Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043682.1 Olea europaea HOM05D000200 ORTHO05D010867 3.3e-124 448.4 225 100.0
Oeu030054.1 Olea europaea HOM05D000200 ORTHO05D010867 5.4e-98 361.3 202 91.1
Oeu014706.3 Olea europaea HOM05D000200 ORTHO05D010867 1.1e-79 300.4 222 70.3
MSTRG.15932 Avicennia marina HOM05D000200 ORTHO05D010867 5.0e-27 125.6 216 41.2
Dinv39816 Davidia involucrata HOM05D000200 ORTHO05D010867 3.8e-19 99.4 222 34.2
Ciclev10007271m.g Citrus clementina HOM05D000200 ORTHO05D001546 4.2e-18 95.9 217 32.7
Dinv40497 Davidia involucrata HOM05D000200 ORTHO05D010867 7.2e-18 95.1 223 32.7
TAR624G0601 Trochodendron aralioides HOM05D000200 ORTHO05D001546 4.7e-17 92.4 233 31.8
TAR626G1962 Trochodendron aralioides HOM05D000200 ORTHO05D001546 6.1e-17 92.0 220 34.1
Cpa.g.sc80.116 Carica papaya HOM05D000200 ORTHO05D001546 8.8e-16 88.2 216 31.5
Eucgr.F03356 Eucalyptus grandis HOM05D000200 ORTHO05D001546 1.1e-15 87.8 217 30.9
Nitab4.5_0003574g0120 Nicotiana tabacum HOM05D000200 ORTHO05D010867 1.1e-15 87.8 213 33.3
COL.COLO4_09481 Corchorus olitorius HOM05D000200 ORTHO05D001546 2.6e-15 86.7 207 29.5
Dinv08342 Davidia involucrata HOM05D000200 ORTHO05D001546 4.4e-15 85.9 239 30.1
vmacro09561 Vaccinium macrocarpon HOM05D000200 ORTHO05D001546 7.4e-15 85.1 206 29.6
Atru.chr2.2907 Acer truncatum HOM05D000200 ORTHO05D001546 1.3e-14 84.3 234 30.3
Aqoxy4G01409 Aquilegia oxysepala HOM05D000200 ORTHO05D001546 1.7e-14 84.0 223 28.7
AL8G29610 Arabidopsis lyrata HOM05D000200 ORTHO05D001546 2.8e-14 83.2 232 31.9
CSS0009429 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D010867 3.7e-14 82.8 218 33.5
AUR62029311 Chenopodium quinoa HOM05D000200 ORTHO05D001546 3.7e-14 82.8 231 30.7
BcaB05g22124 Brassica carinata HOM05D000200 ORTHO05D001546 4.8e-14 82.4 242 28.5
A02p10430 Brassica napus HOM05D000200 ORTHO05D001546 4.8e-14 82.4 237 30.8
Potri.011G126800 Populus trichocarpa HOM05D000200 ORTHO05D001546 4.8e-14 82.4 232 29.3
CARHR267570 Cardamine hirsuta HOM05D000200 ORTHO05D001546 8.2e-14 81.6 240 31.2
AUR62015599 Chenopodium quinoa HOM05D000200 ORTHO05D001546 8.2e-14 81.6 231 30.3
Actinidia35280 Actinidia chinensis HOM05D000200 ORTHO05D001546 1.1e-13 81.3 219 27.9
AT5G54280 Arabidopsis thaliana HOM05D000200 ORTHO05D001546 1.1e-13 81.3 232 31.5
Cc05_g12710 Coffea canephora HOM05D000200 ORTHO05D001546 1.1e-13 81.3 207 32.4
Hma1.2p1_0144F.1_g064700 Hydrangea macrophylla HOM05D000200 ORTHO05D010867 1.1e-13 81.3 217 31.3
Hma1.2p1_1241F.1_g269825 Hydrangea macrophylla HOM05D000200 ORTHO05D010867 1.1e-13 81.3 217 31.3
MBI02_g05992_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D001546 1.1e-13 81.3 232 28.0
Sp6g16320 Schrenkiella parvula HOM05D000200 ORTHO05D001546 1.4e-13 80.9 232 31.0
EL10Ac4g08056 Beta vulgaris HOM05D000200 ORTHO05D001546 1.8e-13 80.5 218 29.4
