4e-96 356.7 437 53.1
Lj5g0021458 Lotus japonicus HOM05D005934 ORTHO05D005165 2.4e-96 356.7 449 53.0
TPR.G1756 Trifolium pratense HOM05D005934 ORTHO05D005165 5.4e-96 355.5 435 53.3
Lalb_Chr02g0141961 Lupinus albus HOM05D005934 ORTHO05D005165 9.2e-96 354.8 434 59.4
QL08p056591 Quercus lobata HOM05D005934 ORTHO05D005165 1.2e-95 354.4 478 50.6
FAN10G0472 Fragaria x ananassa HOM05D005934 ORTHO05D005165 2.7e-95 353.2 457 52.3
Gohir.D04G084700 Gossypium hirsutum HOM05D005934 ORTHO05D005165 1.3e-94 350.9 423 53.9
Medtr1g095640 Medicago truncatula HOM05D005934 ORTHO05D005165 2.3e-94 350.1 426 53.8
Haze_16922 Corylus avellana HOM05D005934 ORTHO05D005165 3.0e-94 349.7 443 52.8
PGR142G2623 Punica granatum HOM05D005934 ORTHO05D005165 3.3e-93 346.3 454 53.1
Thecc.10G070000 Theobroma cacao HOM05D005934 ORTHO05D005165 4.3e-93 345.9 436 53.2
Cc02_g11420 Coffea canephora HOM05D005934 ORTHO05D005165 7.3e-93 345.1 405 54.8
Ciclev10031457m.g Citrus clementina HOM05D005934 ORTHO05D005165 1.6e-92 344.0 459 53.2
Dinv31355 Davidia involucrata HOM05D005934 ORTHO05D005165 3.6e-92 342.8 465 55.7
MD07G1177300 Malus domestica HOM05D005934 ORTHO05D005165 3.6e-92 342.8 461 52.3
Thhalv10013687m.g Eutrema salsugineum HOM05D005934 ORTHO05D005165 1.4e-91 340.9 427 51.5
PSO339G5008 Papaver somniferum HOM05D005934 ORTHO05D005165 1.8e-91 340.5 449 49.4
TWI38G0616 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 1.8e-91 340.5 457 51.9
arahy.Tifrunner.gnm1.ann1.W2M3W6 Arachis hypogaea HOM05D005934 ORTHO05D005165 1.2e-90 337.8 439 51.7
Ca_10584_v3 Cicer arietinum L. HOM05D005934 ORTHO05D005165 2.0e-90 337.0 434 52.1
CSS0046829 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 2.6e-90 336.7 431 52.7
CiPaw.02G175500 Carya illinoinensis HOM05D005934 ORTHO05D005165 3.4e-90 336.3 281 68.3
Psat6g182920 Pisum sativum HOM05D005934 ORTHO05D005165 3.4e-90 336.3 424 54.7
Aqoxy2G01769 Aquilegia oxysepala HOM05D005934 ORTHO05D005165 5.8e-90 335.5 411 51.6
Sed0003296 Sechium edule HOM05D005934 ORTHO05D005165 2.2e-89 333.6 433 50.3
Carub.0008s1083 Capsella rubella HOM05D005934 ORTHO05D005165 8.3e-89 331.6 413 51.8
AT5G50840 Arabidopsis thaliana HOM05D005934 ORTHO05D005165 3.2e-88 329.7 409 51.6
GSVIVG01016314001 Vitis vinifera HOM05D005934 ORTHO05D005165 1.2e-87 327.8 422 55.7
C03p19490 Brassica napus HOM05D005934 ORTHO05D005165 3.5e-87 326.2 425 52.2
Sp6g12980 Schrenkiella parvula HOM05D005934 ORTHO05D005165 4.6e-87 325.9 419 52.3
PSO541G4936 Papaver somniferum HOM05D005934 ORTHO05D005165 1.0e-86 324.7 445 47.4
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 1.0e-86 324.7 400 53.0
C02p20680 Brassica napus HOM05D005934 ORTHO05D005165 3.0e-86 323.2 397 51.6
BolC2t08210H Brassica oleracea HOM05D005934 ORTHO05D005165 3.0e-86 323.2 397 51.6
