Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043811.1 Olea europaea HOM05D000918 ORTHO05D043861 2.1e-28 128.3 62 100.0
SalBow7G4763 Salvia bowleyana HOM05D000918 ORTHO05D000791 1.3e-14 82.4 41 97.6
Peaxi162Scf00420g00346 Petunia axillaris HOM05D000918 ORTHO05D000791 6.6e-14 80.1 43 90.7
Ah.06g187330 Amaranthus hybridus HOM05D000918 ORTHO05D000791 1.1e-13 79.3 43 90.7
MSTRG.24068 Avicennia marina HOM05D000918 ORTHO05D000791 1.1e-13 79.3 43 90.7
Migut.K01437 Erythranthe guttata HOM05D000918 ORTHO05D000791 1.1e-13 79.3 43 90.7
SGA_v2.0_scaffold47G17552 Striga asiatica HOM05D000918 ORTHO05D000791 1.1e-13 79.3 43 90.7
MSTRG.15552 Avicennia marina HOM05D000918 ORTHO05D000791 2.5e-13 78.2 43 88.4
Oeu048587.1 Olea europaea HOM05D000918 ORTHO05D000791 2.5e-13 78.2 43 88.4
EL10Ac1g01553 Beta vulgaris HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
AUR62018096 Chenopodium quinoa HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
AUR62031998 Chenopodium quinoa HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
Ciclev10015153m.g Citrus clementina HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
Migut.H00061 Erythranthe guttata HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
Manes.15G156500 Manihot esculenta HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
Psat1g084200 Pisum sativum HOM05D000918 ORTHO05D000791 3.3e-13 77.8 43 88.4
Oeu034098.2 Olea europaea HOM05D000918 ORTHO05D000791 4.3e-13 77.4 39 97.4
QL02p072852 Quercus lobata HOM05D000918 ORTHO05D000791 4.3e-13 77.4 43 88.4
SEGI_01513 Sequoiadendron giganteum HOM05D000918 ORTHO05D000791 4.3e-13 77.4 43 86.0
Eucgr.I01691 Eucalyptus grandis HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
Gohir.A09G033500 Gossypium hirsutum HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
Gohir.D09G033700 Gossypium hirsutum HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
Gorai.006G038700 Gossypium raimondii HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
Gorai.012G089700 Gossypium raimondii HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
Lj7C605G11 Lonicera japonica HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
Manes.17G107200 Manihot esculenta HOM05D000918 ORTHO05D000791 7.3e-13 76.6 43 86.0
RcHm_v2.0_Chr2g0174311 Rosa chinensis HOM05D000918 ORTHO05D000791 7.3e-13 76.6 41 90.2
Atru.chr6.2488 Acer truncatum HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Cpa.g.sc130.39 Carica papaya HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Dinv33382 Davidia involucrata HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Duzib147G0056 Durio zibethinus HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Gohir.A07G225800 Gossypium hirsutum HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Gorai.001G268300 Gossypium raimondii HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Lj1g0003550 Lotus japonicus HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 83.7
Lj2g0001557 Lotus japonicus HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Lalb_Chr21g0317591 Lupinus albus HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Nitab4.5_0001863g0080 Nicotiana tabacum HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Potri.017G070200 Populus trichocarpa HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Sed0028078 Sechium edule HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Sc07g0004430 Simmondsia chinensis HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
SGA_v2.0_scaffold18G08238 Striga asiatica HOM05D000918 ORTHO05D000791 9.5e-13 76.3 43 86.0
Actinidia05943 Actinidia chinensis HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Actinidia36167 Actinidia chinensis HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
ATR0824G262 Amborella trichopoda HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
arahy.Tifrunner.gnm1.ann1.74FNJK Arachis hypogaea HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