BcaC04g20354 Brassica carinata HOM05D000200 ORTHO05D001546 1.8e-13 80.5 232 31.5
C09p44590 Brassica napus HOM05D000200 ORTHO05D001546 1.8e-13 80.5 232 31.5
BolC9t57332H Brassica oleracea HOM05D000200 ORTHO05D001546 1.8e-13 80.5 232 31.5
CAN.G1181.30 Capsicum annuum HOM05D000200 ORTHO05D010867 1.8e-13 80.5 215 32.6
Gohir.D05G361800 Gossypium hirsutum HOM05D000200 ORTHO05D001546 1.8e-13 80.5 231 26.8
Gorai.009G430900 Gossypium raimondii HOM05D000200 ORTHO05D001546 1.8e-13 80.5 231 26.8
ATR0693G008 Amborella trichopoda HOM05D000200 ORTHO05D001546 2.4e-13 80.1 225 28.9
CANSAT11G1345 Cannabis sativa HOM05D000200 ORTHO05D001546 2.4e-13 80.1 211 28.0
BcaB08g35786 Brassica carinata HOM05D000200 ORTHO05D001546 3.1e-13 79.7 245 30.6
C02p17190 Brassica napus HOM05D000200 ORTHO05D001546 3.1e-13 79.7 236 29.7
BolC2t07820H Brassica oleracea HOM05D000200 ORTHO05D001546 3.1e-13 79.7 227 30.4
Carub.0008s1463 Capsella rubella HOM05D000200 ORTHO05D001546 3.1e-13 79.7 232 30.6
Thhalv10012475m.g Eutrema salsugineum HOM05D000200 ORTHO05D001546 3.1e-13 79.7 232 31.5
MD11G1237000 Malus domestica HOM05D000200 ORTHO05D001546 3.1e-13 79.7 211 27.5
Manes.03G116600 Manihot esculenta HOM05D000200 ORTHO05D001546 3.1e-13 79.7 239 28.0
Manes.15G083100 Manihot esculenta HOM05D000200 ORTHO05D001546 3.1e-13 79.7 227 28.2
Thecc.07G071000 Theobroma cacao HOM05D000200 ORTHO05D001546 3.1e-13 79.7 214 28.0
Nitab4.5_0000190g0160 Nicotiana tabacum HOM05D000200 ORTHO05D010867 4.1e-13 79.3 213 31.9
PGSC0003DMG400022412 Solanum tuberosum HOM05D000200 ORTHO05D010867 4.1e-13 79.3 212 33.5
Gohir.A04G026200 Gossypium hirsutum HOM05D000200 ORTHO05D001546 5.3e-13 79.0 208 27.9
QL08p017742 Quercus lobata HOM05D000200 ORTHO05D001546 7.0e-13 78.6 238 29.4
BcaC03g14343 Brassica carinata HOM05D000200 ORTHO05D001546 9.1e-13 78.2 236 29.7
Sabra16G0268400 Salix brachista HOM05D000200 ORTHO05D001546 9.1e-13 78.2 228 29.4
PGR031G1990 Punica granatum HOM05D000200 ORTHO05D001546 1.2e-12 77.8 242 29.8
Ah.04g165400 Amaranthus hybridus HOM05D000200 ORTHO05D001546 1.6e-12 77.4 217 28.1
Potri.001G407000 Populus trichocarpa HOM05D000200 ORTHO05D001546 2.0e-12 77.0 233 28.3
Sabra16G0270700 Salix brachista HOM05D000200 ORTHO05D001546 2.0e-12 77.0 222 28.4
Gohir.A04G025900 Gossypium hirsutum HOM05D000200 ORTHO05D001546 2.6e-12 76.6 208 27.4
Os07g0562800 Oryza sativa ssp. japonica HOM05D000200 ORTHO05D001546 2.6e-12 76.6 215 28.8
Sed0008404 Sechium edule HOM05D000200 ORTHO05D001546 2.6e-12 76.6 215 29.8
Solyc02g079070.4 Solanum lycopersicum HOM05D000200 ORTHO05D010867 2.6e-12 76.6 213 32.4
A10p11570 Brassica napus HOM05D000200 ORTHO05D001546 3.5e-12 76.3 232 31.5
BraA10t43252Z Brassica rapa HOM05D000200 ORTHO05D001546 3.5e-12 76.3 232 31.5
Sopen02g023880 Solanum pennellii HOM05D000200 ORTHO05D010867 3.5e-12 76.3 211 32.2
Nn1g06752 Nelumbo nucifera HOM05D000200 ORTHO05D001546 4.5e-12 75.9 232 27.6
