Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 6.0e-92 340.9 179 100.0
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 9.2e-85 317.0 180 93.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 7.1e-77 290.8 170 87.1
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.1e-76 289.3 181 86.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.3e-75 285.8 180 84.4
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 3.9e-75 285.0 181 84.5
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 3.9e-75 285.0 181 84.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.9e-74 282.7 180 83.3
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 4.3e-74 281.6 166 87.3
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.6e-73 278.5 170 87.1
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 3.6e-73 278.5 180 81.7
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 4.0e-72 275.0 157 89.8
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 4.0e-72 275.0 166 85.5
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 5.3e-72 274.6 179 81.0
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.2e-71 273.5 177 79.7
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 3.4e-71 271.9 179 78.8
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 4.5e-71 271.6 179 81.0
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 7.6e-71 270.8 179 81.6
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 9.9e-71 270.4 177 78.5
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 9.9e-71 270.4 179 77.7
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.3e-70 270.0 179 78.2
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.7e-70 269.6 179 77.1
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 3.8e-70 268.5 179 80.4
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 4.9e-70 268.1 179 77.1
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 8.4e-70 267.3 177 78.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.4e-69 266.5 180 78.3
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.4e-69 265.8 179 77.1
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.4e-69 265.8 179 77.7
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.2e-69 265.0 179 76.5
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 7.1e-69 264.2 179 75.4
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 9.3e-69 263.8 179 79.9
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.2e-68 263.5 179 75.4
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.5e-68 261.9 179 76.0
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.5e-68 261.9 175 78.9
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.6e-68 261.5 177 75.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 4.6e-68 261.5 179 79.9
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.0e-68 261.2 175 78.9
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 7.9e-68 260.8 179 74.9
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.0e-67 260.4 179 74.9
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.0e-67 260.4 175 78.3
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.0e-67 260.4 173 76.3
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.3e-67 260.0 179 76.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.3e-67 260.0 179 75.4
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.3e-67 260.0 179 75.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 1.8e-67 259.6 151 87.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 3.0e-67 258.8 160 83.1
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 3.0e-67 258.8 179 73.7
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.9e-67 258.5 179 76.0
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.9e-67 258.5 179 76.0
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.9e-67 258.5 179 76.0
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 5.1e-67 258.1 180 74.4
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 6.7e-67 257.7 153 86.3
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.7e-67 257.7 179 74.9
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 8.7e-67 257.3 179 74.3
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 8.7e-67 257.3 179 74.3
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 8.7e-67 257.3 179 75.4
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.7e-67 257.3 180 76.1
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.1e-66 256.9 154 82.5
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.1e-66 256.9 179 75.4
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.5e-66 256.5 180 76.1
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.5e-66 256.5 179 77.1
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.9e-66 256.1 179 72.6
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.9e-66 256.1 179 75.4
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.9e-66 256.1 162 80.2
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.5e-66 255.8 178 74.2
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.3e-66 255.0 180 75.6
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 5.6e-66 254.6 179 72.6
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 7.4e-66 254.2 179 73.2
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.4e-66 254.2 179 73.2
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 7.4e-66 254.2 179 73.7
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 9.6e-66 253.8 181 74.6
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.3e-65 253.4 177 71.8
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.3e-65 253.4 169 74.6
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 2.8e-65 252.3 169 74.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.8e-65 252.3 167 80.8
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 2.8e-65 252.3 180 73.9
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 2.8e-65 252.3 180 73.9
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 2.8e-65 252.3 180 73.9
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 3.7e-65 251.9 179 73.2
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 3.7e-65 251.9 179 73.2
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 6.2e-65 251.1 179 70.9
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 6.2e-65 251.1 179 70.9
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 6.2e-65 251.1 179 70.9
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 8.1e-65 250.8 179 72.1
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 8.1e-65 250.8 177 72.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.1e-64 250.4 179 70.9
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.1e-64 250.4 153 81.7
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.5e-63 246.5 162 77.2
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 2.0e-63 246.1 179 69.8
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.6e-63 245.7 147 83.0
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.5e-63 245.0 178 72.5
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 4.5e-63 245.0 180 70.6
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.3e-62 243.4 170 73.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.7e-62 243.0 153 81.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 4.9e-62 241.5 151 78.1
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.1e-61 240.4 167 76.0
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.2e-61 238.8 176 73.3
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.1e-60 236.1 178 70.2
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 2.7e-60 235.7 157 75.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 1.3e-59 233.4 150 78.0
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.3e-59 232.6 165 71.5
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.3e-59 232.6 157 75.8
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.3e-59 232.6 157 79.0
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 5.1e-59 231.5 178 69.7
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.1e-57 226.1 178 65.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.8e-57 225.7 138 80.4
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.0e-54 217.2 167 68.9
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 4.2e-53 211.8 131 80.2
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 9.3e-53 210.7 152 69.7
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 9.3e-53 210.7 152 72.4
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.3e-51 206.1 153 66.7
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.5e-50 203.4 129 81.4
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.9e-50 203.0 118 84.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 4.3e-50 201.8 159 67.9
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 4.1e-48 195.3 120 80.8
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 3.4e-47 192.2 154 64.9
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 5.9e-47 191.4 121 83.5
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.1e-45 187.2 107 85.0
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 4.2e-45 185.3 152 61.2
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 9.4e-45 184.1 131 69.5
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 2.7e-44 182.6 108 84.3
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 4.6e-44 181.8 107 84.1
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 5.3e-40 168.3 129 69.0
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.8e-35 153.3 91 83.5
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 8.5e-30 134.4 123 50.4
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 5.7e-18 95.1 106 56.6
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.3e-09 67.4 118 42.4


User provided reference genes

Program Settings