Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 0.0e+00 1787.7 915 100.0
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 3.2e-213 746.1 638 61.0
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 8.6e-203 711.4 637 58.2
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.8e-200 703.7 634 58.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.3e-200 703.4 567 62.3
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.2e-199 701.0 631 58.0
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 2.2e-198 696.8 634 57.9
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 5.4e-197 692.2 594 61.1
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 7.1e-197 691.8 655 55.9
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 3.0e-195 686.4 622 57.9
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 3.3e-194 682.9 654 56.4
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.6e-194 682.2 622 57.6
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 2.0e-191 673.7 623 57.8
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 2.7e-188 663.3 623 54.4
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 6.6e-187 658.7 606 56.9
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 8.7e-187 658.3 648 55.4
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 5.8e-183 645.6 507 64.5
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 1.9e-181 640.6 580 56.4
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 1.6e-180 637.5 637 55.1
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 1.3e-179 634.4 639 53.4
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 3.6e-177 626.3 591 53.5
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 2.0e-175 620.5 585 54.9
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 4.5e-175 619.4 655 51.5
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 7.6e-175 618.6 606 54.0
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 6.4e-174 615.5 585 55.6
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 7.1e-173 612.1 455 67.5
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.5e-172 609.8 519 59.9
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 4.6e-172 609.4 647 53.8
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 1.8e-171 607.4 633 51.5
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 5.6e-170 602.4 593 54.0
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 9.6e-170 601.7 585 53.8
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 6.2e-169 599.0 441 68.7
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 6.9e-168 595.5 668 51.2
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 9.0e-168 595.1 471 63.5
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 9.9e-167 591.7 509 59.1
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 2.9e-166 590.1 634 50.8
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.4e-165 587.8 635 50.2
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 3.2e-165 586.6 634 50.0
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.5e-164 583.2 634 50.2
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 3.3e-162 576.6 448 63.6
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 2.8e-161 573.5 465 63.0
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 1.1e-160 571.6 635 49.8
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 2.4e-160 570.5 635 49.4
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 5.8e-159 565.8 589 51.4
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 2.9e-158 563.5 667 48.9
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 8.4e-158 562.0 479 60.3
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 5.5e-157 559.3 547 50.8
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 1.2e-156 558.1 444 62.8
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 7.9e-156 555.4 476 59.5
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 1.0e-155 555.1 581 50.8
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 1.1e-154 551.6 634 48.3
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 3.3e-154 550.1 580 50.3
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.4e-152 543.9 605 51.2
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 3.2e-149 533.5 502 55.8
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 4.6e-148 529.6 564 52.5
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 7.9e-148 528.9 554 50.7
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 2.5e-146 523.9 618 46.3
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 9.1e-144 515.4 436 59.9
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 7.7e-143 512.3 412 62.4
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 3.8e-142 510.0 436 59.6
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 3.2e-141 506.9 474 55.5
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 1.2e-140 505.0 473 55.8
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 3.3e-138 496.9 621 45.6
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 1.7e-137 494.6 655 43.4
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 3.1e-136 490.3 552 46.0
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 3.1e-136 490.3 549 46.4
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 3.5e-135 486.9 558 45.7
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 4.5e-135 486.5 588 43.9
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 1.7e-134 484.6 493 54.2
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 8.8e-131 472.2 621 43.2
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 8.8e-131 472.2 621 43.2
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 2.8e-129 467.2 591 43.5
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 1.1e-128 465.3 548 45.3
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 1.8e-128 464.5 540 45.9
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 1.8e-128 464.5 445 58.7
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 3.1e-128 463.8 540 45.9
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 2.0e-127 461.1 619 43.9
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 2.0e-127 461.1 430 57.7
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 7.7e-127 459.1 379 58.8
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.6e-124 451.4 602 43.4
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 2.7e-124 450.7 347 62.0
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 6.1e-124 449.5 339 63.1
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 8.0e-124 449.1 392 55.1
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 5.2e-123 446.4 466 48.5
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 7.5e-122 442.6 583 43.1
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 8.0e-116 422.5 527 43.8
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.8e-115 421.4 497 46.7
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 3.7e-113 413.7 453 48.1
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 1.4e-112 411.8 487 46.0
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 3.5e-111 407.1 482 45.9
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 1.7e-110 404.8 462 50.2
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 5.5e-109 399.8 488 48.6
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 4.0e-107 393.7 517 45.1
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 9.5e-101 372.5 278 63.3
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 8.3e-97 359.4 631 36.6
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 6.2e-92 343.2 275 56.7
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.3e-89 335.5 286 56.6
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 9.2e-88 329.3 427 42.9
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 4.0e-83 313.9 355 52.1
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 2.6e-74 284.6 256 53.5
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 4.6e-71 273.9 314 53.5
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 9.3e-64 249.6 247 49.8
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 9.6e-61 239.6 212 62.3
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.6e-55 222.2 266 53.8
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 5.6e-53 213.8 226 57.5
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 3.2e-48 198.0 197 57.4
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.6e-47 195.7 148 74.3
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.8e-46 192.2 145 74.5
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 5.3e-27 127.5 155 49.7
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 5.3e-19 100.9 81 66.7
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 1.5e-18 99.4 251 25.5
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-16 93.2 59 71.2
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 1.7e-12 79.3 68 63.2
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 1.4e-11 76.3 65 50.8
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 3.8e-09 68.2 42 73.8
TAR629G3114 Trochodendron aralioides HOM05D004526 ORTHO05D002794 1.1e-08 66.6 49 67.3
Actinidia18119 Actinidia chinensis HOM05D000912 ORTHO05D001232 8.0e-07 60.5 87 46.0


User provided reference genes

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