Aa31LG3G10240 Aethionema arabicum HOM05D000200 ORTHO05D001546 7.7e-12 75.1 225 29.3
MD03G1219000 Malus domestica HOM05D000200 ORTHO05D001546 7.7e-12 75.1 216 27.8
Hund23378 Selenicereus undatus HOM05D000200 ORTHO05D010867 7.7e-12 75.1 228 30.3
Haze_09530 Corylus avellana HOM05D000200 ORTHO05D001546 1.0e-11 74.7 238 29.4
SalBow8G1731 Salvia bowleyana HOM05D000200 ORTHO05D010867 1.0e-11 74.7 219 31.5
Cc02_g12470 Coffea canephora HOM05D000200 ORTHO05D010867 1.3e-11 74.3 219 31.1
RhsimUnG0258700 Rhododendron simsii HOM05D000200 ORTHO05D001546 2.2e-11 73.6 206 27.2
TWI38G1989 Tripterygium wilfordii HOM05D000200 ORTHO05D001546 2.2e-11 73.6 232 30.2
CiPaw.11G176700 Carya illinoinensis HOM05D000200 ORTHO05D001546 2.9e-11 73.2 218 28.4
SGA_v2.0_scaffold7G03953 Striga asiatica HOM05D000200 ORTHO05D010867 2.9e-11 73.2 222 29.7
CiPaw.12G122800 Carya illinoinensis HOM05D000200 ORTHO05D001546 3.8e-11 72.8 213 29.6
Prupe.4G190400 Prunus persica HOM05D000200 ORTHO05D001546 3.8e-11 72.8 214 27.6
GSVIVG01014437001 Vitis vinifera HOM05D000200 ORTHO05D001546 3.8e-11 72.8 210 31.0
RcHm_v2.0_Chr5g0036041 Rosa chinensis HOM05D000200 ORTHO05D001546 1.1e-10 71.2 219 27.4
FAN21G0598 Fragaria x ananassa HOM05D000200 ORTHO05D001546 1.5e-10 70.9 212 26.4
TWI39G0397 Tripterygium wilfordii HOM05D000200 ORTHO05D001546 1.5e-10 70.9 237 26.6
Oeu019364.1 Olea europaea HOM05D000200 ORTHO05D001546 1.9e-10 70.5 218 28.0
Rhsim13G0173500 Rhododendron simsii HOM05D000200 ORTHO05D010867 1.9e-10 70.5 220 28.2
Nn1g03913 Nelumbo nucifera HOM05D000200 ORTHO05D001546 2.5e-10 70.1 235 27.2
SEGI_21112 Sequoiadendron giganteum HOM05D000200 ORTHO05D010867 2.5e-10 70.1 235 26.4
Lj1C853T9 Lonicera japonica HOM05D000200 ORTHO05D010867 3.2e-10 69.7 222 28.4
Peaxi162Scf00588g01111 Petunia axillaris HOM05D000200 ORTHO05D010867 3.2e-10 69.7 195 30.3
ClCG11G018470 Citrullus lanatus HOM05D000200 ORTHO05D001546 7.2e-10 68.6 224 29.5
HPP92_012355 Vanilla planifolia HOM05D000200 ORTHO05D001546 7.2e-10 68.6 220 25.9
CSS0049999 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D001546 9.4e-10 68.2 210 26.7
Gorai.002G076300 Gossypium raimondii HOM05D000200 ORTHO05D001546 9.4e-10 68.2 210 27.1
Nitab4.5_0000207g0290 Nicotiana tabacum HOM05D000200 ORTHO05D001546 2.1e-09 67.0 214 27.1
Hund02188 Selenicereus undatus HOM05D000200 ORTHO05D001546 2.7e-09 66.6 225 26.7
Zm00001eb324250 Zea mays HOM05D000200 ORTHO05D001546 2.7e-09 66.6 220 28.6
FAN11G2529 Fragaria x ananassa HOM05D000200 ORTHO05D001546 3.6e-09 66.2 221 26.2
Mapoly0024s0124 Marchantia polymorpha HOM05D000200 ORTHO05D001546 3.6e-09 66.2 254 28.0
FvH4_3g21010 Fragaria vesca HOM05D000200 ORTHO05D001546 4.7e-09 65.9 221 26.2
MELO3C018189.2 Cucumis melo HOM05D000200 ORTHO05D001546 6.1e-09 65.5 222 29.3
CsaV3_3G044360 Cucumis sativus L. HOM05D000200 ORTHO05D001546 6.1e-09 65.5 214 27.1
