Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 4.7e-196 687.6 322 100.0
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 1.6e-172 609.4 321 86.0
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 1.1e-168 596.7 314 86.0
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 7.1e-168 594.0 322 83.5
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 2.3e-166 589.0 320 84.1
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 2.1e-164 582.4 311 84.9
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 1.2e-162 576.6 320 81.2
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 5.8e-162 574.3 322 81.1
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 1.3e-161 573.2 322 81.4
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 4.9e-161 571.2 314 82.5
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 1.6e-159 566.2 319 79.9
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 2.1e-159 565.8 321 80.4
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 2.1e-159 565.8 319 82.4
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 2.1e-159 565.8 319 82.4
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 3.5e-159 565.1 308 82.8
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 1.3e-158 563.1 322 81.4
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 1.5e-157 559.7 322 79.8
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 1.9e-157 559.3 318 80.5
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 2.5e-157 558.9 313 80.8
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 6.2e-156 554.3 322 78.3
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 6.2e-156 554.3 321 78.5
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 8.1e-156 553.9 313 79.9
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.1e-155 553.5 318 79.6
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 2.4e-155 552.4 313 80.5
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 4.0e-155 551.6 320 78.4
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 6.8e-155 550.8 322 78.6
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 6.8e-155 550.8 318 79.2
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 8.9e-155 550.4 322 78.0
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 2.0e-154 549.3 322 79.5
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 2.0e-154 549.3 311 79.4
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 2.0e-154 549.3 313 80.2
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 5.8e-154 547.7 314 80.9
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 7.6e-154 547.4 313 78.3
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 9.9e-154 547.0 320 76.9
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 2.2e-153 545.8 313 79.6
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 2.9e-153 545.4 313 78.6
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 4.9e-153 544.7 316 79.7
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 6.4e-153 544.3 322 76.1
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 8.4e-153 543.9 315 78.7
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 8.4e-153 543.9 313 78.0
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.4e-152 543.1 322 75.8
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 1.9e-152 542.7 322 76.1
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 2.4e-152 542.3 314 78.0
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 4.2e-152 541.6 322 76.1
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 4.2e-152 541.6 322 76.1
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 7.1e-152 540.8 310 78.1
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 9.3e-152 540.4 310 77.1
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 1.2e-151 540.0 322 77.0
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 2.1e-151 539.3 313 77.3
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 2.7e-151 538.9 313 76.7
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 2.7e-151 538.9 313 77.0
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 3.5e-151 538.5 314 77.7
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 3.5e-151 538.5 313 77.6
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 6.0e-151 537.7 322 74.2
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 2.3e-150 535.8 319 76.8
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 2.3e-150 535.8 314 77.4
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 3.0e-150 535.4 313 77.6
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 3.9e-150 535.0 308 77.9
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 3.9e-150 535.0 305 79.7
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 8.7e-150 533.9 313 77.3
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 2.5e-149 532.3 310 77.4
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 4.3e-149 531.6 309 76.4
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 5.6e-149 531.2 305 78.0
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 7.3e-149 530.8 317 77.0
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 9.6e-149 530.4 313 77.3
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 2.8e-148 528.9 313 77.0
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 3.6e-148 528.5 312 77.6
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 3.6e-148 528.5 317 76.7
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 1.4e-147 526.6 308 79.5
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 1.4e-147 526.6 314 76.1
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 3.1e-147 525.4 308 78.9
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 5.3e-147 524.6 308 78.2
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 5.3e-147 524.6 314 75.5
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 9.0e-147 523.9 310 75.5