arahy.Tifrunner.gnm1.ann1.XC1VLW Arachis hypogaea HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
CSS0004452 Camellia sinensis var. sinensis HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
CAN.G473.67 Capsicum annuum HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
FvH4_6g52720 Fragaria vesca HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
FAN02G2872 Fragaria x ananassa HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
FAN05G5286 Fragaria x ananassa HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
FAN09G1894 Fragaria x ananassa HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
FAN14G4228 Fragaria x ananassa HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Glyma.16G063200 Glycine max HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Glyma.19G082300 Glycine max HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Hma1.2p1_0279F.1_g112280 Hydrangea macrophylla HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
MD09G1017200 Malus domestica HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
MD17G1017900 Malus domestica HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Prupe.3G300200 Prunus persica HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
PGR142G0619 Punica granatum HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
RcHm_v2.0_Chr2g0174331 Rosa chinensis HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Hund03205 Selenicereus undatus HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Sopen02g038470 Solanum pennellii HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
PGSC0003DMG400020269 Solanum tuberosum HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
TWI56G0469 Tripterygium wilfordii HOM05D000918 ORTHO05D000791 1.2e-12 75.9 43 86.0
Aqoxy3G01437 Aquilegia oxysepala HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
arahy.Tifrunner.gnm1.ann1.R0K9MP Arachis hypogaea HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
arahy.Tifrunner.gnm1.ann1.UMN62Y Arachis hypogaea HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
HanXRQChr15g0475151 Helianthus annuus HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 83.7
Nn4g22437 Nelumbo nucifera HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
PSO782G1306 Papaver somniferum HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
Potri.001G337400 Populus trichocarpa HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
Rhsim10G0011000 Rhododendron simsii HOM05D000918 ORTHO05D000791 1.6e-12 75.5 41 87.8
THA.LOC104805343 Tarenaya hassleriana HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 86.0
TWI36G1484 Tripterygium wilfordii HOM05D000918 ORTHO05D000791 1.6e-12 75.5 43 83.7
CDE07G1416 Ceratophyllum demersum HOM05D000121 ORTHO05D000791 2.1e-12 75.1 43 86.0
Haze_14816 Corylus avellana HOM05D000918 ORTHO05D000791 2.1e-12 75.1 43 83.7
Duzib187G1278 Durio zibethinus HOM05D000918 ORTHO05D000791 2.1e-12 75.1 43 83.7
Gohir.D07G233000 Gossypium hirsutum HOM05D000918 ORTHO05D000791 2.1e-12 75.1 43 83.7
Lalb_Chr14g0363041 Lupinus albus HOM05D000918 ORTHO05D000791 2.1e-12 75.1 43 83.7
THA.LOC104825343 Tarenaya hassleriana HOM05D000918 ORTHO05D000791 2.1e-12 75.1 43 86.0
AL7G48960 Arabidopsis lyrata HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
Carub.0007s3473 Capsella rubella HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
Ca_04406_v3 Cicer arietinum L. HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
ClCG04G001430 Citrullus lanatus HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
MELO3C008985.2 Cucumis melo HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
CsaV3_4G031080 Cucumis sativus L. HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
DCAR_002962 Daucus carota HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 86.0
ECA246G1938 Erigeron canadensis HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
Gohir.D04G079700 Gossypium hirsutum HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
