Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 0.0e+00 1236.5 671 100.0
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 2.7e-206 722.6 674 62.5
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.8e-202 709.9 674 61.0
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 5.0e-200 701.8 673 60.0
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 5.0e-200 701.8 675 61.3
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.1e-199 700.7 674 60.1
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 8.0e-198 694.5 678 61.4
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 1.0e-197 694.1 674 61.1
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 4.0e-197 692.2 678 60.6
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 6.8e-197 691.4 700 58.4
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 2.6e-196 689.5 674 59.5
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 9.8e-196 687.6 674 60.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.3e-195 687.2 674 58.9
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 6.3e-195 684.9 674 59.6
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 8.3e-195 684.5 674 60.2
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 1.8e-194 683.3 675 59.6
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 3.1e-194 682.6 675 59.7
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 7.0e-194 681.4 674 59.2
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 2.9e-192 676.0 668 59.6
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 5.0e-192 675.2 674 59.5
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 8.6e-192 674.5 668 59.0
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.0e-189 667.5 674 58.3
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 3.0e-189 666.0 674 57.7
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 4.4e-188 662.1 673 57.2
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 7.0e-186 654.8 674 57.0
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 7.0e-186 654.8 674 58.5
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 2.7e-185 652.9 674 56.7
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 3.5e-185 652.5 655 59.8
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 6.6e-184 648.3 676 57.8
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 6.6e-184 648.3 673 57.7
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.9e-183 646.7 673 56.3
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 1.9e-183 646.7 763 52.8
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 2.5e-183 646.4 673 56.9
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.6e-182 642.5 672 56.1
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 4.7e-182 642.1 674 56.4
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 2.6e-180 636.3 673 56.2
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 3.4e-180 636.0 670 56.3
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 5.8e-180 635.2 671 55.6
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 5.4e-178 628.6 674 56.5
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 7.0e-178 628.2 673 56.2
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 4.6e-177 625.5 644 56.7
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 1.3e-176 624.0 672 56.2
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 5.0e-176 622.1 663 55.5
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 1.9e-175 620.2 674 56.5
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 5.6e-175 618.6 671 55.1
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.8e-173 613.6 674 54.3
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 6.8e-173 611.7 673 54.2
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 2.0e-172 610.1 672 53.1
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 2.2e-171 606.7 674 53.9
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 4.9e-171 605.5 670 55.1
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 6.4e-171 605.1 674 53.3
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 8.3e-171 604.7 670 53.9
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 2.4e-170 603.2 674 54.0
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.6e-169 600.5 672 53.0
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.6e-169 600.5 670 53.6
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 2.1e-169 600.1 672 52.8
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 6.0e-169 598.6 671 52.5
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 6.0e-169 598.6 674 53.7
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 2.3e-168 596.7 672 52.8
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 8.6e-168 594.7 671 53.8
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 2.5e-167 593.2 672 52.1
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 3.3e-167 592.8 671 54.4
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 5.6e-167 592.0 676 54.4
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 9.5e-167 591.3 672 53.3
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 8.1e-166 588.2 672 52.1
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.8e-165 587.0 676 52.8
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 4.0e-165 585.9 672 51.8
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 4.4e-164 582.4 678 54.3
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 3.2e-162 576.2 640 54.7
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 2.7e-161 573.2 672 53.1
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 2.7e-161 573.2 672 53.1
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 2.7e-161 573.2 672 53.1
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 4.6e-161 572.4 674 51.6
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.3e-155 554.3 643 54.0
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.4e-154 550.8 674 50.9
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 6.0e-153 545.4 673 51.7
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 7.8e-153 545.0 548 57.8
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.3e-152 543.5 745 48.1
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 1.6e-150 537.3 671 50.5
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.6e-150 537.3 612 53.8
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 2.1e-150 537.0 644 52.8
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.8e-150 536.6 674 50.6
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 7.6e-148 528.5 645 49.6
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.1e-143 514.6 673 49.6
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 6.9e-141 505.4 709 47.5
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 1.9e-138 497.3 682 45.3
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 3.5e-137 493.0 646 48.1
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.3e-136 491.1 676 45.4
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.8e-136 490.7 674 47.8
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.6e-134 484.2 672 45.4
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 4.9e-131 472.6 343 77.6
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.9e-127 460.7 424 62.5
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.3e-123 448.0 420 60.7
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 2.2e-118 430.6 475 54.9
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 2.2e-115 420.6 675 43.4
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 2.8e-110 403.7 362 62.2
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 3.1e-109 400.2 316 73.4
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.7e-91 341.3 406 51.7
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 3.7e-86 323.6 469 47.3
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 5.9e-76 289.7 313 55.6
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.2e-73 282.0 470 43.6
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 5.7e-71 273.1 318 54.1
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 2.0e-60 238.0 694 30.0
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 1.7e-54 218.4 262 51.5
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.7e-51 208.4 669 27.2
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 3.9e-51 207.2 603 30.8
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 5.1e-51 206.8 414 38.9
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 6.6e-51 206.5 399 40.1
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 8.1e-49 199.5 658 27.2
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 4.6e-44 183.7 702 27.9
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 2.1e-41 174.9 320 39.7
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 9.9e-31 139.4 136 58.1
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 6.2e-25 120.2 84 69.0
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 1.4e-24 119.0 548 24.3
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 2.1e-20 105.1 257 33.1
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 7.4e-18 96.7 118 50.0
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-17 95.9 194 36.1
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.8e-16 92.0 134 39.6
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 9.0e-16 89.7 135 39.3
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.8e-15 87.0 54 87.0
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.9e-13 82.0 112 48.2
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.1e-12 78.6 67 62.7
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 3.5e-12 77.8 118 36.4
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 3.3e-10 71.2 62 58.1
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 8.2e-09 66.6 94 42.6
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 6.9e-08 63.5 104 37.5
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 2.6e-07 61.6 41 78.0
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.8e-06 57.8 99 34.3


User provided reference genes

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