BolC3t14330H Brassica oleracea HOM05D005934 ORTHO05D005165 3.0e-86 323.2 416 50.2
CARHR257410 Cardamine hirsuta HOM05D005934 ORTHO05D005165 3.0e-86 323.2 407 52.3
AL8G25010 Arabidopsis lyrata HOM05D005934 ORTHO05D005165 1.5e-85 320.9 412 52.2
BcaC03g14634 Brassica carinata HOM05D005934 ORTHO05D005165 1.5e-85 320.9 395 50.6
Glyma.20G178100 Glycine max HOM05D005934 ORTHO05D005165 1.5e-85 320.9 441 49.7
A03p16560 Brassica napus HOM05D005934 ORTHO05D005165 1.9e-85 320.5 413 51.3
BraA03t10943Z Brassica rapa HOM05D005934 ORTHO05D005165 1.9e-85 320.5 413 51.3
TAR636G3344 Trochodendron aralioides HOM05D005934 ORTHO05D005165 3.3e-85 319.7 478 51.0
Manes.10G044200 Manihot esculenta HOM05D005934 ORTHO05D005165 4.3e-85 319.3 425 51.5
Cpa.g.sc53.46 Carica papaya HOM05D005934 ORTHO05D005165 1.4e-83 314.3 466 47.6
BraA02t06319Z Brassica rapa HOM05D005934 ORTHO05D005165 3.1e-83 313.2 423 48.0
COL.COLO4_23717 Corchorus olitorius HOM05D005934 ORTHO05D005165 3.1e-83 313.2 438 49.1
Dinv11795 Davidia involucrata HOM05D005934 ORTHO05D005165 1.5e-82 310.8 436 55.3
Sc09g0006590 Simmondsia chinensis HOM05D005934 ORTHO05D005165 4.4e-82 309.3 456 48.0
BcaB05g24030 Brassica carinata HOM05D005934 ORTHO05D005165 3.7e-81 306.2 403 49.6
EL10Ac2g03586 Beta vulgaris HOM05D005934 ORTHO05D005165 8.4e-81 305.1 494 44.3
vmacro07085 Vaccinium macrocarpon HOM05D005934 ORTHO05D005165 5.4e-80 302.4 652 39.0
A02p12610 Brassica napus HOM05D005934 ORTHO05D005165 1.6e-79 300.8 382 49.2
Ah.11g043450 Amaranthus hybridus HOM05D005934 ORTHO05D005165 2.3e-78 297.0 422 47.6
TWI63G0603 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 4.3e-77 292.7 457 46.8
ATR0759G024 Amborella trichopoda HOM05D005934 ORTHO05D005165 3.6e-76 289.7 269 59.1
Potri.010G219700 Populus trichocarpa HOM05D005934 ORTHO05D005165 3.1e-75 286.6 459 50.8
ClCG09G020550 Citrullus lanatus HOM05D005934 ORTHO05D005165 5.2e-75 285.8 457 45.7
THA.LOC104819151 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.5e-74 284.3 425 51.8
Sabra10G0169500 Salix brachista HOM05D005934 ORTHO05D005165 2.6e-74 283.5 460 49.8
Gorai.012G094400 Gossypium raimondii HOM05D005934 ORTHO05D005165 1.4e-72 277.7 340 54.1
Os03g0288600 Oryza sativa ssp. japonica HOM05D005934 ORTHO05D005165 1.9e-72 277.3 414 44.0
HanXRQChr14g0457271 Helianthus annuus HOM05D005934 ORTHO05D005165 3.2e-72 276.6 443 50.6
ECA238G0735 Erigeron canadensis HOM05D005934 ORTHO05D005165 7.1e-72 275.4 441 49.4
HanXRQChr11g0323311 Helianthus annuus HOM05D005934 ORTHO05D005165 7.1e-72 275.4 452 49.1
MELO3C002886.2 Cucumis melo HOM05D005934 ORTHO05D005165 8.7e-70 268.5 292 63.7
AUR62027949 Chenopodium quinoa HOM05D005934 ORTHO05D005165 5.6e-69 265.8 524 41.2