RhsimUnG0241400 Rhododendron simsii HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
SalBow1G0357 Salvia bowleyana HOM05D000918 ORTHO05D000791 2.8e-12 74.7 48 79.2
SalBow1G2763 Salvia bowleyana HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
unitig_744.g24366 Utricularia gibba HOM05D000918 ORTHO05D000791 2.8e-12 74.7 43 83.7
Aa31LG2G5330 Aethionema arabicum HOM05D000918 ORTHO05D000791 3.6e-12 74.3 43 83.7
Cc07_g00420 Coffea canephora HOM05D000918 ORTHO05D000791 3.6e-12 74.3 43 83.7
Dinv25692 Davidia involucrata HOM05D000918 ORTHO05D000791 3.6e-12 74.3 43 83.7
MBI06_g43790_MAGBIO Magnolia biondii HOM05D000918 ORTHO05D000791 3.6e-12 74.3 43 83.7
THA.LOC104823966 Tarenaya hassleriana HOM05D000918 ORTHO05D000791 3.6e-12 74.3 43 83.7
TPR.G29002 Trifolium pratense HOM05D000918 ORTHO05D000791 3.6e-12 74.3 43 83.7
BcaB04g19434 Brassica carinata HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
Carub.0005s0557 Capsella rubella HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
CARHR213760 Cardamine hirsuta HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
CiPaw.04G033200 Carya illinoinensis HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
Thhalv10004014m.g Eutrema salsugineum HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
Sabra16G0218200 Salix brachista HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
SHI03868 Sapria himalayana HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
Sp2g16460 Schrenkiella parvula HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
TAR371G0525 Trochodendron aralioides HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
VMungo1383G3437 Vigna mungo HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
GSVIVG01001847001 Vitis vinifera HOM05D000918 ORTHO05D000791 4.7e-12 73.9 43 83.7
AT5G40760 Arabidopsis thaliana HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 81.4
BcaB02g07928 Brassica carinata HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
BcaC08g44486 Brassica carinata HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
A07p20520 Brassica napus HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
C06p19370 Brassica napus HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
BolC6t37132H Brassica oleracea HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
BraA07t29743Z Brassica rapa HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
Ca_03853_v3 Cicer arietinum L. HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 81.4
Thhalv10027727m.g Eutrema salsugineum HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
Medtr7g037440 Medicago truncatula HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 81.4
Phvul.008G148700 Phaseolus vulgaris HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 81.4
Sp7g01140 Schrenkiella parvula HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 83.7
TAR629G2794 Trochodendron aralioides HOM05D000918 ORTHO05D000791 6.2e-12 73.6 43 81.4
Aa31LG9G890 Aethionema arabicum HOM05D000918 ORTHO05D000791 8.1e-12 73.2 43 83.7
SMO141G0107 Selaginella moellendorffii HOM05D000918 ORTHO05D000791 8.1e-12 73.2 43 83.7
CSS0004231 Camellia sinensis var. sinensis HOM05D000918 ORTHO05D000791 1.1e-11 72.8 43 81.4
CSS0050169 Camellia sinensis var. sinensis HOM05D000918 ORTHO05D000791 1.1e-11 72.8 43 81.4
Cfa007276 Carpinus fangiana HOM05D000918 ORTHO05D000791 1.1e-11 72.8 43 81.4
HanXRQChr17g0549541 Helianthus annuus HOM05D000918 ORTHO05D000791 1.1e-11 72.8 43 81.4
Lsat_1_v5_gn_0_47540 Lactuca sativa HOM05D000918 ORTHO05D000791 1.1e-11 72.8 43 83.7
Nn3g16564 Nelumbo nucifera HOM05D000918 ORTHO05D000791 1.1e-11 72.8 43 83.7
HPP92_024691 Vanilla planifolia HOM05D000918 ORTHO05D000791 1.1e-11 72.8 39 89.7
CDE02G0462 Ceratophyllum demersum HOM05D000918 ORTHO05D000791 1.8e-11 72.0 43 83.7
HanXRQChr15g0487071 Helianthus annuus HOM05D000918 ORTHO05D000791 1.8e-11 72.0 43 79.1
Psat3g169360 Pisum sativum HOM05D000918 ORTHO05D000791 1.8e-11 72.0 43 79.1
TPR.G9068 Trifolium pratense HOM05D000918 ORTHO05D000791 1.8e-11 72.0 43 79.1