FAN16G0033 Fragaria x ananassa HOM05D000200 ORTHO05D001546 6.1e-09 65.5 221 26.7
Nitab4.5_0001320g0070 Nicotiana tabacum HOM05D000200 ORTHO05D001546 6.1e-09 65.5 214 26.6
Lalb_Chr25g0286761 Lupinus albus HOM05D000200 ORTHO05D001546 8.0e-09 65.1 222 26.6
Peaxi162Scf00181g00068 Petunia axillaris HOM05D000200 ORTHO05D001546 8.0e-09 65.1 231 26.0
THA.LOC104811845 Tarenaya hassleriana HOM05D000200 ORTHO05D001546 1.4e-08 64.3 222 28.8
Gohir.A01G068800 Gossypium hirsutum HOM05D000200 ORTHO05D001546 1.8e-08 63.9 240 27.1
THA.LOC104801596 Tarenaya hassleriana HOM05D000200 ORTHO05D001546 1.8e-08 63.9 222 27.0
DCAR_022488 Daucus carota HOM05D000200 ORTHO05D010867 2.3e-08 63.5 206 25.7
Duzib213G0644 Durio zibethinus HOM05D000200 ORTHO05D001546 2.3e-08 63.5 231 24.7
Gohir.D01G056200 Gossypium hirsutum HOM05D000200 ORTHO05D001546 2.3e-08 63.5 210 26.2
Lj3g0021160 Lotus japonicus HOM05D000200 ORTHO05D001546 2.3e-08 63.5 228 28.1
Actinidia18743 Actinidia chinensis HOM05D000200 ORTHO05D001546 3.0e-08 63.2 84 33.3
TWI53G0999 Tripterygium wilfordii HOM05D000200 ORTHO05D001546 3.0e-08 63.2 227 28.2
FAN25G0486 Fragaria x ananassa HOM05D000200 ORTHO05D001546 4.0e-08 62.8 204 27.0
SMO139G0074 Selaginella moellendorffii HOM05D000200 ORTHO05D001546 5.2e-08 62.4 225 28.4
Actinidia01936 Actinidia chinensis HOM05D000200 ORTHO05D010867 6.7e-08 62.0 222 28.8
Pp3c19_9660 Physcomitrium patens HOM05D000200 ORTHO05D001546 6.7e-08 62.0 245 24.1
Sed0010032 Sechium edule HOM05D000200 ORTHO05D001546 6.7e-08 62.0 230 27.0
DCAR_009986 Daucus carota HOM05D000200 ORTHO05D001546 8.8e-08 61.6 226 27.9
Duzib170G0125 Durio zibethinus HOM05D000200 ORTHO05D001546 8.8e-08 61.6 236 24.2
Lj9C630G5 Lonicera japonica HOM05D000200 ORTHO05D010867 8.8e-08 61.6 216 23.6
THA.LOC104799906 Tarenaya hassleriana HOM05D000200 ORTHO05D001546 1.1e-07 61.2 239 26.4
HPP92_016556 Vanilla planifolia HOM05D000200 ORTHO05D001546 1.1e-07 61.2 243 26.7
Ca_23011_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 1.5e-07 60.8 229 25.8
Migut.M01858 Erythranthe guttata HOM05D000200 ORTHO05D001546 1.5e-07 60.8 225 26.2
Glyma.13G281900 Glycine max HOM05D000200 ORTHO05D001546 1.5e-07 60.8 218 26.6
Dinv22364 Davidia involucrata HOM05D000200 ORTHO05D001546 2.0e-07 60.5 219 27.4
HanXRQChr12g0366221 Helianthus annuus HOM05D000200 ORTHO05D001546 2.0e-07 60.5 232 29.3
Ca_01802_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 2.6e-07 60.1 226 25.2
Ca_30471_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 2.6e-07 60.1 226 25.2
Solyc10g006820.4 Solanum lycopersicum HOM05D000200 ORTHO05D001546 2.6e-07 60.1 237 25.3
CSS0024601 Camellia sinensis var. sinensis HOM05D000200 ORTHO05D001546 3.3e-07 59.7 225 27.6
DCAR_029661 Daucus carota HOM05D000200 ORTHO05D010867 3.3e-07 59.7 214 24.3
Medtr2g081070 Medicago truncatula HOM05D000200 ORTHO05D001546 3.3e-07 59.7 219 26.9
