Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 8.8e-204 713.4 356 100.0
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 2.2e-202 708.8 356 98.9
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 7.3e-73 278.5 299 53.8
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 2.0e-59 233.8 275 48.7
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 6.2e-56 222.2 288 45.1
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 5.8e-54 215.7 175 60.0
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 3.6e-48 196.4 261 44.1
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 1.4e-47 194.5 263 43.3
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 1.2e-46 191.4 272 41.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 8.4e-45 185.3 271 41.3
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 1.4e-44 184.5 291 38.5
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 2.4e-44 183.7 292 38.4
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 3.2e-44 183.3 299 37.1
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.2e-44 183.3 289 37.4
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 5.4e-44 182.6 296 38.5
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 7.1e-44 182.2 273 41.4
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.6e-43 181.0 303 37.0
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 3.5e-43 179.9 283 37.8
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 7.8e-43 178.7 180 50.0
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 1.0e-42 178.3 244 44.7
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 5.1e-42 176.0 182 50.0
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 6.6e-42 175.6 189 49.2
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 1.5e-41 174.5 286 38.1
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 5.6e-41 172.6 303 36.3
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 1.6e-40 171.0 177 49.7
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 2.1e-40 170.6 291 37.5
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 4.7e-40 169.5 276 38.0
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 6.2e-40 169.1 293 37.9
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 8.9e-39 165.2 298 35.9
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.5e-38 164.5 295 34.9
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.6e-38 163.7 178 47.8
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 3.4e-38 163.3 289 35.3
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 4.4e-38 162.9 289 35.3
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 2.2e-37 160.6 288 35.4
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 2.9e-37 160.2 157 49.7
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.8e-37 159.8 174 48.9
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.1e-36 158.3 187 44.9
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.9e-36 157.5 273 37.0
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 3.2e-36 156.8 289 34.9
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 9.3e-36 155.2 175 45.1
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 2.1e-35 154.1 177 45.8
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.6e-35 152.9 167 44.9
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 7.8e-35 152.1 303 34.3
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.0e-34 151.8 287 34.1
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 1.7e-34 151.0 286 33.6
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 3.0e-34 150.2 177 47.5
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 1.5e-33 147.9 241 39.0
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 1.9e-33 147.5 183 44.8
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 1.9e-33 147.5 291 33.3
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 2.5e-33 147.1 288 33.3
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 3.3e-33 146.7 201 42.3
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 3.3e-33 146.7 298 33.6
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 9.6e-33 145.2 189 43.9
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.3e-32 144.8 287 31.0
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.3e-32 144.8 184 44.6
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 2.1e-32 144.1 180 41.1
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 4.8e-32 142.9 288 33.0
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 4.8e-32 142.9 288 33.0
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 6.2e-32 142.5 179 41.9
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 6.2e-32 142.5 138 50.7
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 1.8e-31 141.0 288 32.6
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 1.8e-31 141.0 288 32.3
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 3.1e-31 140.2 178 39.3
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 4.0e-31 139.8 292 31.2
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 5.3e-31 139.4 291 32.0
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 6.9e-31 139.0 134 53.0
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 5.8e-30 136.0 272 35.7
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 5.8e-30 136.0 190 38.4
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 5.8e-30 136.0 282 31.9
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 3.8e-29 133.3 173 39.3
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 1.6e-27 127.9 153 43.1
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 2.5e-25 120.6 275 30.9
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 4.3e-25 119.8 153 46.4
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 1.4e-23 114.8 98 58.2
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.7e-21 107.8 228 32.5
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 3.2e-20 103.6 93 50.5
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 7.1e-20 102.4 176 38.6
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.0e-18 98.6 109 45.0
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 1.5e-17 94.7 224 29.9
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 7.6e-14 82.4 119 42.9
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.4e-12 78.2 58 60.3
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 1.2e-11 75.1 140 33.6
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 2.5e-09 67.4 191 28.8
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 6.3e-08 62.8 118 33.1


User provided reference genes

Program Settings