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 1.5e-146 523.1 308 78.2
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 1.5e-146 523.1 318 73.6
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.5e-146 523.1 319 75.2
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 2.0e-146 522.7 308 78.2
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 5.8e-146 521.2 308 78.2
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 7.6e-146 520.8 306 76.5
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 7.6e-146 520.8 308 77.3
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 7.6e-146 520.8 321 74.1
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 7.6e-146 520.8 314 76.4
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 9.9e-146 520.4 313 75.7
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 1.7e-145 519.6 307 77.2
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 2.9e-145 518.8 305 76.7
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 6.4e-145 517.7 310 75.2
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 1.1e-144 516.9 305 76.4
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 5.4e-144 514.6 313 76.0
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 7.1e-144 514.2 309 75.1
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 9.3e-144 513.8 317 74.1
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 1.6e-143 513.1 308 74.0
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 2.7e-143 512.3 310 73.5
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 3.5e-143 511.9 313 75.4
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 8.7e-142 507.3 324 72.5
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 8.7e-142 507.3 310 73.5
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 1.9e-141 506.1 313 76.4
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 2.6e-138 495.7 314 70.4
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 5.8e-138 494.6 312 74.4
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 8.4e-137 490.7 310 72.6
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 4.2e-136 488.4 322 72.0
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 2.7e-135 485.7 323 72.1
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 5.1e-134 481.5 304 71.4
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 3.1e-131 472.2 313 70.6
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 1.3e-129 466.8 308 72.1
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 1.1e-128 463.8 314 70.1
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 2.5e-125 452.6 310 66.1
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 2.8e-124 449.1 339 64.6
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 2.8e-124 449.1 339 64.6
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 6.3e-124 448.0 302 66.6
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 1.5e-122 443.4 306 68.6
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 5.8e-122 441.4 279 71.0
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 6.5e-121 438.0 289 67.1
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 3.9e-118 428.7 306 61.8
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 5.1e-118 428.3 302 62.6
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.2e-116 422.9 451 49.4
Sed0027242 Sechium edule HOM05D005241 ORTHO05D005862 2.2e-116 422.9 231 81.0
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 1.8e-115 419.9 302 63.6
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 5.1e-110 401.7 212 87.7
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 1.5e-106 390.2 311 57.2
Cpa.g.sc450.6 Carica papaya HOM05D005241 ORTHO05D005862 7.7e-98 361.3 211 78.7
Carub.0008s1821 Capsella rubella HOM05D005241 ORTHO05D005862 3.0e-94 349.4 198 79.8
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 2.6e-93 346.3 251 65.3
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.7e-92 343.6 213 75.1
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 3.7e-84 315.8 186 75.8
Prupe.1G095300 Prunus persica HOM05D005241 ORTHO05D005862 7.0e-83 311.6 175 78.9
TPR.G40451 Trifolium pratense HOM05D005241 ORTHO05D005862 3.8e-81 305.8 176 76.1
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 4.0e-78 295.8 302 47.0
Nitab4.5_0000692g0020 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.4e-77 292.7 314 52.2
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 1.1e-48 198.0 208 46.6
MELO3C017513.2 Cucumis melo HOM05D005241 ORTHO05D005862 6.0e-42 175.6 98 76.5
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 5.2e-38 162.5 98 78.6
Glyma.17G067650 Glycine max HOM05D005241 ORTHO05D005862 1.5e-37 161.0 87 77.0
Hund09002 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.5e-32 144.4 94 69.1
Nn8g41235 Nelumbo nucifera HOM05D005241 ORTHO05D005862 4.9e-28 129.4 78 70.5
MBI18_g29570_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 9.3e-27 125.2 91 62.6
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 9.3e-27 125.2 78 76.9
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 1.2e-26 124.8 333 27.6
FAN12G2859 Fragaria x ananassa HOM05D005241 ORTHO05D005862 3.5e-26 123.2 73 74.0
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 4.2e-19 99.8 65 76.9
CBR_g30152 Chara braunii HOM05D010403 ORTHO05D005862 1.4e-14 84.7 159 34.0
CBR_g30241 Chara braunii HOM05D005241 ORTHO05D005862 5.8e-13 79.3 312 24.7
Peaxi162Scf00013g00004 Petunia axillaris HOM05D000090 ORTHO05D001322 7.1e-11 72.4 41 70.7
MBI19_g36862_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.0e-09 68.6 48 58.3
MBI18_g11928_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 3.0e-09 67.0 49 67.3
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 3.1e-06 57.0 43 69.8


User provided reference genes

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