Sopen10g002740 Solanum pennellii HOM05D000200 ORTHO05D001546 3.3e-07 59.7 216 25.5
PSO832G1519 Papaver somniferum HOM05D000200 ORTHO05D001546 4.4e-07 59.3 205 30.2
AL1G58000 Arabidopsis lyrata HOM05D000200 ORTHO05D001546 5.7e-07 58.9 235 26.4
TPR.G32864 Trifolium pratense HOM05D000200 ORTHO05D001546 5.7e-07 58.9 235 27.7
Zm00001eb106890 Zea mays HOM05D000200 ORTHO05D001546 5.7e-07 58.9 222 26.6
CAN.G1110.43 Capsicum annuum HOM05D000200 ORTHO05D001546 7.5e-07 58.5 215 25.1
CDE05G1985 Ceratophyllum demersum HOM05D000200 ORTHO05D130016 7.5e-07 58.5 219 27.4
Thhalv10011193m.g Eutrema salsugineum HOM05D000200 ORTHO05D001546 7.5e-07 58.5 234 25.6
Sopen07g031770 Solanum pennellii HOM05D000200 ORTHO05D001546 7.5e-07 58.5 215 24.7
AT1G50360 Arabidopsis thaliana HOM05D000200 ORTHO05D001546 9.7e-07 58.2 235 26.0
SEGI_04371 Sequoiadendron giganteum HOM05D000200 ORTHO05D001546 9.7e-07 58.2 235 26.0
Glyma.12G147000 Glycine max HOM05D000200 ORTHO05D001546 1.7e-06 57.4 222 27.0
unitig_22.g6355 Utricularia gibba HOM05D000200 ORTHO05D001546 1.7e-06 57.4 218 27.1
AagrBONN_evm.TU.Sc2ySwM_228.1656 Anthoceros agrestis HOM05D000200 ORTHO05D001546 2.2e-06 57.0 259 23.9
Solyc07g063590.4 Solanum lycopersicum HOM05D000200 ORTHO05D001546 2.2e-06 57.0 215 24.7
arahy.Tifrunner.gnm1.ann1.FHLQ2C Arachis hypogaea HOM05D000200 ORTHO05D001546 2.8e-06 56.6 216 27.8
PSO210G1635 Papaver somniferum HOM05D000200 ORTHO05D001546 2.8e-06 56.6 205 29.8
Carub.0001s3944 Capsella rubella HOM05D000200 ORTHO05D001546 3.7e-06 56.2 235 25.1
Lalb_Chr19g0134501 Lupinus albus HOM05D000200 ORTHO05D001546 3.7e-06 56.2 237 26.2
Pp3c18_1430 Physcomitrium patens HOM05D000200 ORTHO05D001546 3.7e-06 56.2 237 24.9
Sp1g37190 Schrenkiella parvula HOM05D000200 ORTHO05D001546 3.7e-06 56.2 234 26.1
SGA_v2.0_scaffold77G25192 Striga asiatica HOM05D000200 ORTHO05D001546 3.7e-06 56.2 212 28.3
arahy.Tifrunner.gnm1.ann1.9FY18V Arachis hypogaea HOM05D000200 ORTHO05D001546 4.8e-06 55.8 224 26.8
Phvul.005G085900 Phaseolus vulgaris HOM05D000200 ORTHO05D001546 4.8e-06 55.8 220 27.3
Lj3g0008611 Lotus japonicus HOM05D000200 ORTHO05D001546 6.3e-06 55.5 220 24.5
PGSC0003DMG400019284 Solanum tuberosum HOM05D000200 ORTHO05D001546 6.3e-06 55.5 218 25.2
A05p20250 Brassica napus HOM05D000200 ORTHO05D001546 8.2e-06 55.1 218 25.2
C05p33980 Brassica napus HOM05D000200 ORTHO05D001546 8.2e-06 55.1 224 25.9
BolC5t32133H Brassica oleracea HOM05D000200 ORTHO05D001546 8.2e-06 55.1 224 25.9
BraA05t20935Z Brassica rapa HOM05D000200 ORTHO05D001546 8.2e-06 55.1 218 25.2
Gohir.D13G148200 Gossypium hirsutum HOM05D000200 ORTHO05D001546 8.2e-06 55.1 84 38.1
Pp3c15_13490 Physcomitrium patens HOM05D000200 ORTHO05D001546 8.2e-06 55.1 252 25.4
Sp7g25300 Schrenkiella parvula HOM05D000200 ORTHO05D001546 8.2e-06 55.1 228 25.9


User provided reference genes

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