Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 5.2e-204 714.1 356 100.0
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 2.2e-202 708.8 356 98.9
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 7.3e-73 278.5 299 54.2
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 3.5e-59 233.0 275 49.1
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 4.3e-57 226.1 288 46.2
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 3.4e-54 216.5 175 61.1
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.9e-49 200.7 261 45.2
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 6.2e-48 195.7 263 44.1
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 5.2e-47 192.6 272 42.3
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.2e-45 187.2 271 42.4
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 1.1e-44 184.9 291 38.8
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.4e-44 184.5 292 39.0
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 1.4e-44 184.5 299 37.1
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 2.4e-44 183.7 296 39.2
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 3.2e-44 183.3 273 42.1
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.1e-44 183.0 289 37.7
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 9.2e-44 181.8 303 37.6
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 2.1e-43 180.6 283 38.2
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 4.6e-43 179.5 180 51.1
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 6.0e-43 179.1 244 45.5
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 3.0e-42 176.8 189 50.3
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 3.0e-42 176.8 182 51.1
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 5.1e-42 176.0 288 39.2
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 2.5e-41 173.7 303 37.0
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 7.3e-41 172.2 177 50.8
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 9.6e-41 171.8 291 38.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 2.8e-40 170.2 276 38.8
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 6.2e-40 169.1 293 38.2
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 2.4e-39 167.2 298 36.2
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 6.8e-39 165.6 295 35.3
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.5e-38 164.5 289 36.0
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.5e-38 164.5 178 48.3
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 2.0e-38 164.1 289 36.0
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.7e-37 161.0 273 37.7
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.8e-37 159.8 157 50.3
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.8e-37 159.8 288 35.8
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 4.9e-37 159.5 187 46.0
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 6.4e-37 159.1 174 49.4
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 4.2e-36 156.4 175 46.3
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 5.4e-36 156.0 289 35.3
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.2e-35 154.8 177 45.8
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 6.0e-35 152.5 167 45.5
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.3e-34 151.4 287 34.5
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 1.3e-34 151.4 177 48.0
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.3e-34 151.4 303 33.7
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 2.3e-34 150.6 286 33.9
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 5.1e-34 149.4 201 43.3
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 5.1e-34 149.4 181 46.4
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 5.1e-34 149.4 241 39.8
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 1.5e-33 147.9 298 34.2
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 4.3e-33 146.4 193 46.1
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 4.3e-33 146.4 288 34.4
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 5.6e-33 146.0 288 33.3
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 5.6e-33 146.0 184 46.2
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 7.3e-33 145.6 287 31.7
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.1e-32 144.1 138 52.2
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 4.8e-32 142.9 180 41.1
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 1.1e-31 141.7 288 33.0
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 1.1e-31 141.7 288 33.0
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 1.4e-31 141.4 179 41.9
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 3.1e-31 140.2 134 54.5
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 4.0e-31 139.8 288 32.6
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 4.0e-31 139.8 288 32.3
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 5.3e-31 139.4 178 39.3
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 9.0e-31 138.7 292 31.2
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 1.2e-30 138.3 288 33.0
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 1.2e-30 138.3 272 36.0
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 2.0e-30 137.5 282 32.3
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 7.6e-30 135.6 190 38.4
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 1.3e-29 134.8 144 43.1
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 5.4e-28 129.4 153 43.8
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 4.3e-25 119.8 275 30.9
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 5.6e-25 119.4 153 47.1
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 3.6e-24 116.7 98 59.2
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 2.9e-21 107.1 228 32.5
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 8.4e-21 105.5 93 52.7
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.2e-19 101.7 176 38.6
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 5.1e-18 96.3 109 44.0
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 2.5e-17 94.0 224 29.9
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 2.9e-13 80.5 119 42.0
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 4.9e-13 79.7 58 63.8
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 6.0e-11 72.8 140 32.9
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 2.5e-09 67.4 191 28.8
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 3.1e-07 60.5 118 32.2


User provided reference genes

Program Settings