Zm00001eb397090 Zea mays HOM05D005934 ORTHO05D005165 1.4e-67 261.2 398 43.0
CsaV3_5G025820 Cucumis sativus L. HOM05D005934 ORTHO05D005165 2.4e-67 260.4 465 47.1
Hund19343 Selenicereus undatus HOM05D005934 ORTHO05D005165 6.9e-67 258.8 407 46.4
TAR633G0441 Trochodendron aralioides HOM05D005934 ORTHO05D005165 2.6e-66 256.9 475 46.1
Zm00001eb013240 Zea mays HOM05D005934 ORTHO05D005165 3.2e-64 250.0 267 59.2
Aa31LG3G7310 Aethionema arabicum HOM05D005934 ORTHO05D005165 4.2e-64 249.6 413 49.9
DCAR_003640 Daucus carota HOM05D005934 ORTHO05D005165 1.2e-63 248.1 233 71.7
AUR62020763 Chenopodium quinoa HOM05D005934 ORTHO05D005165 2.5e-61 240.4 473 43.3
Lsat_1_v5_gn_2_113761 Lactuca sativa HOM05D005934 ORTHO05D005165 8.1e-60 235.3 437 47.8
Lj1C919T16 Lonicera japonica HOM05D005934 ORTHO05D005165 2.0e-58 230.7 260 56.2
Hund22502 Selenicereus undatus HOM05D005934 ORTHO05D005165 5.5e-56 222.6 280 61.4
Aa31LG3G7290 Aethionema arabicum HOM05D005934 ORTHO05D005165 2.1e-55 220.7 325 46.5
SMO201G0134 Selaginella moellendorffii HOM05D005934 ORTHO05D005165 5.1e-46 189.5 258 45.0
Mapoly0007s0101 Marchantia polymorpha HOM05D005934 ORTHO05D005165 1.3e-44 184.9 280 43.9
CBR_g15990 Chara braunii HOM05D005934 ORTHO05D005165 5.5e-40 169.5 382 34.8
MBI05_g20541_MAGBIO Magnolia biondii HOM05D005934 ORTHO05D005165 1.4e-35 154.8 471 37.8
HPP92_006750 Vanilla planifolia HOM05D005934 ORTHO05D005165 6.1e-31 139.4 234 41.0
Actinidia38257 Actinidia chinensis HOM05D005934 ORTHO05D005165 1.1e-29 135.2 466 36.7
Pp3c11_23150 Physcomitrium patens HOM05D005934 ORTHO05D005165 1.5e-29 134.8 283 36.7
THA.LOC104819150 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.4e-27 128.3 165 63.0
Peaxi162Scf00108g01217 Petunia axillaris HOM05D005934 ORTHO05D005165 6.9e-27 125.9 333 35.1
A03p42390 Brassica napus HOM05D005934 ORTHO05D005165 9.4e-24 115.5 93 67.7
BraA03t13391Z Brassica rapa HOM05D005934 ORTHO05D005165 9.4e-24 115.5 93 67.7
SalBow4G0998 Salvia bowleyana HOM05D011515 ORTHO05D005165 2.2e-17 94.4 93 57.0
SalBow4G2489 Salvia bowleyana HOM05D011515 ORTHO05D005165 2.2e-17 94.4 93 57.0
Lsat_1_v5_gn_1_128800 Lactuca sativa HOM05D005934 ORTHO05D005165 1.6e-15 88.2 183 48.6
Nn2g10703 Nelumbo nucifera HOM05D005934 ORTHO05D005165 1.6e-15 88.2 63 73.0
Peaxi162Scf00108g01212 Petunia axillaris HOM05D005934 ORTHO05D005165 1.8e-14 84.7 164 52.4
Actinidia03038 Actinidia chinensis HOM05D005934 ORTHO05D005165 4.4e-13 80.1 156 53.2
Medtr1g101870 Medicago truncatula HOM05D000280 ORTHO05D000632 2.4e-11 74.3 50 78.0
MCO09G455 Micromonas commoda HOM05D005934 ORTHO05D005165 2.2e-09 67.8 251 27.5
Cre12.g546300 Chlamydomonas reinhardtii HOM05D005934 ORTHO05D005165 4.2e-08 63.5 238 28.6


User provided reference genes

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