vmacro05925 Vaccinium macrocarpon HOM05D000918 ORTHO05D000791 1.8e-11 72.0 43 81.4
Lalb_Chr02g0157911 Lupinus albus HOM05D000918 ORTHO05D000791 2.3e-11 71.6 43 81.4
Medtr6g022860 Medicago truncatula HOM05D000918 ORTHO05D000791 2.3e-11 71.6 43 81.4
Thecc.04G027700 Theobroma cacao HOM05D000918 ORTHO05D000791 2.3e-11 71.6 43 81.4
AL5G16530 Arabidopsis lyrata HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
AT3G27300 Arabidopsis thaliana HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BcaC04g23907 Brassica carinata HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BcaC06g31005 Brassica carinata HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BcaC06g33834 Brassica carinata HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
A06p41310 Brassica napus HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
A09p03360 Brassica napus HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
C07p36350 Brassica napus HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
C09p03570 Brassica napus HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BolC7t44151H Brassica oleracea HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BolC9t53278H Brassica oleracea HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BraA06t27056Z Brassica rapa HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
BraA09t35974Z Brassica rapa HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
CARHR148580 Cardamine hirsuta HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 81.4
Phvul.004G057000 Phaseolus vulgaris HOM05D000918 ORTHO05D000791 3.1e-11 71.2 43 79.1
MBI11_g31857_MAGBIO Magnolia biondii HOM05D000918 ORTHO05D000791 4.0e-11 70.9 40 85.0
DCAR_015077 Daucus carota HOM05D000918 ORTHO05D000791 5.2e-11 70.5 43 79.1
Sed0022509 Sechium edule HOM05D000918 ORTHO05D000791 5.2e-11 70.5 39 87.2
DCAR_003679 Daucus carota HOM05D000918 ORTHO05D000791 6.8e-11 70.1 43 79.1
PSO017G5502 Papaver somniferum HOM05D000918 ORTHO05D000791 6.8e-11 70.1 43 79.1
PSO478G4371 Papaver somniferum HOM05D000918 ORTHO05D000791 6.8e-11 70.1 43 79.1
CiPaw.03G050600 Carya illinoinensis HOM05D000918 ORTHO05D000791 8.9e-11 69.7 42 81.0
VMungo0464G0270 Vigna mungo HOM05D000918 ORTHO05D000791 8.9e-11 69.7 43 76.7
ECA232G2223 Erigeron canadensis HOM05D000918 ORTHO05D000791 1.2e-10 69.3 43 79.1
Glyma.19G077300 Glycine max HOM05D000918 ORTHO05D000791 1.2e-10 69.3 43 76.7
CANSAT64G2427 Cannabis sativa HOM05D000918 ORTHO05D000791 1.5e-10 68.9 43 79.1
CDE09G1386 Ceratophyllum demersum HOM05D000918 ORTHO05D043861 2.0e-10 68.6 42 81.0
Zm00001eb246350 Zea mays HOM05D000918 ORTHO05D000791 2.6e-10 68.2 43 76.7
Os04g0485300 Oryza sativa ssp. japonica HOM05D000918 ORTHO05D000791 3.4e-10 67.8 43 76.7
PSO782G4700 Papaver somniferum HOM05D000918 ORTHO05D000791 3.4e-10 67.8 43 76.7
Zm00001eb079220 Zea mays HOM05D000918 ORTHO05D000791 3.4e-10 67.8 43 76.7
Pp3c20_10460 Physcomitrium patens HOM05D000918 ORTHO05D000791 4.4e-10 67.4 43 72.1
CBR_g18744 Chara braunii HOM05D000918 ORTHO05D000791 5.8e-10 67.0 40 80.0
Pp3c24_8780 Physcomitrium patens HOM05D000918 ORTHO05D000791 5.8e-10 67.0 43 72.1
Os02g0600400 Oryza sativa ssp. japonica HOM05D000918 ORTHO05D000791 7.5e-10 66.6 43 76.7
Pp3c23_16910 Physcomitrium patens HOM05D000918 ORTHO05D000791 7.5e-10 66.6 43 69.8
Mapoly0009s0122 Marchantia polymorpha HOM05D000918 ORTHO05D000791 9.8e-10 66.2 43 69.8
DCAR_011291 Daucus carota HOM05D000918 ORTHO05D000791 1.3e-09 65.9 43 72.1
AagrBONN_evm.TU.Sc2ySwM_344.5494 Anthoceros agrestis HOM05D000918 ORTHO05D000791 4.9e-09 63.9 42 69.0
Cre17.g725550 Chlamydomonas reinhardtii HOM05D000918 ORTHO05D000791 1.9e-08 62.0 38 76.3
Gohir.A05G341600 Gossypium hirsutum HOM05D000918 ORTHO05D000791 1.9e-08 62.0 39 74.4
MCO11G724 Micromonas commoda HOM05D000918 ORTHO05D000791 1.6e-07 58.9 42 64.3
Haze_27428 Corylus avellana HOM05D000918 ORTHO05D000791 3.0e-06 54.7 42 52.4


User provided reference genes

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